Rh2DG382600

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
55206485 .. 55207662
1178 bp
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UTR
Exon/CDS
Intron
Rh2DG382600.1

Sequence Viewer

Length: 210 bp
ATGCTTGTTGTACCACTGTCTGACAATCTGGAAGCATTTCAGCTTGAAGATATGAAAATATTGAACAACGTCGAAGGGTATCTTCATATCTGCAGAATAACTCTCAGTTCCATAGAAGGGTTGAGCAAGTCTCATCGAGCTGTTCTGTGTATTGGTTTAAATGAATGCGGCAATGTTTCAAAAGGTGAGGCCTCTGGTTTCAGAGAATGA
Functional Annotation

Protein Analysis

69

Amino Acids

7.56

Weight (kDa)

5.25

Isoelectric Point (pI)

34.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0033882)

Species Orthologous Gene IDs
rosa_samantha Rh2AG359800 Rh2DG382600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 168
AfaI GTAC 1 cut(s) 12
AfiI CCNNNNNNNGG 1 cut(s) 117
AgsI TTSAA 3 cut(s) 47, 64, 180
AluBI AGCT 2 cut(s) 43, 140
AluI AGCT 2 cut(s) 43, 140
Alw26I GTCTC 1 cut(s) 135
AoxI GGCC 1 cut(s) 189
Asp700I GAANNNNTTC 1 cut(s) 36
AsuHPI GGTGA 1 cut(s) 197
BcoDI GTCTC 1 cut(s) 135
BfmI CTRYAG 1 cut(s) 91
BisI GCNGC 1 cut(s) 169
BlsI GCNGC 1 cut(s) 170
BplI GAGNNNNNCTC 2 cut(s) 115, 147
Bsc4I CCNNNNNNNGG 1 cut(s) 117
Bse3DI GCAATG 1 cut(s) 178
BseLI CCNNNNNNNGG 1 cut(s) 117
BseMI GCAATG 1 cut(s) 178
BseMII CTCAG 1 cut(s) 118
BshFI GGCC 1 cut(s) 191
BslI CCNNNNNNNGG 1 cut(s) 117
BsmAI GTCTC 1 cut(s) 135
BsmI GAATGC 1 cut(s) 170
BsnI GGCC 1 cut(s) 191
BspACI CCGC 1 cut(s) 168
BspANI GGCC 1 cut(s) 191
BspCNI CTCAG 1 cut(s) 117
BspMAI CTGCAG 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 178
Bst4CI ACNGT 1 cut(s) 18
BstDEI CTNAG 1 cut(s) 104
BstMAI GTCTC 1 cut(s) 135
BstSFI CTRYAG 1 cut(s) 91
BsuRI GGCC 1 cut(s) 191
BtsIMutI CAGTG 1 cut(s) 14
Csp6I GTAC 1 cut(s) 11
CviJI RGCY 3 cut(s) 43, 140, 191
CviKI_1 RGCY 3 cut(s) 43, 140, 191
CviQI GTAC 1 cut(s) 11
DdeI CTNAG 1 cut(s) 104
DraI TTTAAA 1 cut(s) 159
Eco147I AGGCCT 1 cut(s) 191
FaiI YATR 3 cut(s) 53, 87, 113
FalI AAGNNNNNCTT 2 cut(s) 66, 98
Fnu4HI GCNGC 1 cut(s) 169
Fsp4HI GCNGC 1 cut(s) 169
GluI GCNGC 1 cut(s) 169
HaeIII GGCC 1 cut(s) 191
HphI GGTGA 1 cut(s) 197
Hpy188I TCNGA 2 cut(s) 22, 203
Hpy188III TCNNGA 1 cut(s) 29
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 2 cut(s) 68, 110
HpyCH4III ACNGT 1 cut(s) 18
HpyCH4IV ACGT 1 cut(s) 69
HpyCH4V TGCA 1 cut(s) 93
HpyF3I CTNAG 1 cut(s) 104
HpySE526I ACGT 1 cut(s) 69
LpnPI CCDG 2 cut(s) 14, 180
MaeII ACGT 1 cut(s) 69
MboII GAAGA 2 cut(s) 59, 74
MnlI CCTC 2 cut(s) 181, 202
MroXI GAANNNNTTC 1 cut(s) 36
MseI TTAA 1 cut(s) 158
Mva1269I GAATGC 1 cut(s) 170
PceI AGGCCT 1 cut(s) 191
PctI GAATGC 1 cut(s) 170
PdmI GAANNNNTTC 1 cut(s) 36
PkrI GCNGC 1 cut(s) 170
PstI CTGCAG 1 cut(s) 95
RsaI GTAC 1 cut(s) 12
RsaNI GTAC 1 cut(s) 11
SaqAI TTAA 1 cut(s) 158
SatI GCNGC 1 cut(s) 169
SetI ASST 4 cut(s) 45, 72, 142, 187
SfcI CTRYAG 1 cut(s) 91
SgeI CNNG 5 cut(s) 17, 41, 56, 139, 149
SseBI AGGCCT 1 cut(s) 191
SsiI CCGC 1 cut(s) 168
SspI AATATT 1 cut(s) 60
StuI AGGCCT 1 cut(s) 191
TaaI ACNGT 1 cut(s) 18
TaiI ACGT 1 cut(s) 72
TaqI TCGA 2 cut(s) 72, 136
TauI GCSGC 1 cut(s) 171
Tru1I TTAA 1 cut(s) 158
Tru9I TTAA 1 cut(s) 158
TscAI CASTG 1 cut(s) 21
TspDTI ATGAA 3 cut(s) 68, 74, 177
TspRI CASTG 1 cut(s) 21
XmnI GAANNNNTTC 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.