B3 DNA binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_roxburghii | Rroxscaffold_2G00154980 |
| rosa_samantha | Rh2DG015300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 130 |
| AfaI | GTAC | 2 cut(s) | 181, 223 |
| AgsI | TTSAA | 1 cut(s) | 187 |
| AjnI | CCWGG | 1 cut(s) | 175 |
| AluBI | AGCT | 3 cut(s) | 27, 148, 235 |
| AluI | AGCT | 3 cut(s) | 27, 148, 235 |
| Alw26I | GTCTC | 1 cut(s) | 26 |
| AoxI | GGCC | 2 cut(s) | 130, 173 |
| ApeKI | GCWGC | 1 cut(s) | 118 |
| AspS9I | GGNCC | 1 cut(s) | 270 |
| AvaII | GGWCC | 1 cut(s) | 270 |
| BalI | TGGCCA | 1 cut(s) | 132 |
| BbvI | GCAGC | 1 cut(s) | 105 |
| BccI | CCATC | 1 cut(s) | 212 |
| BciT130I | CCWGG | 1 cut(s) | 177 |
| BcoDI | GTCTC | 1 cut(s) | 26 |
| BfaI | CTAG | 1 cut(s) | 274 |
| BisI | GCNGC | 1 cut(s) | 119 |
| BlsI | GCNGC | 1 cut(s) | 120 |
| Bme1390I | CCNGG | 1 cut(s) | 177 |
| Bme18I | GGWCC | 1 cut(s) | 270 |
| BmgT120I | GGNCC | 1 cut(s) | 270 |
| BmrFI | CCNGG | 1 cut(s) | 177 |
| BmsI | GCATC | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 2 cut(s) | 76, 207 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 50, 73, 80, 103 |
| Bse1I | ACTGG | 1 cut(s) | 46 |
| Bse3DI | GCAATG | 1 cut(s) | 234 |
| BseBI | CCWGG | 1 cut(s) | 177 |
| BseDI | CCNNGG | 2 cut(s) | 76, 207 |
| BseGI | GGATG | 1 cut(s) | 203 |
| BseMI | GCAATG | 1 cut(s) | 234 |
| BseMII | CTCAG | 2 cut(s) | 37, 158 |
| BseNI | ACTGG | 1 cut(s) | 46 |
| BseXI | GCAGC | 1 cut(s) | 105 |
| BshFI | GGCC | 2 cut(s) | 132, 175 |
| BsmAI | GTCTC | 1 cut(s) | 26 |
| BsnI | GGCC | 2 cut(s) | 132, 175 |
| Bsp19I | CCATGG | 1 cut(s) | 207 |
| BspANI | GGCC | 2 cut(s) | 132, 175 |
| BspCNI | CTCAG | 2 cut(s) | 36, 157 |
| BsrDI | GCAATG | 1 cut(s) | 234 |
| BsrI | ACTGG | 1 cut(s) | 46 |
| BssECI | CCNNGG | 2 cut(s) | 76, 207 |
| BssT1I | CCWWGG | 1 cut(s) | 207 |
| Bst2UI | CCWGG | 1 cut(s) | 177 |
| BstDEI | CTNAG | 2 cut(s) | 23, 144 |
| BstDSI | CCRYGG | 2 cut(s) | 76, 207 |
| BstF5I | GGATG | 1 cut(s) | 203 |
| BstMAI | GTCTC | 1 cut(s) | 26 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 33, 81 |
| BstNI | CCWGG | 1 cut(s) | 177 |
| BstSCI | CCNGG | 1 cut(s) | 175 |
| BstV1I | GCAGC | 1 cut(s) | 105 |
| BsuRI | GGCC | 2 cut(s) | 132, 175 |
| BtgI | CCRYGG | 2 cut(s) | 76, 207 |
| BtsCI | GGATG | 1 cut(s) | 203 |
| Cfr13I | GGNCC | 1 cut(s) | 270 |
| Csp6I | GTAC | 2 cut(s) | 180, 222 |
| CviAII | CATG | 2 cut(s) | 208, 267 |
| CviJI | RGCY | 7 cut(s) | 27, 75, 132, 148, 175, 212, 235 |
| CviKI_1 | RGCY | 7 cut(s) | 27, 75, 132, 148, 175, 212, 235 |
| CviQI | GTAC | 2 cut(s) | 180, 222 |
| DdeI | CTNAG | 2 cut(s) | 23, 144 |
| EaeI | YGGCCR | 1 cut(s) | 130 |
| Eco130I | CCWWGG | 1 cut(s) | 207 |
| Eco47I | GGWCC | 1 cut(s) | 270 |
| EcoRII | CCWGG | 1 cut(s) | 175 |
| EcoT14I | CCWWGG | 1 cut(s) | 207 |
| ErhI | CCWWGG | 1 cut(s) | 207 |
| FaeI | CATG | 2 cut(s) | 211, 270 |
| FaiI | YATR | 3 cut(s) | 209, 216, 268 |
| FatI | CATG | 2 cut(s) | 207, 266 |
| Fnu4HI | GCNGC | 1 cut(s) | 119 |
| FokI | GGATG | 1 cut(s) | 190 |
| Fsp4HI | GCNGC | 1 cut(s) | 119 |
| FspBI | CTAG | 1 cut(s) | 274 |
| GluI | GCNGC | 1 cut(s) | 119 |
| HaeIII | GGCC | 2 cut(s) | 132, 175 |
| Hin1II | CATG | 2 cut(s) | 211, 270 |
| HindIII | AAGCTT | 1 cut(s) | 233 |
| HinfI | GANTC | 2 cut(s) | 157, 200 |
| Hpy188I | TCNGA | 1 cut(s) | 193 |
| Hpy188III | TCNNGA | 1 cut(s) | 56 |
| HpyCH4V | TGCA | 4 cut(s) | 121, 227, 240, 266 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 33, 81 |
| HpyF3I | CTNAG | 2 cut(s) | 23, 144 |
| Hsp92II | CATG | 2 cut(s) | 211, 270 |
| LmnI | GCTCC | 1 cut(s) | 81 |
| LpnPI | CCDG | 5 cut(s) | 27, 41, 162, 180, 189 |
| Lsp1109I | GCAGC | 1 cut(s) | 105 |
| LweI | GCATC | 1 cut(s) | 24 |
| MaeI | CTAG | 1 cut(s) | 274 |
| MaeIII | GTNAC | 1 cut(s) | 44 |
| MlsI | TGGCCA | 1 cut(s) | 132 |
| MluNI | TGGCCA | 1 cut(s) | 132 |
| Mox20I | TGGCCA | 1 cut(s) | 132 |
| MscI | TGGCCA | 1 cut(s) | 132 |
| Msp20I | TGGCCA | 1 cut(s) | 132 |
| MspR9I | CCNGG | 1 cut(s) | 177 |
| MvaI | CCWGG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 33, 81 |
| NcoI | CCATGG | 1 cut(s) | 207 |
| NlaIII | CATG | 2 cut(s) | 211, 270 |
| PfeI | GAWTC | 2 cut(s) | 157, 200 |
| PkrI | GCNGC | 1 cut(s) | 120 |
| Psp6I | CCWGG | 1 cut(s) | 175 |
| PspGI | CCWGG | 1 cut(s) | 175 |
| PspPI | GGNCC | 1 cut(s) | 270 |
| RsaI | GTAC | 2 cut(s) | 181, 223 |
| RsaNI | GTAC | 2 cut(s) | 180, 222 |
| SatI | GCNGC | 1 cut(s) | 119 |
| Sau96I | GGNCC | 1 cut(s) | 270 |
| ScrFI | CCNGG | 1 cut(s) | 177 |
| SetI | ASST | 5 cut(s) | 29, 68, 150, 237, 275 |
| SfaNI | GCATC | 1 cut(s) | 24 |
| SinI | GGWCC | 1 cut(s) | 270 |
| SspMI | CTAG | 1 cut(s) | 274 |
| StyD4I | CCNGG | 1 cut(s) | 175 |
| StyI | CCWWGG | 1 cut(s) | 207 |
| TfiI | GAWTC | 2 cut(s) | 157, 200 |
| TseI | GCWGC | 1 cut(s) | 118 |
| TspDTI | ATGAA | 1 cut(s) | 245 |
| TspGWI | ACGGA | 1 cut(s) | 258 |
| VpaK11BI | GGWCC | 1 cut(s) | 270 |
| XspI | CTAG | 1 cut(s) | 274 |