isoform X1
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000288.1_g000022 |
| rosa_samantha | Rh3CG235500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 30 |
| AclWI | GGATC | 1 cut(s) | 196 |
| AcoI | YGGCCR | 2 cut(s) | 57, 417 |
| AcsI | RAATTY | 1 cut(s) | 505 |
| AcuI | CTGAAG | 1 cut(s) | 521 |
| AflIII | ACRYGT | 1 cut(s) | 276 |
| AgsI | TTSAA | 3 cut(s) | 290, 311, 323 |
| AjnI | CCWGG | 1 cut(s) | 181 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 398, 430, 437, 469 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 228, 260 |
| AluBI | AGCT | 3 cut(s) | 170, 433, 500 |
| AluI | AGCT | 3 cut(s) | 170, 433, 500 |
| AlwI | GGATC | 1 cut(s) | 196 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 350 |
| AoxI | GGCC | 2 cut(s) | 57, 417 |
| ApeKI | GCWGC | 2 cut(s) | 170, 518 |
| ApoI | RAATTY | 1 cut(s) | 505 |
| AspS9I | GGNCC | 1 cut(s) | 361 |
| AvaII | GGWCC | 1 cut(s) | 361 |
| AxyI | CCTNAGG | 1 cut(s) | 268 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 319, 352 |
| BalI | TGGCCA | 2 cut(s) | 59, 419 |
| BanII | GRGCYC | 1 cut(s) | 40 |
| BbsI | GAAGAC | 1 cut(s) | 231 |
| BbvI | GCAGC | 2 cut(s) | 157, 505 |
| BccI | CCATC | 1 cut(s) | 443 |
| BciT130I | CCWGG | 1 cut(s) | 183 |
| BfaI | CTAG | 4 cut(s) | 12, 41, 153, 296 |
| BisI | GCNGC | 2 cut(s) | 171, 519 |
| BlsI | GCNGC | 2 cut(s) | 172, 520 |
| Bme1390I | CCNGG | 1 cut(s) | 183 |
| Bme18I | GGWCC | 1 cut(s) | 361 |
| BmgT120I | GGNCC | 1 cut(s) | 361 |
| BmiI | GGNNCC | 2 cut(s) | 37, 362 |
| BmrFI | CCNGG | 1 cut(s) | 183 |
| BmrI | ACTGGG | 1 cut(s) | 367 |
| BmuI | ACTGGG | 1 cut(s) | 367 |
| BpiI | GAAGAC | 1 cut(s) | 231 |
| BpmI | CTGGAG | 1 cut(s) | 54 |
| BsaJI | CCNNGG | 2 cut(s) | 136, 182 |
| Bse1I | ACTGG | 1 cut(s) | 362 |
| Bse21I | CCTNAGG | 1 cut(s) | 268 |
| BseBI | CCWGG | 1 cut(s) | 183 |
| BseDI | CCNNGG | 2 cut(s) | 136, 182 |
| BseMII | CTCAG | 2 cut(s) | 267, 359 |
| BseNI | ACTGG | 1 cut(s) | 362 |
| BseRI | GAGGAG | 1 cut(s) | 190 |
| BseXI | GCAGC | 2 cut(s) | 157, 505 |
| BshFI | GGCC | 2 cut(s) | 59, 419 |
| BsnI | GGCC | 2 cut(s) | 59, 419 |
| Bsp1286I | GDGCHC | 1 cut(s) | 40 |
| Bsp143I | GATC | 3 cut(s) | 130, 188, 463 |
| BspACI | CCGC | 1 cut(s) | 30 |
| BspANI | GGCC | 2 cut(s) | 59, 419 |
| BspCNI | CTCAG | 2 cut(s) | 266, 360 |
| BspLI | GGNNCC | 2 cut(s) | 37, 362 |
| BspPI | GGATC | 1 cut(s) | 196 |
| BsrI | ACTGG | 1 cut(s) | 362 |
| BssECI | CCNNGG | 2 cut(s) | 136, 182 |
| BssMI | GATC | 3 cut(s) | 130, 188, 463 |
| Bst2UI | CCWGG | 1 cut(s) | 183 |
| Bst4CI | ACNGT | 3 cut(s) | 77, 335, 585 |
| Bst6I | CTCTTC | 1 cut(s) | 39 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 350 |
| BstDEI | CTNAG | 3 cut(s) | 253, 268, 368 |
| BstKTI | GATC | 3 cut(s) | 133, 191, 466 |
| BstMBI | GATC | 3 cut(s) | 130, 188, 463 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 350, 497, 527 |
| BstNI | CCWGG | 1 cut(s) | 183 |
| BstNSI | RCATGY | 1 cut(s) | 280 |
| BstSCI | CCNGG | 1 cut(s) | 181 |
| BstV1I | GCAGC | 2 cut(s) | 157, 505 |
| BstV2I | GAAGAC | 1 cut(s) | 231 |
| Bsu36I | CCTNAGG | 1 cut(s) | 268 |
| BsuRI | GGCC | 2 cut(s) | 59, 419 |
| BtsIMutI | CAGTG | 1 cut(s) | 456 |
| CaiI | CAGNNNCTG | 1 cut(s) | 350 |
| Cfr13I | GGNCC | 1 cut(s) | 361 |
| CviAII | CATG | 1 cut(s) | 277 |
| DdeI | CTNAG | 3 cut(s) | 253, 268, 368 |
| DpnI | GATC | 3 cut(s) | 132, 190, 465 |
| DpnII | GATC | 3 cut(s) | 130, 188, 463 |
| EaeI | YGGCCR | 2 cut(s) | 57, 417 |
| Eam1104I | CTCTTC | 1 cut(s) | 39 |
| EarI | CTCTTC | 1 cut(s) | 39 |
| Eco24I | GRGCYC | 1 cut(s) | 40 |
| Eco47I | GGWCC | 1 cut(s) | 361 |
| Eco57I | CTGAAG | 1 cut(s) | 521 |
| Eco81I | CCTNAGG | 1 cut(s) | 268 |
| EcoO109I | RGGNCCY | 1 cut(s) | 361 |
| EcoRII | CCWGG | 1 cut(s) | 181 |
| EcoT38I | GRGCYC | 1 cut(s) | 40 |
| FaeI | CATG | 1 cut(s) | 280 |
| FaiI | YATR | 6 cut(s) | 86, 278, 342, 425, 488, 560 |
| FatI | CATG | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 2 cut(s) | 171, 519 |
| FriOI | GRGCYC | 1 cut(s) | 40 |
| Fsp4HI | GCNGC | 2 cut(s) | 171, 519 |
| FspBI | CTAG | 4 cut(s) | 12, 41, 153, 296 |
| GluI | GCNGC | 2 cut(s) | 171, 519 |
| GsuI | CTGGAG | 1 cut(s) | 54 |
| HaeIII | GGCC | 2 cut(s) | 59, 419 |
| Hin1II | CATG | 1 cut(s) | 280 |
| HincII | GTYRAC | 2 cut(s) | 196, 301 |
| HindII | GTYRAC | 2 cut(s) | 196, 301 |
| HinfI | GANTC | 3 cut(s) | 125, 197, 453 |
| HpaI | GTTAAC | 1 cut(s) | 301 |
| Hpy166II | GTNNAC | 2 cut(s) | 196, 301 |
| Hpy188I | TCNGA | 8 cut(s) | 130, 137, 256, 369, 468, 478, 540, 579 |
| Hpy188III | TCNNGA | 3 cut(s) | 144, 308, 378 |
| Hpy8I | GTNNAC | 2 cut(s) | 196, 301 |
| Hpy99I | CGWCG | 1 cut(s) | 71 |
| HpyAV | CCTTC | 3 cut(s) | 305, 374, 400 |
| HpyCH4III | ACNGT | 3 cut(s) | 77, 335, 585 |
| HpyCH4V | TGCA | 3 cut(s) | 344, 353, 568 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 350, 497, 527 |
| HpyF3I | CTNAG | 3 cut(s) | 253, 268, 368 |
| Hsp92II | CATG | 1 cut(s) | 280 |
| KspAI | GTTAAC | 1 cut(s) | 301 |
| Kzo9I | GATC | 3 cut(s) | 130, 188, 463 |
| LmnI | GCTCC | 1 cut(s) | 35 |
| LpnPI | CCDG | 8 cut(s) | 18, 129, 168, 189, 195, 343, 510, 568 |
| Lsp1109I | GCAGC | 2 cut(s) | 157, 505 |
| MaeI | CTAG | 4 cut(s) | 12, 41, 153, 296 |
| MalI | GATC | 3 cut(s) | 132, 190, 465 |
| MboI | GATC | 3 cut(s) | 130, 188, 463 |
| MboII | GAAGA | 2 cut(s) | 56, 236 |
| MfeI | CAATTG | 1 cut(s) | 525 |
| MhlI | GDGCHC | 1 cut(s) | 40 |
| MlsI | TGGCCA | 2 cut(s) | 59, 419 |
| MluCI | AATT | 2 cut(s) | 505, 525 |
| MluNI | TGGCCA | 2 cut(s) | 59, 419 |
| MlyI | GAGTC | 1 cut(s) | 191 |
| MnlI | CCTC | 6 cut(s) | 131, 156, 211, 262, 336, 604 |
| Mox20I | TGGCCA | 2 cut(s) | 59, 419 |
| MscI | TGGCCA | 2 cut(s) | 59, 419 |
| MseI | TTAA | 3 cut(s) | 300, 587, 607 |
| Msp20I | TGGCCA | 2 cut(s) | 59, 419 |
| MspA1I | CMGCKG | 2 cut(s) | 32, 500 |
| MspR9I | CCNGG | 1 cut(s) | 183 |
| MunI | CAATTG | 1 cut(s) | 525 |
| MvaI | CCWGG | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 350, 497, 527 |
| NdeII | GATC | 3 cut(s) | 130, 188, 463 |
| NlaIII | CATG | 1 cut(s) | 280 |
| NlaIV | GGNNCC | 2 cut(s) | 37, 362 |
| NspI | RCATGY | 1 cut(s) | 280 |
| PciI | ACATGT | 1 cut(s) | 276 |
| PfeI | GAWTC | 2 cut(s) | 125, 453 |
| PkrI | GCNGC | 2 cut(s) | 172, 520 |
| PleI | GAGTC | 1 cut(s) | 191 |
| PpsI | GAGTC | 1 cut(s) | 191 |
| PpuMI | RGGWCCY | 1 cut(s) | 361 |
| PscI | ACATGT | 1 cut(s) | 276 |
| Psp5II | RGGWCCY | 1 cut(s) | 361 |
| Psp6I | CCWGG | 1 cut(s) | 181 |
| PspGI | CCWGG | 1 cut(s) | 181 |
| PspN4I | GGNNCC | 2 cut(s) | 37, 362 |
| PspPI | GGNCC | 1 cut(s) | 361 |
| PspPPI | RGGWCCY | 1 cut(s) | 361 |
| PstNI | CAGNNNCTG | 1 cut(s) | 350 |
| PvuII | CAGCTG | 1 cut(s) | 500 |
| SaqAI | TTAA | 3 cut(s) | 300, 587, 607 |
| SatI | GCNGC | 2 cut(s) | 171, 519 |
| Sau3AI | GATC | 3 cut(s) | 130, 188, 463 |
| Sau96I | GGNCC | 1 cut(s) | 361 |
| SchI | GAGTC | 1 cut(s) | 191 |
| ScrFI | CCNGG | 1 cut(s) | 183 |
| SduI | GDGCHC | 1 cut(s) | 40 |
| SetI | ASST | 6 cut(s) | 172, 297, 328, 435, 502, 557 |
| SinI | GGWCC | 1 cut(s) | 361 |
| Sse9I | AATT | 2 cut(s) | 505, 525 |
| SsiI | CCGC | 1 cut(s) | 30 |
| SspMI | CTAG | 4 cut(s) | 12, 41, 153, 296 |
| StyD4I | CCNGG | 1 cut(s) | 181 |
| TaaI | ACNGT | 3 cut(s) | 77, 335, 585 |
| TaqI | TCGA | 1 cut(s) | 100 |
| TasI | AATT | 2 cut(s) | 505, 525 |
| TfiI | GAWTC | 2 cut(s) | 125, 453 |
| Tru1I | TTAA | 3 cut(s) | 300, 587, 607 |
| Tru9I | TTAA | 3 cut(s) | 300, 587, 607 |
| TscAI | CASTG | 1 cut(s) | 463 |
| TseI | GCWGC | 2 cut(s) | 170, 518 |
| TspDTI | ATGAA | 1 cut(s) | 419 |
| TspRI | CASTG | 1 cut(s) | 463 |
| VpaK11BI | GGWCC | 1 cut(s) | 361 |
| XapI | RAATTY | 1 cut(s) | 505 |
| XceI | RCATGY | 1 cut(s) | 280 |
| XspI | CTAG | 4 cut(s) | 12, 41, 153, 296 |