Rh3DG145700

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
12453989 .. 12454348
360 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG145700.1

Sequence Viewer

Length: 360 bp
ATGATTTTGGTTGCTTGGGTGTTTTCTTGTTGGAATAGAGGTAACATCCTAGAGGCAAGAGATCAAAGCCTTGGTACGGATTTTGTGGCCGAGGAAGTGGAGTTGGTGTTGAAGCTAGGGCTTTTGTGCTATAATTTGGAGCCAGTGGCAAGGCCAAGCATGCGACAAGTTGTTCAGTACTTGGCCGGTGATGTTGCTTTGCCGGAAGTGTCACTTCCCGGGTTTTCTTCTAATGGATTAACGATTGGACACCGTGAAGGTTTTGATGACTATGCTAAGTCGTATCAGTCTTCTTTAGGCAATAAGTTCTCCCATTCATCATATGTTCCAGAGTCGGCACTACTTTCAGGTGGTCGTTGA

Protein Analysis

119

Amino Acids

13.04

Weight (kDa)

5.02

Isoelectric Point (pI)

52.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0034121)

Species Orthologous Gene IDs
rosa_samantha Rh3BG144400 Rh3DG145700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 2 cut(s) 87, 183
AfaI GTAC 2 cut(s) 76, 179
AfiI CCNNNNNNNGG 1 cut(s) 76
AgsI TTSAA 1 cut(s) 112
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
Ama87I CYCGRG 1 cut(s) 218
AoxI GGCC 3 cut(s) 87, 152, 183
AsuC2I CCSGG 2 cut(s) 219, 220
AsuHPI GGTGA 1 cut(s) 200
AvaI CYCGRG 1 cut(s) 218
BbsI GAAGAC 1 cut(s) 282
BcnI CCSGG 2 cut(s) 219, 220
BfaI CTAG 2 cut(s) 50, 116
BmcAI AGTACT 1 cut(s) 179
Bme1390I CCNGG 2 cut(s) 219, 220
BmeT110I CYCGRG 1 cut(s) 218
BmiI GGNNCC 1 cut(s) 141
BmrFI CCNGG 2 cut(s) 219, 220
BpiI GAAGAC 1 cut(s) 282
BpuMI CCSGG 2 cut(s) 219, 220
BsaJI CCNNGG 3 cut(s) 70, 90, 218
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bsc4I CCNNNNNNNGG 1 cut(s) 76
Bse118I RCCGGY 1 cut(s) 185
Bse1I ACTGG 1 cut(s) 143
BseDI CCNNGG 3 cut(s) 70, 90, 218
BseGI GGATG 1 cut(s) 45
BseLI CCNNNNNNNGG 1 cut(s) 76
BseNI ACTGG 1 cut(s) 143
BshFI GGCC 3 cut(s) 89, 154, 185
BsiHKCI CYCGRG 1 cut(s) 218
BsiSI CCGG 3 cut(s) 186, 203, 219
BslI CCNNNNNNNGG 1 cut(s) 76
BsnI GGCC 3 cut(s) 89, 154, 185
BsoBI CYCGRG 1 cut(s) 218
Bsp143I GATC 1 cut(s) 61
BspANI GGCC 3 cut(s) 89, 154, 185
BspLI GGNNCC 1 cut(s) 141
BsrFI RCCGGY 1 cut(s) 185
BsrI ACTGG 1 cut(s) 143
BssAI RCCGGY 1 cut(s) 185
BssECI CCNNGG 3 cut(s) 70, 90, 218
BssMI GATC 1 cut(s) 61
BssT1I CCWWGG 1 cut(s) 70
Bst4CI ACNGT 1 cut(s) 254
BstC8I GCNNGC 1 cut(s) 161
BstDEI CTNAG 1 cut(s) 276
BstF5I GGATG 1 cut(s) 45
BstKTI GATC 1 cut(s) 64
BstMBI GATC 1 cut(s) 61
BstMWI GCNNNNNNNGC 1 cut(s) 160
BstNSI RCATGY 1 cut(s) 163
BstSCI CCNGG 2 cut(s) 217, 218
BstV2I GAAGAC 1 cut(s) 282
BsuRI GGCC 3 cut(s) 89, 154, 185
BtsCI GGATG 1 cut(s) 45
BtsIMutI CAGTG 1 cut(s) 150
Cac8I GCNNGC 1 cut(s) 161
Cfr10I RCCGGY 1 cut(s) 185
Cfr9I CCCGGG 1 cut(s) 218
Csp6I GTAC 2 cut(s) 75, 178
CviAII CATG 1 cut(s) 160
CviJI RGCY 7 cut(s) 69, 89, 115, 121, 142, 154, 185
CviKI_1 RGCY 7 cut(s) 69, 89, 115, 121, 142, 154, 185
CviQI GTAC 2 cut(s) 75, 178
DdeI CTNAG 1 cut(s) 276
DpnI GATC 1 cut(s) 63
DpnII GATC 1 cut(s) 61
EaeI YGGCCR 2 cut(s) 87, 183
Eco130I CCWWGG 1 cut(s) 70
Eco88I CYCGRG 1 cut(s) 218
EcoT14I CCWWGG 1 cut(s) 70
ErhI CCWWGG 1 cut(s) 70
FaeI CATG 1 cut(s) 163
FaiI YATR 5 cut(s) 132, 161, 273, 322, 324
FalI AAGNNNNNCTT 2 cut(s) 198, 230
FatI CATG 1 cut(s) 159
FauNDI CATATG 1 cut(s) 322
FokI GGATG 1 cut(s) 32
FspBI CTAG 2 cut(s) 50, 116
HaeIII GGCC 3 cut(s) 89, 154, 185
HapII CCGG 3 cut(s) 186, 203, 219
Hin1II CATG 1 cut(s) 163
HinfI GANTC 1 cut(s) 332
HpaII CCGG 3 cut(s) 186, 203, 219
HphI GGTGA 1 cut(s) 200
Hpy188III TCNNGA 1 cut(s) 329
HpyAV CCTTC 1 cut(s) 251
HpyCH4III ACNGT 1 cut(s) 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 160
HpyF3I CTNAG 1 cut(s) 276
Hsp92II CATG 1 cut(s) 163
Kzo9I GATC 1 cut(s) 61
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 6 cut(s) 156, 199, 216, 232, 333, 342
MaeI CTAG 2 cut(s) 50, 116
MaeIII GTNAC 2 cut(s) 41, 210
MalI GATC 1 cut(s) 63
MboI GATC 1 cut(s) 61
MboII GAAGA 2 cut(s) 219, 282
MluCI AATT 1 cut(s) 133
MlyI GAGTC 1 cut(s) 341
MmeI TCCRAC 1 cut(s) 11
MnlI CCTC 3 cut(s) 32, 46, 85
MseI TTAA 1 cut(s) 239
MspI CCGG 3 cut(s) 186, 203, 219
MspR9I CCNGG 2 cut(s) 219, 220
MwoI GCNNNNNNNGC 1 cut(s) 160
NciI CCSGG 2 cut(s) 219, 220
NdeI CATATG 1 cut(s) 322
NdeII GATC 1 cut(s) 61
NlaIII CATG 1 cut(s) 163
NlaIV GGNNCC 1 cut(s) 141
NmeAIII GCCGAG 1 cut(s) 115
NmuCI GTSAC 1 cut(s) 210
NspI RCATGY 1 cut(s) 163
PaeI GCATGC 1 cut(s) 163
PleI GAGTC 1 cut(s) 340
PpsI GAGTC 1 cut(s) 340
PspN4I GGNNCC 1 cut(s) 141
RsaI GTAC 2 cut(s) 76, 179
RsaNI GTAC 2 cut(s) 75, 178
SaqAI TTAA 1 cut(s) 239
Sau3AI GATC 1 cut(s) 61
ScaI AGTACT 1 cut(s) 179
SchI GAGTC 1 cut(s) 341
ScrFI CCNGG 2 cut(s) 219, 220
SetI ASST 4 cut(s) 43, 117, 262, 352
SmaI CCCGGG 1 cut(s) 220
SphI GCATGC 1 cut(s) 163
Sse9I AATT 1 cut(s) 133
SspMI CTAG 2 cut(s) 50, 116
StyD4I CCNGG 2 cut(s) 217, 218
StyI CCWWGG 1 cut(s) 70
TaaI ACNGT 1 cut(s) 254
TasI AATT 1 cut(s) 133
TatI WGTACW 1 cut(s) 177
Tru1I TTAA 1 cut(s) 239
Tru9I TTAA 1 cut(s) 239
TscAI CASTG 1 cut(s) 150
TseFI GTSAC 1 cut(s) 210
Tsp45I GTSAC 1 cut(s) 210
TspDTI ATGAA 1 cut(s) 306
TspGWI ACGGA 1 cut(s) 92
TspMI CCCGGG 1 cut(s) 218
TspRI CASTG 1 cut(s) 150
XceI RCATGY 1 cut(s) 163
XmaI CCCGGG 1 cut(s) 218
XspI CTAG 2 cut(s) 50, 116
ZrmI AGTACT 1 cut(s) 179
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.