Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0012752

Physical Location & Seq

Genomic Coordinates Reverse (-)

1160375 .. 1164864

Gene Structure 4490 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG019900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGATGCTCACTTCCCTCTCTCATATTCAATCCACTAATGTCTATTCCACTCCATCAACCCTTCCTATCTCTCCTCCCATTCTTACATCTTCGTCTTCTTCCTTTCTGTCACTTGAGCCATCTTCTCACCGTCTCTCTCTGCATGTCTATAGCAATGACCGTTTGAGGATCGCCCACAAATCCAACGGACTGAAGTTGAGTTGTTCTTTAAAGGAACCGCCTTTGAAGGTTATGATTTCTGGTGCACCGGCTTCTGGGAAAGGAACTCAGTGTGAATTGATTGTCAAGAAGTTTGGATTGGTGCACATATCAACAGGGGACCTTCTAAGAGCTGAAGTGTCATCTGGGACTGAGATTGGGAACAAAGCCAAAGAGTTCATGAATGCTGGCAAGTTGGTTCCTGATGAAATTGTCACAGCTATGGTGACGTCACGATTATCACGAGAAGATGCAAAAGAAAATGGGTGGCTTCTGGATGGATATCCGCGAAGTTTTAGCCAAGCACAAAGTTTGCAGAGTCTGAAGATAATACCAGATGTTTACATTGTCTTAGATGTTCCTGATGAAATTCTAATCGACAGATGTGTTGGAAGGAGGCTAGACCCAGTTACAAAGAAGATTTACCATGTCAAAAATTTCCCACCAGAGACTGAGGAAATTAAAGCAAGACTTACTACCCGGCCTGATGACACTGAGGAAAAAGTGAAGTCGCGTCTTGAAATATACAAGAAAAATGCAGATGCAATCTTATCCACTTACTCAAACATAATGAAAAGGATTGATGGAAACCATCCTAAAGAAGTAATTTTTGGAGAAATAGACTCCATTCTGTCTCAAGTGCTGAATGATAAAGAAAAGAAGAGGAAATTAGGGAGTAGCTTAAGTCAGTCATCTTCAGTCCAGGATAACTGGAGGGGAATTCCTACTAAATTGAATAACATCCCACACTCTAGAGACATCAGGAACTATTTTTATGATGATGTACTGCAAGCCACCAAAAGATCTATAAATGATGGAGGAATTCGATTAAAGGTGGAGATTAATATTCCAGAGCTGAACCCAGAAATGGATGTTTATCGAATAGGTACCTTAATGGAACTTGTTCGAACTCTAGCTCTTTCATTTGCTGATGATGGGAAATCTGTCAAGGTTTGTGTTCAAGGCTCTATGGGGGAAGGTGCCCTTGCTGGAATGCCATTGCAGCTTGCTGGGACTCGACAGATCTTAGAGTACATGGACTGGGGTGAATATGGGGCCATGGGGACGTTTATCAAGATTGGTGCTATAGGTGCTAAATATGTAGATGAGACTGATGACCTGTTTATCTTAGTAGCTCCTCAGAATGCTGTCGGGAATTGTATTATTGAGGATTTGCAAGCTATGACTGATGCTGCTGGGGACCGACCAGTAATTCTTATCAATCCTAGGCTCAAGGATCTTCCTGCTTCAAGTGGAATTATGCAAACCATGGGTCGTGACAAGAGGTTGAAGTATGCTGCAACGTTTGAAAATTGCTATTTCTTCCGGCTTCTCTACTTTGCAGGAACCCAATATCCAATTATGGGTGCTCTAAGGATGTCTTACCCTTATCGTTATGAATTGTACAAGAGGGTGAATGACCCTTCTGGGAAGGAGAAGTATGTAATCTTGTCTACGTATCCTAAAAAGCCAACTATTGATGAGGTGAATGATGCTTTTGAAGGAAAGCCTAGAAATGAAAATAAGAAAGCTGTGGGAATTTGGGGATTCCTAAGTGGTATATTGCAAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004017 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009123 GO:0009165 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009941 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016776 GO:0018130 GO:0019205 GO:0019438 GO:0019637 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034357 GO:0034641 GO:0034654 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046940 GO:0050145 GO:0055035 GO:0055086 GO:0071704 GO:0090407 GO:1901293 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00230 ko00730 ko01100 ko01110 ko01130 map00230 map00730 map01100 map01110 map01130

Pfam Domains

Protein Families

ADK DUF1995

Protein Analysis

590

Amino Acids

65.75

Weight (kDa)

8.68

Isoelectric Point (pI)

41.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_18	PF13238	77 - 205	5.4e-06	AAA domain
ADK	PF00406	79 - 255	3.7e-49	Adenylate kinase
AAA_17	PF13207	81 - 199	5.5e-26	AAA domain
DUF1995	PF09353	321 - 563	6.6e-39	Domain of unknown function (DUF1995)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G35170 AT5G35170
fragaria_vesca	FvH4_1g01570
malus_domestica	MD02G1012500.v1.1
prunus_persica	Prupe.7G253500_v2.0.a1 Prupe.7G253500_v2.0.a1 Prupe.7G253500_v2.0.a1
pyrus_communis	pycom02g01170
rosa_chinensis	RchiOBHm_Chr2g0086531
rosa_laevigata	RLG00000015764
rosa_multiflora	Rmu_sc0027781.1_g000001
rosa_roxburghii	Rroxscaffold_2G00154470
rosa_rugosa	Rorug01G0467700
rosa_samantha	Rh2AG018600 Rh2BG018200 Rh2CG019100 Rh2DG019900
rosa_wichuraiana	Rw2G001560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	431
Acc65I	GGTACC	1 cut(s)	1085
AccB1I	GGYRCC	2 cut(s)	1085, 1178
AccI	GTMKAC	1 cut(s)	1652
AccII	CGCG	2 cut(s)	487, 712
AciI	CCGC	2 cut(s)	218, 485
AclI	AACGTT	1 cut(s)	1502
AclWI	GGATC	2 cut(s)	176, 1443
AcsI	RAATTY	5 cut(s)	567, 634, 918, 1020, 1737
AcuI	CTGAAG	4 cut(s)	212, 354, 542, 879
AcyI	GRCGYC	1 cut(s)	428
AfaI	GTAC	4 cut(s)	984, 1087, 1232, 1604
AfiI	CCNNNNNNNGG	3 cut(s)	254, 1066, 1562
AflII	CTTAAG	1 cut(s)	880
AgsI	TTSAA	9 cut(s)	29, 226, 719, 934, 1160, 1449, 1489, 1508, 1700
AjnI	CCWGG	1 cut(s)	900
AjuI	GAANNNNNNNTTGG	4 cut(s)	281, 313, 792, 824
AloI	GAACNNNNNNTCC	2 cut(s)	1537, 1569
AluBI	AGCT	9 cut(s)	332, 419, 879, 1054, 1115, 1204, 1334, 1379, 1730
AluI	AGCT	9 cut(s)	332, 419, 879, 1054, 1115, 1204, 1334, 1379, 1730
Alw21I	GWGCWC	3 cut(s)	247, 306, 1570
Alw26I	GTCTC	5 cut(s)	137, 641, 837, 948, 1301
Alw44I	GTGCAC	2 cut(s)	243, 302
AlwI	GGATC	2 cut(s)	176, 1443
AlwNI	CAGNNNCTG	2 cut(s)	520, 650
AoxI	GGCC	2 cut(s)	680, 1254
ApaLI	GTGCAC	2 cut(s)	243, 302
ApeKI	GCWGC	3 cut(s)	1201, 1391, 1496
ApoI	RAATTY	5 cut(s)	567, 634, 918, 1020, 1737
ArsI	GACNNNNNNTTYG	2 cut(s)	1456, 1488
AseI	ATTAAT	1 cut(s)	1041
Asp700I	GAANNNNTTC	1 cut(s)	1101
Asp718I	GGTACC	1 cut(s)	1085
AspA2I	CCTAGG	1 cut(s)	1424
AspS9I	GGNCC	3 cut(s)	319, 1254, 1399
AsuC2I	CCSGG	1 cut(s)	679
AsuHPI	GGTGA	5 cut(s)	119, 436, 1256, 1624, 1696
AsuII	TTCGAA	1 cut(s)	1105
AvaII	GGWCC	2 cut(s)	319, 1399
AvrII	CCTAGG	1 cut(s)	1424
BaeGI	GKGCMC	3 cut(s)	247, 306, 1183
BanI	GGYRCC	2 cut(s)	1085, 1178
BauI	CACGAG	1 cut(s)	441
BbsI	GAAGAC	1 cut(s)	87
Bbv12I	GWGCWC	3 cut(s)	247, 306, 1570
BbvI	GCAGC	3 cut(s)	1213, 1378, 1483
BccI	CCATC	7 cut(s)	61, 127, 470, 776, 798, 1007, 1127
BciT130I	CCWGG	1 cut(s)	902
BciVI	GTATCC	1 cut(s)	1668
BcnI	CCSGG	1 cut(s)	679
BcoDI	GTCTC	5 cut(s)	137, 641, 837, 948, 1301
BfaI	CTAG	5 cut(s)	599, 951, 1112, 1425, 1710
BfmI	CTRYAG	2 cut(s)	148, 1284
BfrI	CTTAAG	1 cut(s)	880
BfuI	GTATCC	1 cut(s)	1668
BglII	AGATCT	2 cut(s)	1001, 1221
BisI	GCNGC	3 cut(s)	1202, 1392, 1497
BlnI	CCTAGG	1 cut(s)	1424
BlsI	GCNGC	3 cut(s)	1203, 1393, 1498
Bme1390I	CCNGG	2 cut(s)	679, 902
Bme18I	GGWCC	2 cut(s)	319, 1399
BmgT120I	GGNCC	3 cut(s)	319, 1254, 1399
BmiI	GGNNCC	8 cut(s)	216, 320, 399, 1087, 1180, 1255, 1400, 1546
BmrFI	CCNGG	2 cut(s)	679, 902
BmrI	ACTGGG	2 cut(s)	599, 1249
BmsI	GCATC	4 cut(s)	439, 730, 1378, 1681
BmuI	ACTGGG	2 cut(s)	599, 1249
BpiI	GAAGAC	1 cut(s)	87
BpmI	CTGGAG	1 cut(s)	931
Bpu14I	TTCGAA	1 cut(s)	1105
BpuEI	CTTGAG	3 cut(s)	134, 819, 1415
BpuMI	CCSGG	1 cut(s)	679
BsaAI	YACGTR	1 cut(s)	1656
BsaBI	GATNNNNATC	2 cut(s)	480, 1074
BsaHI	GRCGYC	1 cut(s)	428
BsaJI	CCNNGG	3 cut(s)	1257, 1424, 1467
Bsc4I	CCNNNNNNNGG	3 cut(s)	254, 1066, 1562
Bse118I	RCCGGY	1 cut(s)	247
Bse1I	ACTGG	4 cut(s)	605, 914, 1244, 1406
Bse3DI	GCAATG	2 cut(s)	160, 1196
Bse8I	GATNNNNATC	2 cut(s)	480, 1074
BseBI	CCWGG	1 cut(s)	902
BseDI	CCNNGG	3 cut(s)	1257, 1424, 1467
BseGI	GGATG	5 cut(s)	481, 790, 939, 1075, 1581
BseJI	GATNNNNATC	2 cut(s)	480, 1074
BseLI	CCNNNNNNNGG	3 cut(s)	254, 1066, 1562
BseMI	GCAATG	2 cut(s)	160, 1196
BseMII	CTCAG	5 cut(s)	281, 342, 642, 684, 1352
BseNI	ACTGG	4 cut(s)	605, 914, 1244, 1406
BseRI	GAGGAG	2 cut(s)	63, 1326
BseSI	GKGCMC	3 cut(s)	247, 306, 1183
BseXI	GCAGC	3 cut(s)	1213, 1378, 1483
BseYI	CCCAGC	2 cut(s)	1208, 1394
Bsh1236I	CGCG	2 cut(s)	487, 712
BshFI	GGCC	2 cut(s)	682, 1256
BshNI	GGYRCC	2 cut(s)	1085, 1178
BsiHKAI	GWGCWC	3 cut(s)	247, 306, 1570
BsiSI	CCGG	3 cut(s)	248, 679, 1525
BslFI	GGGAC	5 cut(s)	332, 361, 1225, 1276, 1412
BslI	CCNNNNNNNGG	3 cut(s)	254, 1066, 1562
BsmAI	GTCTC	5 cut(s)	137, 641, 837, 948, 1301
BsmBI	CGTCTC	1 cut(s)	137
BsmFI	GGGAC	5 cut(s)	332, 361, 1225, 1276, 1412
BsmI	GAATGC	3 cut(s)	388, 1197, 1348
BsnI	GGCC	2 cut(s)	682, 1256
Bsp119I	TTCGAA	1 cut(s)	1105
Bsp1286I	GDGCHC	4 cut(s)	247, 306, 1183, 1570
Bsp1407I	TGTACA	1 cut(s)	1602
Bsp143I	GATC	4 cut(s)	168, 1001, 1221, 1435
Bsp19I	CCATGG	2 cut(s)	1257, 1467
BspACI	CCGC	2 cut(s)	218, 485
BspANI	GGCC	2 cut(s)	682, 1256
BspCNI	CTCAG	5 cut(s)	280, 343, 643, 685, 1351
BspFNI	CGCG	2 cut(s)	487, 712
BspHI	TCATGA	1 cut(s)	378
BspLI	GGNNCC	8 cut(s)	216, 320, 399, 1087, 1180, 1255, 1400, 1546
BspPI	GGATC	2 cut(s)	176, 1443
BspT104I	TTCGAA	1 cut(s)	1105
BspT107I	GGYRCC	2 cut(s)	1085, 1178
BspTI	CTTAAG	1 cut(s)	880
BsrDI	GCAATG	2 cut(s)	160, 1196
BsrFI	RCCGGY	1 cut(s)	247
BsrGI	TGTACA	1 cut(s)	1602
BsrI	ACTGG	4 cut(s)	605, 914, 1244, 1406
BssAI	RCCGGY	1 cut(s)	247
BssECI	CCNNGG	3 cut(s)	1257, 1424, 1467
BssMI	GATC	4 cut(s)	168, 1001, 1221, 1435
BssNI	GRCGYC	1 cut(s)	428
BssSI	CACGAG	1 cut(s)	441
BssT1I	CCWWGG	3 cut(s)	1257, 1424, 1467
Bst2BI	CACGAG	1 cut(s)	441
Bst2UI	CCWGG	1 cut(s)	902
Bst4CI	ACNGT	2 cut(s)	131, 161
Bst6I	CTCTTC	1 cut(s)	854
BstACI	GRCGYC	1 cut(s)	428
BstAFI	CTTAAG	1 cut(s)	880
BstAUI	TGTACA	1 cut(s)	1602
BstBAI	YACGTR	1 cut(s)	1656
BstBI	TTCGAA	1 cut(s)	1105
BstC8I	GCNNGC	4 cut(s)	388, 990, 1206, 1377
BstDSI	CCRYGG	2 cut(s)	1257, 1467
BstF5I	GGATG	5 cut(s)	481, 790, 939, 1075, 1581
BstFNI	CGCG	2 cut(s)	487, 712
BstKTI	GATC	4 cut(s)	171, 1004, 1224, 1438
BstMAI	GTCTC	5 cut(s)	137, 641, 837, 948, 1301
BstMBI	GATC	4 cut(s)	168, 1001, 1221, 1435
BstMWI	GCNNNNNNNGC	2 cut(s)	1201, 1289
BstNI	CCWGG	1 cut(s)	902
BstNSI	RCATGY	1 cut(s)	146
BstSCI	CCNGG	2 cut(s)	677, 900
BstSFI	CTRYAG	2 cut(s)	148, 1284
BstSLI	GKGCMC	3 cut(s)	247, 306, 1183
BstSNI	TACGTA	1 cut(s)	1656
BstUI	CGCG	2 cut(s)	487, 712
BstV1I	GCAGC	3 cut(s)	1213, 1378, 1483
BstV2I	GAAGAC	1 cut(s)	87
BstX2I	RGATCY	3 cut(s)	1001, 1221, 1435
BstYI	RGATCY	3 cut(s)	1001, 1221, 1435
BsuI	GTATCC	1 cut(s)	1668
BsuRI	GGCC	2 cut(s)	682, 1256
BtgI	CCRYGG	2 cut(s)	1257, 1467
BtsCI	GGATG	5 cut(s)	481, 790, 939, 1075, 1581
BtsIMutI	CAGTG	2 cut(s)	275, 690
Cac8I	GCNNGC	4 cut(s)	388, 990, 1206, 1377
CaiI	CAGNNNCTG	2 cut(s)	520, 650
CciI	TCATGA	1 cut(s)	378
Cfr10I	RCCGGY	1 cut(s)	247
Cfr13I	GGNCC	3 cut(s)	319, 1254, 1399
CseI	GACGC	1 cut(s)	701
Csp6I	GTAC	4 cut(s)	983, 1086, 1231, 1603
CviAII	CATG	6 cut(s)	143, 379, 626, 1234, 1258, 1468
CviQI	GTAC	4 cut(s)	983, 1086, 1231, 1603
DpnI	GATC	4 cut(s)	170, 1003, 1223, 1437
DpnII	GATC	4 cut(s)	168, 1001, 1221, 1435
DraI	TTTAAA	1 cut(s)	210
Eam1104I	CTCTTC	1 cut(s)	854
EarI	CTCTTC	1 cut(s)	854
Eco105I	TACGTA	1 cut(s)	1656
Eco130I	CCWWGG	3 cut(s)	1257, 1424, 1467
Eco32I	GATATC	1 cut(s)	482
Eco47I	GGWCC	2 cut(s)	319, 1399
Eco57I	CTGAAG	4 cut(s)	212, 354, 542, 879
EcoO109I	RGGNCCY	1 cut(s)	319
EcoRI	GAATTC	2 cut(s)	918, 1020
EcoRII	CCWGG	1 cut(s)	900
EcoRV	GATATC	1 cut(s)	482
EcoT14I	CCWWGG	3 cut(s)	1257, 1424, 1467
ErhI	CCWWGG	3 cut(s)	1257, 1424, 1467
Esp3I	CGTCTC	1 cut(s)	137
FaeI	CATG	6 cut(s)	146, 382, 629, 1237, 1261, 1471
FalI	AAGNNNNNCTT	6 cut(s)	654, 686, 1167, 1199, 1564, 1596
FaqI	GGGAC	5 cut(s)	332, 361, 1225, 1276, 1412
FatI	CATG	6 cut(s)	142, 378, 625, 1233, 1257, 1467
FblI	GTMKAC	1 cut(s)	1652
Fnu4HI	GCNGC	3 cut(s)	1202, 1392, 1497
FokI	GGATG	5 cut(s)	488, 777, 926, 1082, 1588
Fsp4HI	GCNGC	3 cut(s)	1202, 1392, 1497
FspBI	CTAG	5 cut(s)	599, 951, 1112, 1425, 1710
GluI	GCNGC	3 cut(s)	1202, 1392, 1497
GsaI	CCCAGC	2 cut(s)	1212, 1398
GsuI	CTGGAG	1 cut(s)	931
HaeIII	GGCC	2 cut(s)	682, 1256
HapII	CCGG	3 cut(s)	248, 679, 1525
HgaI	GACGC	1 cut(s)	701
Hin1I	GRCGYC	1 cut(s)	428
Hin1II	CATG	6 cut(s)	146, 382, 629, 1237, 1261, 1471
HinfI	GANTC	4 cut(s)	517, 821, 1213, 1746
HpaII	CCGG	3 cut(s)	248, 679, 1525
HphI	GGTGA	5 cut(s)	119, 436, 1256, 1624, 1696
Hpy166II	GTNNAC	4 cut(s)	245, 304, 541, 1653
Hpy188I	TCNGA	2 cut(s)	522, 1341
Hpy8I	GTNNAC	4 cut(s)	245, 304, 541, 1653
HpyAV	CCTTC	8 cut(s)	71, 220, 332, 585, 1169, 1624, 1632, 1694
HpyCH4III	ACNGT	2 cut(s)	131, 161
HpyCH4IV	ACGT	4 cut(s)	428, 1265, 1502, 1655
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1201, 1289
HpySE526I	ACGT	4 cut(s)	428, 1265, 1502, 1655
Hsp92I	GRCGYC	1 cut(s)	428
Hsp92II	CATG	6 cut(s)	146, 382, 629, 1237, 1261, 1471
KpnI	GGTACC	1 cut(s)	1089
Kzo9I	GATC	4 cut(s)	168, 1001, 1221, 1435
LmnI	GCTCC	1 cut(s)	1339
Lsp1109I	GCAGC	3 cut(s)	1213, 1378, 1483
LweI	GCATC	4 cut(s)	439, 730, 1378, 1681
MaeI	CTAG	5 cut(s)	599, 951, 1112, 1425, 1710
MaeII	ACGT	4 cut(s)	428, 1265, 1502, 1655
MaeIII	GTNAC	6 cut(s)	108, 412, 424, 429, 607, 1475
MalI	GATC	4 cut(s)	170, 1003, 1223, 1437
MboI	GATC	4 cut(s)	168, 1001, 1221, 1435
MflI	RGATCY	3 cut(s)	1001, 1221, 1435
MhlI	GDGCHC	4 cut(s)	247, 306, 1183, 1570
MlyI	GAGTC	3 cut(s)	526, 815, 1207
MmeI	TCCRAC	2 cut(s)	207, 568
MroXI	GAANNNNTTC	1 cut(s)	1101
MseI	TTAA	6 cut(s)	209, 660, 881, 1028, 1041, 1091
MslI	CAYNNNNRTG	1 cut(s)	419
MspCI	CTTAAG	1 cut(s)	880
MspI	CCGG	3 cut(s)	248, 679, 1525
MspR9I	CCNGG	2 cut(s)	679, 902
Mva1269I	GAATGC	3 cut(s)	388, 1197, 1348
MvaI	CCWGG	1 cut(s)	902
MvnI	CGCG	2 cut(s)	487, 712
MwoI	GCNNNNNNNGC	2 cut(s)	1201, 1289
NciI	CCSGG	1 cut(s)	679
NcoI	CCATGG	2 cut(s)	1257, 1467
NdeII	GATC	4 cut(s)	168, 1001, 1221, 1435
NlaIII	CATG	6 cut(s)	146, 382, 629, 1237, 1261, 1471
NlaIV	GGNNCC	8 cut(s)	216, 320, 399, 1087, 1180, 1255, 1400, 1546
NmuCI	GTSAC	5 cut(s)	108, 412, 424, 429, 1475
NspI	RCATGY	1 cut(s)	146
NspV	TTCGAA	1 cut(s)	1105
PagI	TCATGA	1 cut(s)	378
PcsI	WCGNNNNNNNCGW	1 cut(s)	439
PctI	GAATGC	3 cut(s)	388, 1197, 1348
PdmI	GAANNNNTTC	1 cut(s)	1101
PfeI	GAWTC	1 cut(s)	1746
PfoI	TCCNGGA	1 cut(s)	900
PkrI	GCNGC	3 cut(s)	1203, 1393, 1498
PleI	GAGTC	3 cut(s)	525, 815, 1207
PpsI	GAGTC	3 cut(s)	525, 815, 1207
Ppu21I	YACGTR	1 cut(s)	1656
PpuMI	RGGWCCY	1 cut(s)	319
PshBI	ATTAAT	1 cut(s)	1041
Psp1406I	AACGTT	1 cut(s)	1502
Psp5II	RGGWCCY	1 cut(s)	319
Psp6I	CCWGG	1 cut(s)	900
PspFI	CCCAGC	2 cut(s)	1208, 1394
PspGI	CCWGG	1 cut(s)	900
PspN4I	GGNNCC	8 cut(s)	216, 320, 399, 1087, 1180, 1255, 1400, 1546
PspPI	GGNCC	3 cut(s)	319, 1254, 1399
PspPPI	RGGWCCY	1 cut(s)	319
PstNI	CAGNNNCTG	2 cut(s)	520, 650
PsuI	RGATCY	3 cut(s)	1001, 1221, 1435
RsaI	GTAC	4 cut(s)	984, 1087, 1232, 1604
RsaNI	GTAC	4 cut(s)	983, 1086, 1231, 1603
RseI	CAYNNNNRTG	1 cut(s)	419
SaqAI	TTAA	6 cut(s)	209, 660, 881, 1028, 1041, 1091
SatI	GCNGC	3 cut(s)	1202, 1392, 1497
Sau3AI	GATC	4 cut(s)	168, 1001, 1221, 1435
Sau96I	GGNCC	3 cut(s)	319, 1254, 1399
SchI	GAGTC	3 cut(s)	526, 815, 1207
ScrFI	CCNGG	2 cut(s)	679, 902
SduI	GDGCHC	4 cut(s)	247, 306, 1183, 1570
SfaNI	GCATC	4 cut(s)	439, 730, 1378, 1681
SfcI	CTRYAG	2 cut(s)	148, 1284
SfuI	TTCGAA	1 cut(s)	1105
SinI	GGWCC	2 cut(s)	319, 1399
SmiMI	CAYNNNNRTG	1 cut(s)	419
SmlI	CTYRAG	4 cut(s)	113, 834, 880, 1430
SmoI	CTYRAG	4 cut(s)	113, 834, 880, 1430
SnaBI	TACGTA	1 cut(s)	1656
SsiI	CCGC	2 cut(s)	218, 485
SspI	AATATT	1 cut(s)	1045
SspMI	CTAG	5 cut(s)	599, 951, 1112, 1425, 1710
StyD4I	CCNGG	2 cut(s)	677, 900
StyI	CCWWGG	3 cut(s)	1257, 1424, 1467
TaaI	ACNGT	2 cut(s)	131, 161
TaiI	ACGT	4 cut(s)	431, 1268, 1505, 1658
TaqI	TCGA	5 cut(s)	576, 1024, 1078, 1105, 1216
TaqII	GACCGA	1 cut(s)	1416
TatI	WGTACW	3 cut(s)	982, 1230, 1602
TfiI	GAWTC	1 cut(s)	1746
Tru1I	TTAA	6 cut(s)	209, 660, 881, 1028, 1041, 1091
Tru9I	TTAA	6 cut(s)	209, 660, 881, 1028, 1041, 1091
TscAI	CASTG	2 cut(s)	275, 697
TseFI	GTSAC	5 cut(s)	108, 412, 424, 429, 1475
TseI	GCWGC	3 cut(s)	1201, 1391, 1496
Tsp45I	GTSAC	5 cut(s)	108, 412, 424, 429, 1475
TspDTI	ATGAA	8 cut(s)	367, 395, 420, 579, 785, 1110, 1611, 1731
TspGWI	ACGGA	1 cut(s)	201
TspRI	CASTG	2 cut(s)	275, 697
Vha464I	CTTAAG	1 cut(s)	880
VneI	GTGCAC	2 cut(s)	243, 302
VpaK11BI	GGWCC	2 cut(s)	319, 1399
VspI	ATTAAT	1 cut(s)	1041
XapI	RAATTY	5 cut(s)	567, 634, 918, 1020, 1737
XbaI	TCTAGA	1 cut(s)	950
XceI	RCATGY	1 cut(s)	146
XmaJI	CCTAGG	1 cut(s)	1424
XmiI	GTMKAC	1 cut(s)	1652
XmnI	GAANNNNTTC	1 cut(s)	1101
XspI	CTAG	5 cut(s)	599, 951, 1112, 1425, 1710
ZraI	GACGTC	1 cut(s)	429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.