Rh4AG310800

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
OG0018838
Physical Location & Seq
Forward (+)
62185098 .. 62191239
6142 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG310800.1

Sequence Viewer

Length: 1986 bp
ATGGGTCTTATGAAACAGGGGAAGTCAGTCCCATTACAAAACCCAAATGGAAACTTGGTACAGTATCAAACCCGCAGAGACTTTCCCATAGACAACAAAAAGTACTGCTACACCTTAAGCACACAAGAGAGGAGAAGGTATCTAGTTCGTGCAACGTTTCAATATGGCAGCCTGAAAAGCGAGGAGACATACCCAAAATTTGAGCTCTATTTGGATGCAACTATGTGGTCTACTGTTACTATTTTCGAGGCCTCGAGAACATATGTGAATGAAATGATCATTAGGGCGTCGTCGAATTCGGTTGATGTTTGCATGTGTTGTGCTACAACTGGTTTCCCATTCATTTCCACTTTGGAGTTGCGGCCTTTGAACATTTCTATGTATGCCACTGATTTTGAGGATGATTTCTTCTTGAAAGTGGCTGCTAGGGTGAATTTCGGTGCTCCGACCACGGATGCCATAAGGTACCCTGATGATCCCTATGACCGGATTTGGGATTCTGATCTTGTGAAAAGGCAAAACTATCTGGTAGGGGTGGCTCCTGGTACAGAAAGAATCAATACATCTAGGAATGTGAATACAGGGAGCAGAGAATACCCACCTATGAAGGTGATGCAGACTGCGGTGGTTGGCACAAAAGGAACACTGAGCTACAGATTGAATCTAGATGGTTTCCCAGCAAATGCTAGAGCTTATGCTTACTTTGCGGAAATAGAGGATTTGGGTGCCAATGAGAGTAGGAAATTCAGATTGGAGCAACCTATCTTGCCGGAGTATAACAGTGCAGTGGTGAATATTGCTGAGAATGCAAATGGGATGTACACTCTTTATGAACCAAGCTACATGAATGTGAGTATGGAGTTTGTTCTGTCATTTGCCTTTGTTAAGACCCCGGATTCTACTCGAGGACCACTTCTAAATGCAATTGAAATAAGTAAATATGTGCCGATTGCTGCAAAGACGGATAGGCAAGATTTGGCTGTTCTCAATATCCTTCGTCTCATGTCCTCCGAAAGTCTGTCACTAGATGAAGGTGATCCGTGTGTCCCGACTCCCTGGGAATGGGTGAATTGTAGTTCTACATCACCATCGAGAATTACAAAAATTGATTTATCAGGGAAAAATATGAAGGGTGAGATTCCATTGGAGCTTAATAACATGCAGGAGTTGACAGAGTTGTGGTTGGATGGTAACTCCTTCAGTGGACCGTTTCCTGACATCAGTAATCTTATCAATATAAGGATTCTGCATCTAGAGAATAACAAGTTGACTGGTGCACTACCTTCTTACCTGGATAGCTTGTCAAATTTGCAAGAACTGTACATACAGAACAATTCTTTCAGTGGGGAAATTCCTGCAGGACTGTTAACAGGGAAAGTCACTTTTGAATATAAAGATAATCCCGGGTTACACAAGGGAGCACAAAAGCAGAAGCATTTTAAGTTGATAATTGGAATTTCAGTTGGAGTACTAGTGCTTGTAACCATTTTAATCTTGGGGGGTCTATTGCTATTGCGTAGTCTTCGAGAGAAGTCACGTCATCAGAAAAGTTATCAGAAAGGTGATTCTTTGCGCGCCAGCACCAAGCCTTCAACAGCCTATTCAGTTTCCCGGGGGCATTTGAGGGATGAAGGCATAGCTTGCTACATTACGCTCCCTGATCTGGAAGAAGCCACTAACAGTTTTTCAAAGAAAATTGGGAAAGGAAGCTTTGGAACTGTCTATTATGGGAGGATGAAAGACGGAAAAGAGGTGGCAGTTAAAATGATGGCGGATTCCTCTACCCACATGAATAAGCAATTTGTGACTGAGATAGCTCTCTTGTCAAGGATTCATCATAGGAACTTGGTTCCTTTAATTGGATACTGTGAAGAAGAACATCAATGCATTCTGGTTTATGAGTATATGCACAATGGGACATTACGGGATCACTTACATGGTCTGCTCTCTCATCTAATACAAGTTAAAATCTGTTCTTTGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_4 LRR_8 Malectin_like Pkinase_Tyr

Protein Analysis

661

Amino Acids

74.39

Weight (kDa)

7.18

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 5 - 313 3.2e-74 Malectin-like domain
PK_Tyr_Ser-Thr PF07714 562 - 647 9.9e-20 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 563 - 646 1.1e-16 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0018838)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g24900 FvH4_4g24900 FvH4_4g24900 FvH4_4g24900 FvH4_4g24900 FvH4_4g24900 FvH4_4g24900
rosa_rugosa Rorug04G0253800
rosa_samantha Rh4AG310800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 465
AccB1I GGYRCC 2 cut(s) 465, 725
AccI GTMKAC 1 cut(s) 230
AccII CGCG 1 cut(s) 1575
AciI CCGC 5 cut(s) 73, 361, 623, 707, 1772
AclI AACGTT 1 cut(s) 155
AclWI GGATC 3 cut(s) 470, 1031, 1935
AcsI RAATTY 7 cut(s) 197, 295, 433, 743, 1306, 1350, 1455
AcuI CTGAAG 1 cut(s) 1183
AcyI GRCGYC 1 cut(s) 287
AfaI GTAC 7 cut(s) 60, 104, 467, 547, 821, 1322, 1470
AfiI CCNNNNNNNGG 5 cut(s) 486, 493, 1062, 1663, 1859
AflII CTTAAG 1 cut(s) 115
AgsI TTSAA 8 cut(s) 161, 370, 415, 661, 929, 1388, 1593, 1689
AhlI ACTAGT 1 cut(s) 1471
AjiI CACGTC 1 cut(s) 1538
AjnI CCWGG 3 cut(s) 541, 1055, 1290
AjuI GAANNNNNNNTTGG 2 cut(s) 734, 766
AluBI AGCT 9 cut(s) 205, 651, 692, 840, 1150, 1299, 1640, 1710, 1817
AluI AGCT 9 cut(s) 205, 651, 692, 840, 1150, 1299, 1640, 1710, 1817
Alw21I GWGCWC 4 cut(s) 207, 445, 1279, 1423
Alw26I GTCTC 3 cut(s) 72, 179, 1004
Alw44I GTGCAC 1 cut(s) 1275
AlwI GGATC 3 cut(s) 470, 1031, 1935
Ama87I CYCGRG 4 cut(s) 253, 903, 1403, 1611
AoxI GGCC 2 cut(s) 249, 362
ApaLI GTGCAC 1 cut(s) 1275
ApeKI GCWGC 3 cut(s) 168, 422, 953
ApoI RAATTY 7 cut(s) 197, 295, 433, 743, 1306, 1350, 1455
Asp718I GGTACC 1 cut(s) 465
AspLEI GCGC 2 cut(s) 1575, 1577
AspS9I GGNCC 2 cut(s) 908, 1205
AsuC2I CCSGG 5 cut(s) 893, 1404, 1405, 1612, 1613
AsuHPI GGTGA 8 cut(s) 442, 622, 802, 1046, 1077, 1078, 1145, 1574
AvaI CYCGRG 4 cut(s) 253, 903, 1403, 1611
AvaII GGWCC 2 cut(s) 908, 1205
BaeGI GKGCMC 1 cut(s) 1279
BanI GGYRCC 2 cut(s) 465, 725
BanII GRGCYC 1 cut(s) 207
BbsI GAAGAC 1 cut(s) 1514
Bbv12I GWGCWC 4 cut(s) 207, 445, 1279, 1423
BbvI GCAGC 3 cut(s) 180, 409, 940
BccI CCATC 4 cut(s) 662, 1096, 1181, 1762
BciT130I CCWGG 3 cut(s) 543, 1057, 1292
BciVI GTATCC 1 cut(s) 1856
BclI TGATCA 1 cut(s) 276
BcnI CCSGG 5 cut(s) 893, 1404, 1405, 1612, 1613
BcoDI GTCTC 3 cut(s) 72, 179, 1004
BcuI ACTAGT 1 cut(s) 1471
BfaI CTAG 8 cut(s) 143, 426, 567, 665, 687, 1025, 1253, 1472
BfmI CTRYAG 2 cut(s) 652, 1356
BfrI CTTAAG 1 cut(s) 115
BfuI GTATCC 1 cut(s) 1856
BisI GCNGC 4 cut(s) 169, 362, 423, 954
BlsI GCNGC 4 cut(s) 170, 363, 424, 955
BmcAI AGTACT 2 cut(s) 104, 1470
Bme1390I CCNGG 8 cut(s) 543, 893, 1057, 1292, 1404, 1405, 1612, 1613
Bme18I GGWCC 2 cut(s) 908, 1205
BmeT110I CYCGRG 4 cut(s) 253, 903, 1403, 1611
BmgBI CACGTC 1 cut(s) 1538
BmgT120I GGNCC 2 cut(s) 908, 1205
BmiI GGNNCC 4 cut(s) 467, 540, 727, 1851
BmrFI CCNGG 8 cut(s) 543, 893, 1057, 1292, 1404, 1405, 1612, 1613
BmsI GCATC 4 cut(s) 205, 445, 603, 1258
BpiI GAAGAC 1 cut(s) 1514
BpuMI CCSGG 5 cut(s) 893, 1404, 1405, 1612, 1613
BsaBI GATNNNNATC 1 cut(s) 501
BsaHI GRCGYC 1 cut(s) 287
BsaJI CCNNGG 7 cut(s) 450, 891, 1055, 1056, 1403, 1611, 1612
BsaWI WCCGGW 1 cut(s) 486
BsaXI ACNNNNNCTCC 2 cut(s) 1458, 1488
Bsc4I CCNNNNNNNGG 5 cut(s) 486, 493, 1062, 1663, 1859
Bse1I ACTGG 2 cut(s) 334, 1276
Bse8I GATNNNNATC 1 cut(s) 501
BseBI CCWGG 3 cut(s) 543, 1057, 1292
BseDI CCNNGG 7 cut(s) 450, 891, 1055, 1056, 1403, 1611, 1612
BseGI GGATG 7 cut(s) 220, 406, 460, 822, 1192, 1633, 1740
BseJI GATNNNNATC 1 cut(s) 501
BseLI CCNNNNNNNGG 5 cut(s) 486, 493, 1062, 1663, 1859
BseMII CTCAG 3 cut(s) 638, 792, 1800
BseNI ACTGG 2 cut(s) 334, 1276
BsePI GCGCGC 1 cut(s) 1573
BseRI GAGGAG 2 cut(s) 145, 197
BseSI GKGCMC 1 cut(s) 1279
BseXI GCAGC 3 cut(s) 180, 409, 940
BseYI CCCAGC 1 cut(s) 676
BsgI GTGCAG 1 cut(s) 804
Bsh1236I CGCG 1 cut(s) 1575
BshFI GGCC 2 cut(s) 251, 364
BshNI GGYRCC 2 cut(s) 465, 725
BsiHKAI GWGCWC 4 cut(s) 207, 445, 1279, 1423
BsiHKCI CYCGRG 4 cut(s) 253, 903, 1403, 1611
BsiSI CCGG 5 cut(s) 487, 770, 893, 1404, 1612
BslFI GGGAC 3 cut(s) 14, 1031, 1930
BslI CCNNNNNNNGG 5 cut(s) 486, 493, 1062, 1663, 1859
BsmAI GTCTC 3 cut(s) 72, 179, 1004
BsmBI CGTCTC 1 cut(s) 1004
BsmFI GGGAC 3 cut(s) 14, 1031, 1930
BsmI GAATGC 2 cut(s) 811, 1887
BsnI GGCC 2 cut(s) 251, 364
BsoBI CYCGRG 4 cut(s) 253, 903, 1403, 1611
Bsp1286I GDGCHC 4 cut(s) 207, 445, 1279, 1423
Bsp1407I TGTACA 2 cut(s) 819, 1320
Bsp143I GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
BspACI CCGC 5 cut(s) 73, 361, 623, 707, 1772
BspANI GGCC 2 cut(s) 251, 364
BspCNI CTCAG 3 cut(s) 639, 793, 1801
BspFNI CGCG 1 cut(s) 1575
BspLI GGNNCC 4 cut(s) 467, 540, 727, 1851
BspMAI CTGCAG 1 cut(s) 1360
BspPI GGATC 3 cut(s) 470, 1031, 1935
BspT107I GGYRCC 2 cut(s) 465, 725
BspTI CTTAAG 1 cut(s) 115
BsrGI TGTACA 2 cut(s) 819, 1320
BsrI ACTGG 2 cut(s) 334, 1276
BssECI CCNNGG 7 cut(s) 450, 891, 1055, 1056, 1403, 1611, 1612
BssHII GCGCGC 1 cut(s) 1573
BssMI GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
BssNI GRCGYC 1 cut(s) 287
Bst2UI CCWGG 3 cut(s) 543, 1057, 1292
Bst4CI ACNGT 9 cut(s) 63, 235, 782, 1209, 1320, 1365, 1682, 1720, 1868
BstACI GRCGYC 1 cut(s) 287
BstAFI CTTAAG 1 cut(s) 115
BstAPI GCANNNNNTGC 1 cut(s) 1641
BstAUI TGTACA 2 cut(s) 819, 1320
BstC8I GCNNGC 3 cut(s) 1575, 1579, 1642
BstDEI CTNAG 3 cut(s) 647, 801, 1809
BstDSI CCRYGG 1 cut(s) 450
BstF5I GGATG 7 cut(s) 220, 406, 460, 822, 1192, 1633, 1740
BstFNI CGCG 1 cut(s) 1575
BstHHI GCGC 2 cut(s) 1575, 1577
BstKTI GATC 6 cut(s) 279, 478, 505, 1039, 1663, 1930
BstMAI GTCTC 3 cut(s) 72, 179, 1004
BstMBI GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
BstMWI GCNNNNNNNGC 4 cut(s) 177, 704, 806, 1641
BstNI CCWGG 3 cut(s) 543, 1057, 1292
BstNSI RCATGY 2 cut(s) 316, 1162
BstSCI CCNGG 8 cut(s) 541, 891, 1055, 1290, 1402, 1403, 1610, 1611
BstSFI CTRYAG 2 cut(s) 652, 1356
BstSLI GKGCMC 1 cut(s) 1279
BstUI CGCG 1 cut(s) 1575
BstV1I GCAGC 3 cut(s) 180, 409, 940
BstV2I GAAGAC 1 cut(s) 1514
BsuI GTATCC 1 cut(s) 1856
BsuRI GGCC 2 cut(s) 251, 364
BtgI CCRYGG 1 cut(s) 450
BtrI CACGTC 1 cut(s) 1538
BtsCI GGATG 7 cut(s) 220, 406, 460, 822, 1192, 1633, 1740
BtsI GCAGTG 1 cut(s) 792
BtsIMutI CAGTG 6 cut(s) 387, 644, 787, 792, 1207, 1348
Cac8I GCNNGC 3 cut(s) 1575, 1579, 1642
CfoI GCGC 2 cut(s) 1575, 1577
Cfr13I GGNCC 2 cut(s) 908, 1205
Cfr9I CCCGGG 2 cut(s) 1403, 1611
CseI GACGC 1 cut(s) 276
Csp6I GTAC 7 cut(s) 59, 103, 466, 546, 820, 1321, 1469
CspCI CAANNNNNGTGG 2 cut(s) 376, 411
CviAII CATG 6 cut(s) 313, 844, 1003, 1159, 1789, 1937
CviQI GTAC 7 cut(s) 59, 103, 466, 546, 820, 1321, 1469
DdeI CTNAG 3 cut(s) 647, 801, 1809
DpnI GATC 6 cut(s) 278, 477, 504, 1038, 1662, 1929
DpnII GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
EciI GGCGGA 1 cut(s) 1787
Ecl136II GAGCTC 1 cut(s) 205
Eco147I AGGCCT 1 cut(s) 251
Eco24I GRGCYC 1 cut(s) 207
Eco47I GGWCC 2 cut(s) 908, 1205
Eco53kI GAGCTC 1 cut(s) 205
Eco57I CTGAAG 1 cut(s) 1183
Eco88I CYCGRG 4 cut(s) 253, 903, 1403, 1611
EcoICRI GAGCTC 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 295
EcoRII CCWGG 3 cut(s) 541, 1055, 1290
EcoT22I ATGCAT 1 cut(s) 1889
EcoT38I GRGCYC 1 cut(s) 207
Esp3I CGTCTC 1 cut(s) 1004
FaeI CATG 6 cut(s) 316, 847, 1006, 1162, 1792, 1940
FaqI GGGAC 3 cut(s) 14, 1031, 1930
FatI CATG 6 cut(s) 312, 843, 1002, 1158, 1788, 1936
FauI CCCGC 1 cut(s) 80
FauNDI CATATG 1 cut(s) 262
FbaI TGATCA 1 cut(s) 276
FblI GTMKAC 1 cut(s) 230
Fnu4HI GCNGC 4 cut(s) 169, 362, 423, 954
FokI GGATG 7 cut(s) 227, 413, 467, 829, 1199, 1640, 1747
FriOI GRGCYC 1 cut(s) 207
Fsp4HI GCNGC 4 cut(s) 169, 362, 423, 954
FspBI CTAG 8 cut(s) 143, 426, 567, 665, 687, 1025, 1253, 1472
GlaI GCGC 2 cut(s) 1574, 1576
GluI GCNGC 4 cut(s) 169, 362, 423, 954
GsaI CCCAGC 1 cut(s) 680
HaeIII GGCC 2 cut(s) 251, 364
HapII CCGG 5 cut(s) 487, 770, 893, 1404, 1612
HgaI GACGC 1 cut(s) 276
HhaI GCGC 2 cut(s) 1575, 1577
Hin1I GRCGYC 1 cut(s) 287
Hin1II CATG 6 cut(s) 316, 847, 1006, 1162, 1792, 1940
Hin6I GCGC 2 cut(s) 1573, 1575
HinP1I GCGC 2 cut(s) 1573, 1575
HincII GTYRAC 3 cut(s) 1170, 1269, 1368
HindII GTYRAC 3 cut(s) 1170, 1269, 1368
HindIII AAGCTT 1 cut(s) 1708
HpaI GTTAAC 1 cut(s) 1368
HpaII CCGG 5 cut(s) 487, 770, 893, 1404, 1612
HphI GGTGA 8 cut(s) 442, 622, 802, 1046, 1077, 1078, 1145, 1574
Hpy166II GTNNAC 7 cut(s) 231, 822, 1170, 1205, 1269, 1277, 1368
Hpy188I TCNGA 6 cut(s) 447, 502, 749, 1012, 1545, 1557
Hpy188III TCNNGA 9 cut(s) 255, 412, 665, 1048, 1092, 1214, 1253, 1526, 1664
Hpy8I GTNNAC 7 cut(s) 231, 822, 1170, 1205, 1269, 1277, 1368
Hpy99I CGWCG 2 cut(s) 292, 295
HpyAV CCTTC 9 cut(s) 129, 601, 1004, 1025, 1123, 1207, 1293, 1599, 1625
HpyCH4III ACNGT 9 cut(s) 63, 235, 782, 1209, 1320, 1365, 1682, 1720, 1868
HpyCH4IV ACGT 2 cut(s) 155, 1537
HpyF10VI GCNNNNNNNGC 4 cut(s) 177, 704, 806, 1641
HpyF3I CTNAG 3 cut(s) 647, 801, 1809
HpySE526I ACGT 2 cut(s) 155, 1537
Hsp92I GRCGYC 1 cut(s) 287
Hsp92II CATG 6 cut(s) 316, 847, 1006, 1162, 1792, 1940
HspAI GCGC 2 cut(s) 1573, 1575
KpnI GGTACC 1 cut(s) 469
Ksp22I TGATCA 1 cut(s) 276
KspAI GTTAAC 1 cut(s) 1368
Kzo9I GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
LmnI GCTCC 7 cut(s) 448, 544, 585, 754, 1147, 1418, 1659
Lsp1109I GCAGC 3 cut(s) 180, 409, 940
LweI GCATC 4 cut(s) 205, 445, 603, 1258
MaeI CTAG 8 cut(s) 143, 426, 567, 665, 687, 1025, 1253, 1472
MaeII ACGT 2 cut(s) 155, 1537
MaeIII GTNAC 8 cut(s) 235, 1020, 1190, 1378, 1407, 1480, 1533, 1804
MalI GATC 6 cut(s) 278, 477, 504, 1038, 1662, 1929
MboI GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
MboII GAAGA 5 cut(s) 400, 1514, 1679, 1883, 1886
MfeI CAATTG 1 cut(s) 924
MhlI GDGCHC 4 cut(s) 207, 445, 1279, 1423
MlyI GAGTC 1 cut(s) 1045
MmeI TCCRAC 3 cut(s) 470, 1164, 1444
Mph1103I ATGCAT 1 cut(s) 1889
MslI CAYNNNNRTG 3 cut(s) 377, 848, 1935
MspCI CTTAAG 1 cut(s) 115
MspI CCGG 5 cut(s) 487, 770, 893, 1404, 1612
MspR9I CCNGG 8 cut(s) 543, 893, 1057, 1292, 1404, 1405, 1612, 1613
MunI CAATTG 1 cut(s) 924
Mva1269I GAATGC 2 cut(s) 811, 1887
MvaI CCWGG 3 cut(s) 543, 1057, 1292
MvnI CGCG 1 cut(s) 1575
MwoI GCNNNNNNNGC 4 cut(s) 177, 704, 806, 1641
NciI CCSGG 5 cut(s) 893, 1404, 1405, 1612, 1613
NdeI CATATG 1 cut(s) 262
NdeII GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
NlaIII CATG 6 cut(s) 316, 847, 1006, 1162, 1792, 1940
NlaIV GGNNCC 4 cut(s) 467, 540, 727, 1851
NmuCI GTSAC 4 cut(s) 1020, 1378, 1533, 1804
NsiI ATGCAT 1 cut(s) 1889
NspI RCATGY 2 cut(s) 316, 1162
PaeR7I CTCGAG 2 cut(s) 253, 903
PasI CCCWGGG 1 cut(s) 1056
PauI GCGCGC 1 cut(s) 1573
PceI AGGCCT 1 cut(s) 251
PctI GAATGC 2 cut(s) 811, 1887
PfeI GAWTC 9 cut(s) 497, 555, 661, 896, 1138, 1243, 1565, 1775, 1831
PkrI GCNGC 4 cut(s) 170, 363, 424, 955
PleI GAGTC 1 cut(s) 1045
PpsI GAGTC 1 cut(s) 1045
Psp124BI GAGCTC 1 cut(s) 207
Psp1406I AACGTT 1 cut(s) 155
Psp6I CCWGG 3 cut(s) 541, 1055, 1290
PspFI CCCAGC 1 cut(s) 676
PspGI CCWGG 3 cut(s) 541, 1055, 1290
PspN4I GGNNCC 4 cut(s) 467, 540, 727, 1851
PspPI GGNCC 2 cut(s) 908, 1205
PspXI VCTCGAGB 1 cut(s) 903
PsrI GAACNNNNNNTAC 2 cut(s) 1308, 1340
PstI CTGCAG 1 cut(s) 1360
PteI GCGCGC 1 cut(s) 1573
RsaI GTAC 7 cut(s) 60, 104, 467, 547, 821, 1322, 1470
RsaNI GTAC 7 cut(s) 59, 103, 466, 546, 820, 1321, 1469
RseI CAYNNNNRTG 3 cut(s) 377, 848, 1935
SacI GAGCTC 1 cut(s) 207
SatI GCNGC 4 cut(s) 169, 362, 423, 954
Sau3AI GATC 6 cut(s) 276, 475, 502, 1036, 1660, 1927
Sau96I GGNCC 2 cut(s) 908, 1205
SbfI CCTGCAGG 1 cut(s) 1360
ScaI AGTACT 2 cut(s) 104, 1470
SchI GAGTC 1 cut(s) 1045
ScrFI CCNGG 8 cut(s) 543, 893, 1057, 1292, 1404, 1405, 1612, 1613
SdaI CCTGCAGG 1 cut(s) 1360
SduI GDGCHC 4 cut(s) 207, 445, 1279, 1423
SfaNI GCATC 4 cut(s) 205, 445, 603, 1258
SfcI CTRYAG 2 cut(s) 652, 1356
Sfr274I CTCGAG 2 cut(s) 253, 903
SinI GGWCC 2 cut(s) 908, 1205
SlaI CTCGAG 2 cut(s) 253, 903
SmaI CCCGGG 2 cut(s) 1405, 1613
SmiMI CAYNNNNRTG 3 cut(s) 377, 848, 1935
SmlI CTYRAG 3 cut(s) 115, 253, 903
SmoI CTYRAG 3 cut(s) 115, 253, 903
SpeI ACTAGT 1 cut(s) 1471
Sse8387I CCTGCAGG 1 cut(s) 1360
SseBI AGGCCT 1 cut(s) 251
SsiI CCGC 5 cut(s) 73, 361, 623, 707, 1772
SspI AATATT 1 cut(s) 796
SspMI CTAG 8 cut(s) 143, 426, 567, 665, 687, 1025, 1253, 1472
SstI GAGCTC 1 cut(s) 207
StuI AGGCCT 1 cut(s) 251
StyD4I CCNGG 8 cut(s) 541, 891, 1055, 1290, 1402, 1403, 1610, 1611
TaaI ACNGT 9 cut(s) 63, 235, 782, 1209, 1320, 1365, 1682, 1720, 1868
TaiI ACGT 2 cut(s) 158, 1540
TaqI TCGA 6 cut(s) 246, 254, 293, 904, 1091, 1525
TatI WGTACW 4 cut(s) 102, 819, 1320, 1468
TauI GCSGC 1 cut(s) 364
TfiI GAWTC 9 cut(s) 497, 555, 661, 896, 1138, 1243, 1565, 1775, 1831
TscAI CASTG 6 cut(s) 394, 651, 787, 792, 1207, 1348
TseFI GTSAC 4 cut(s) 1020, 1378, 1533, 1804
TseI GCWGC 3 cut(s) 168, 422, 953
Tsp45I GTSAC 4 cut(s) 1020, 1378, 1533, 1804
TspGWI ACGGA 4 cut(s) 467, 977, 1029, 1758
TspMI CCCGGG 2 cut(s) 1403, 1611
TspRI CASTG 6 cut(s) 394, 651, 787, 792, 1207, 1348
Vha464I CTTAAG 1 cut(s) 115
VneI GTGCAC 1 cut(s) 1275
VpaK11BI GGWCC 2 cut(s) 908, 1205
XapI RAATTY 7 cut(s) 197, 295, 433, 743, 1306, 1350, 1455
XbaI TCTAGA 2 cut(s) 664, 1252
XceI RCATGY 2 cut(s) 316, 1162
XcmI CCANNNNNNNNNTGG 1 cut(s) 1492
XhoI CTCGAG 2 cut(s) 253, 903
XmaI CCCGGG 2 cut(s) 1403, 1611
XmiI GTMKAC 1 cut(s) 230
XspI CTAG 8 cut(s) 143, 426, 567, 665, 687, 1025, 1253, 1472
ZrmI AGTACT 2 cut(s) 104, 1470
Zsp2I ATGCAT 1 cut(s) 1889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.