FAR1 DNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0084681 |
| rosa_samantha | Rh3BG249700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 248 |
| AclWI | GGATC | 1 cut(s) | 315 |
| AcsI | RAATTY | 1 cut(s) | 102 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 76 |
| AjnI | CCWGG | 1 cut(s) | 400 |
| AluBI | AGCT | 1 cut(s) | 398 |
| AluI | AGCT | 1 cut(s) | 398 |
| AlwI | GGATC | 1 cut(s) | 315 |
| AoxI | GGCC | 3 cut(s) | 67, 219, 228 |
| ApoI | RAATTY | 1 cut(s) | 102 |
| AspS9I | GGNCC | 2 cut(s) | 220, 229 |
| AsuHPI | GGTGA | 2 cut(s) | 22, 271 |
| BccI | CCATC | 3 cut(s) | 240, 259, 382 |
| BciT130I | CCWGG | 1 cut(s) | 402 |
| BclI | TGATCA | 1 cut(s) | 148 |
| BfaI | CTAG | 1 cut(s) | 170 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 227 |
| Bme1390I | CCNGG | 1 cut(s) | 402 |
| BmgT120I | GGNCC | 2 cut(s) | 220, 229 |
| BmrFI | CCNGG | 1 cut(s) | 402 |
| BmrI | ACTGGG | 1 cut(s) | 33 |
| BmuI | ACTGGG | 1 cut(s) | 33 |
| BpmI | CTGGAG | 1 cut(s) | 384 |
| BpuEI | CTTGAG | 1 cut(s) | 174 |
| BsaBI | GATNNNNATC | 1 cut(s) | 312 |
| BsaJI | CCNNGG | 1 cut(s) | 401 |
| BsaWI | WCCGGW | 1 cut(s) | 109 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 76 |
| Bse1I | ACTGG | 2 cut(s) | 28, 211 |
| Bse3DI | GCAATG | 1 cut(s) | 164 |
| Bse8I | GATNNNNATC | 1 cut(s) | 312 |
| BseBI | CCWGG | 1 cut(s) | 402 |
| BseDI | CCNNGG | 1 cut(s) | 401 |
| BseGI | GGATG | 1 cut(s) | 316 |
| BseJI | GATNNNNATC | 1 cut(s) | 312 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BseMI | GCAATG | 1 cut(s) | 164 |
| BseNI | ACTGG | 2 cut(s) | 28, 211 |
| BseRI | GAGGAG | 1 cut(s) | 104 |
| Bsh1236I | CGCG | 1 cut(s) | 248 |
| BshFI | GGCC | 3 cut(s) | 69, 221, 230 |
| BsiSI | CCGG | 1 cut(s) | 110 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 76 |
| BsnI | GGCC | 3 cut(s) | 69, 221, 230 |
| Bsp143I | GATC | 2 cut(s) | 148, 307 |
| BspANI | GGCC | 3 cut(s) | 69, 221, 230 |
| BspFNI | CGCG | 1 cut(s) | 248 |
| BspPI | GGATC | 1 cut(s) | 315 |
| BsrDI | GCAATG | 1 cut(s) | 164 |
| BsrI | ACTGG | 2 cut(s) | 28, 211 |
| BssECI | CCNNGG | 1 cut(s) | 401 |
| BssMI | GATC | 2 cut(s) | 148, 307 |
| Bst2UI | CCWGG | 1 cut(s) | 402 |
| BstC8I | GCNNGC | 1 cut(s) | 355 |
| BstDEI | CTNAG | 1 cut(s) | 131 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 74 |
| BstF5I | GGATG | 1 cut(s) | 316 |
| BstFNI | CGCG | 1 cut(s) | 248 |
| BstKTI | GATC | 2 cut(s) | 151, 310 |
| BstMBI | GATC | 2 cut(s) | 148, 307 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 227, 354 |
| BstNI | CCWGG | 1 cut(s) | 402 |
| BstSCI | CCNGG | 1 cut(s) | 400 |
| BstUI | CGCG | 1 cut(s) | 248 |
| BsuRI | GGCC | 3 cut(s) | 69, 221, 230 |
| BtsCI | GGATG | 1 cut(s) | 316 |
| BtsIMutI | CAGTG | 1 cut(s) | 204 |
| Cac8I | GCNNGC | 1 cut(s) | 355 |
| Cfr13I | GGNCC | 2 cut(s) | 220, 229 |
| CviJI | RGCY | 5 cut(s) | 17, 69, 221, 230, 398 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 69, 221, 230, 398 |
| DdeI | CTNAG | 1 cut(s) | 131 |
| DpnI | GATC | 2 cut(s) | 150, 309 |
| DpnII | GATC | 2 cut(s) | 148, 307 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 74 |
| EcoRI | GAATTC | 1 cut(s) | 102 |
| EcoRII | CCWGG | 1 cut(s) | 400 |
| FaiI | YATR | 4 cut(s) | 47, 312, 386, 420 |
| FbaI | TGATCA | 1 cut(s) | 148 |
| FokI | GGATG | 1 cut(s) | 303 |
| FspBI | CTAG | 1 cut(s) | 170 |
| GsuI | CTGGAG | 1 cut(s) | 384 |
| HaeIII | GGCC | 3 cut(s) | 69, 221, 230 |
| HapII | CCGG | 1 cut(s) | 110 |
| HpaII | CCGG | 1 cut(s) | 110 |
| HphI | GGTGA | 2 cut(s) | 22, 271 |
| Hpy188I | TCNGA | 2 cut(s) | 148, 153 |
| Hpy188III | TCNNGA | 2 cut(s) | 191, 276 |
| HpyAV | CCTTC | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 3 cut(s) | 115, 181, 243 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 227, 354 |
| HpyF3I | CTNAG | 1 cut(s) | 131 |
| Ksp22I | TGATCA | 1 cut(s) | 148 |
| Kzo9I | GATC | 2 cut(s) | 148, 307 |
| LmnI | GCTCC | 1 cut(s) | 403 |
| LpnPI | CCDG | 7 cut(s) | 9, 123, 192, 261, 339, 387, 414 |
| MaeI | CTAG | 1 cut(s) | 170 |
| MaeIII | GTNAC | 2 cut(s) | 289, 328 |
| MalI | GATC | 2 cut(s) | 150, 309 |
| MboI | GATC | 2 cut(s) | 148, 307 |
| MboII | GAAGA | 2 cut(s) | 274, 382 |
| MfeI | CAATTG | 1 cut(s) | 215 |
| MluCI | AATT | 4 cut(s) | 33, 102, 215, 392 |
| MnlI | CCTC | 6 cut(s) | 82, 91, 117, 147, 330, 370 |
| MseI | TTAA | 1 cut(s) | 6 |
| MspI | CCGG | 1 cut(s) | 110 |
| MspR9I | CCNGG | 1 cut(s) | 402 |
| MunI | CAATTG | 1 cut(s) | 215 |
| MvaI | CCWGG | 1 cut(s) | 402 |
| MvnI | CGCG | 1 cut(s) | 248 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 227, 354 |
| NdeII | GATC | 2 cut(s) | 148, 307 |
| Psp6I | CCWGG | 1 cut(s) | 400 |
| PspGI | CCWGG | 1 cut(s) | 400 |
| PspPI | GGNCC | 2 cut(s) | 220, 229 |
| SaqAI | TTAA | 1 cut(s) | 6 |
| Sau3AI | GATC | 2 cut(s) | 148, 307 |
| Sau96I | GGNCC | 2 cut(s) | 220, 229 |
| ScrFI | CCNGG | 1 cut(s) | 402 |
| SetI | ASST | 3 cut(s) | 12, 125, 400 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 227 |
| SmlI | CTYRAG | 1 cut(s) | 189 |
| SmoI | CTYRAG | 1 cut(s) | 189 |
| Sse9I | AATT | 4 cut(s) | 33, 102, 215, 392 |
| SspMI | CTAG | 1 cut(s) | 170 |
| StyD4I | CCNGG | 1 cut(s) | 400 |
| TasI | AATT | 4 cut(s) | 33, 102, 215, 392 |
| Tru1I | TTAA | 1 cut(s) | 6 |
| Tru9I | TTAA | 1 cut(s) | 6 |
| TscAI | CASTG | 1 cut(s) | 211 |
| TspRI | CASTG | 1 cut(s) | 211 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 74 |
| XapI | RAATTY | 1 cut(s) | 102 |
| XspI | CTAG | 1 cut(s) | 170 |