Rh3DG227700

glutathione s-transferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Forward (+)
21490894 .. 21491118
225 bp
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UTR
Exon/CDS
Intron
Rh3DG227700.1

Sequence Viewer

Length: 225 bp
ATGGGTGAGAGATTTGGGTTCCTGGACATTGCTCTCATCACATTCTACAGCTGGTTTCATGCTTGCGAGACACTTGGAAACTTCAATATAGAGGCCGAGTGCCCCAAGCTGATTTCATGGGCCAAGAGATGCTTGCAGAAGGAGAGTGTTTCGAAGTCTCTTGCTGACCCGACAAAGGTTTATGAGAATCTTCTTGAGATGAAGAAGAGGCTTGGTGTGGAGTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

74

Amino Acids

8.55

Weight (kDa)

6.57

Isoelectric Point (pI)

49.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029998)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr3g0475891
rosa_samantha Rh3DG227700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 175
AgsI TTSAA 1 cut(s) 85
AjnI CCWGG 1 cut(s) 21
AluBI AGCT 2 cut(s) 51, 109
AluI AGCT 2 cut(s) 51, 109
Alw26I GTCTC 2 cut(s) 62, 162
AoxI GGCC 2 cut(s) 93, 120
AspS9I GGNCC 1 cut(s) 120
AsuHPI GGTGA 1 cut(s) 17
AsuII TTCGAA 1 cut(s) 152
BaeGI GKGCMC 1 cut(s) 104
BciT130I CCWGG 1 cut(s) 23
BcoDI GTCTC 2 cut(s) 62, 162
BfmI CTRYAG 1 cut(s) 46
Bme1390I CCNGG 1 cut(s) 23
BmgT120I GGNCC 1 cut(s) 120
BmiI GGNNCC 1 cut(s) 20
BmrFI CCNGG 1 cut(s) 23
BmsI GCATC 1 cut(s) 119
Bpu14I TTCGAA 1 cut(s) 152
BpuEI CTTGAG 1 cut(s) 215
Bsc4I CCNNNNNNNGG 1 cut(s) 175
Bse3DI GCAATG 1 cut(s) 27
BseBI CCWGG 1 cut(s) 23
BseLI CCNNNNNNNGG 1 cut(s) 175
BseMI GCAATG 1 cut(s) 27
BseSI GKGCMC 1 cut(s) 104
BshFI GGCC 2 cut(s) 95, 122
BslI CCNNNNNNNGG 1 cut(s) 175
BsmAI GTCTC 2 cut(s) 62, 162
BsnI GGCC 2 cut(s) 95, 122
Bsp119I TTCGAA 1 cut(s) 152
Bsp1286I GDGCHC 1 cut(s) 104
BspANI GGCC 2 cut(s) 95, 122
BspLI GGNNCC 1 cut(s) 20
BspT104I TTCGAA 1 cut(s) 152
BsrDI GCAATG 1 cut(s) 27
Bst2UI CCWGG 1 cut(s) 23
Bst6I CTCTTC 1 cut(s) 200
BstBI TTCGAA 1 cut(s) 152
BstC8I GCNNGC 2 cut(s) 64, 134
BstMAI GTCTC 2 cut(s) 62, 162
BstNI CCWGG 1 cut(s) 23
BstSCI CCNGG 1 cut(s) 21
BstSFI CTRYAG 1 cut(s) 46
BstSLI GKGCMC 1 cut(s) 104
BsuRI GGCC 2 cut(s) 95, 122
Cac8I GCNNGC 2 cut(s) 64, 134
Cfr13I GGNCC 1 cut(s) 120
CviAII CATG 2 cut(s) 59, 117
CviJI RGCY 5 cut(s) 51, 95, 109, 122, 211
CviKI_1 RGCY 5 cut(s) 51, 95, 109, 122, 211
Eam1104I CTCTTC 1 cut(s) 200
EarI CTCTTC 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 21
FaeI CATG 2 cut(s) 62, 120
FaiI YATR 4 cut(s) 60, 89, 118, 183
FalI AAGNNNNNCTT 2 cut(s) 116, 148
FatI CATG 2 cut(s) 58, 116
HaeIII GGCC 2 cut(s) 95, 122
Hin1II CATG 2 cut(s) 62, 120
HinfI GANTC 1 cut(s) 187
HphI GGTGA 1 cut(s) 17
Hpy188III TCNNGA 1 cut(s) 194
HpyAV CCTTC 1 cut(s) 133
HpyCH4V TGCA 1 cut(s) 136
Hsp92II CATG 2 cut(s) 62, 120
LpnPI CCDG 3 cut(s) 8, 35, 37
LweI GCATC 1 cut(s) 119
MboII GAAGA 3 cut(s) 182, 214, 217
MhlI GDGCHC 1 cut(s) 104
MnlI CCTC 2 cut(s) 85, 201
MspA1I CMGCKG 1 cut(s) 51
MspR9I CCNGG 1 cut(s) 23
MvaI CCWGG 1 cut(s) 23
NlaIII CATG 2 cut(s) 62, 120
NlaIV GGNNCC 1 cut(s) 20
NmeAIII GCCGAG 1 cut(s) 121
NspV TTCGAA 1 cut(s) 152
PfeI GAWTC 1 cut(s) 187
PfoI TCCNGGA 1 cut(s) 21
Psp6I CCWGG 1 cut(s) 21
PspGI CCWGG 1 cut(s) 21
PspN4I GGNNCC 1 cut(s) 20
PspPI GGNCC 1 cut(s) 120
PvuII CAGCTG 1 cut(s) 51
Sau96I GGNCC 1 cut(s) 120
ScrFI CCNGG 1 cut(s) 23
SduI GDGCHC 1 cut(s) 104
SetI ASST 3 cut(s) 53, 111, 180
SfaNI GCATC 1 cut(s) 119
SfcI CTRYAG 1 cut(s) 46
SfuI TTCGAA 1 cut(s) 152
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
StyD4I CCNGG 1 cut(s) 21
TaqI TCGA 1 cut(s) 152
TfiI GAWTC 1 cut(s) 187
TspDTI ATGAA 3 cut(s) 47, 105, 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.