disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_samantha | Rh4AG076200 Rh4CG080900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 235 |
| AciI | CCGC | 1 cut(s) | 66 |
| AclWI | GGATC | 1 cut(s) | 324 |
| AcoI | YGGCCR | 1 cut(s) | 362 |
| AcsI | RAATTY | 1 cut(s) | 176 |
| AcuI | CTGAAG | 1 cut(s) | 242 |
| AfaI | GTAC | 1 cut(s) | 126 |
| AgsI | TTSAA | 2 cut(s) | 331, 355 |
| AluBI | AGCT | 2 cut(s) | 163, 190 |
| AluI | AGCT | 2 cut(s) | 163, 190 |
| Alw26I | GTCTC | 1 cut(s) | 142 |
| AlwI | GGATC | 1 cut(s) | 324 |
| AoxI | GGCC | 1 cut(s) | 362 |
| ApoI | RAATTY | 1 cut(s) | 176 |
| AsuHPI | GGTGA | 2 cut(s) | 20, 172 |
| BaeGI | GKGCMC | 1 cut(s) | 106 |
| BalI | TGGCCA | 1 cut(s) | 364 |
| BceAI | ACGGC | 1 cut(s) | 61 |
| BcoDI | GTCTC | 1 cut(s) | 142 |
| BfaI | CTAG | 1 cut(s) | 191 |
| BmsI | GCATC | 2 cut(s) | 53, 130 |
| BpuEI | CTTGAG | 1 cut(s) | 233 |
| BseSI | GKGCMC | 1 cut(s) | 106 |
| BsgI | GTGCAG | 1 cut(s) | 364 |
| BshFI | GGCC | 1 cut(s) | 364 |
| BsmAI | GTCTC | 1 cut(s) | 142 |
| BsmBI | CGTCTC | 1 cut(s) | 142 |
| BsnI | GGCC | 1 cut(s) | 364 |
| Bsp1286I | GDGCHC | 1 cut(s) | 106 |
| Bsp143I | GATC | 3 cut(s) | 277, 316, 387 |
| BspACI | CCGC | 1 cut(s) | 66 |
| BspANI | GGCC | 1 cut(s) | 364 |
| BspPI | GGATC | 1 cut(s) | 324 |
| BssMI | GATC | 3 cut(s) | 277, 316, 387 |
| Bst4CI | ACNGT | 3 cut(s) | 94, 124, 371 |
| BstKTI | GATC | 3 cut(s) | 280, 319, 390 |
| BstMAI | GTCTC | 1 cut(s) | 142 |
| BstMBI | GATC | 3 cut(s) | 277, 316, 387 |
| BstNSI | RCATGY | 2 cut(s) | 131, 326 |
| BstSLI | GKGCMC | 1 cut(s) | 106 |
| BsuRI | GGCC | 1 cut(s) | 364 |
| BtsIMutI | CAGTG | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 125 |
| CviAII | CATG | 6 cut(s) | 128, 132, 242, 248, 275, 323 |
| CviJI | RGCY | 6 cut(s) | 56, 163, 190, 204, 261, 364 |
| CviKI_1 | RGCY | 6 cut(s) | 56, 163, 190, 204, 261, 364 |
| CviQI | GTAC | 1 cut(s) | 125 |
| DpnI | GATC | 3 cut(s) | 279, 318, 389 |
| DpnII | GATC | 3 cut(s) | 277, 316, 387 |
| EaeI | YGGCCR | 1 cut(s) | 362 |
| Eco57I | CTGAAG | 1 cut(s) | 242 |
| EcoRI | GAATTC | 1 cut(s) | 176 |
| EcoT22I | ATGCAT | 2 cut(s) | 133, 145 |
| Esp3I | CGTCTC | 1 cut(s) | 142 |
| FaeI | CATG | 6 cut(s) | 131, 135, 245, 251, 278, 326 |
| FaiI | YATR | 8 cut(s) | 129, 133, 197, 243, 249, 276, 324, 386 |
| FatI | CATG | 6 cut(s) | 127, 131, 241, 247, 274, 322 |
| FblI | GTMKAC | 1 cut(s) | 235 |
| FspBI | CTAG | 1 cut(s) | 191 |
| HaeIII | GGCC | 1 cut(s) | 364 |
| Hin1II | CATG | 6 cut(s) | 131, 135, 245, 251, 278, 326 |
| HindIII | AAGCTT | 1 cut(s) | 161 |
| HinfI | GANTC | 1 cut(s) | 227 |
| HphI | GGTGA | 2 cut(s) | 20, 172 |
| Hpy166II | GTNNAC | 1 cut(s) | 236 |
| Hpy8I | GTNNAC | 1 cut(s) | 236 |
| HpyAV | CCTTC | 1 cut(s) | 217 |
| HpyCH4III | ACNGT | 3 cut(s) | 94, 124, 371 |
| HpyCH4IV | ACGT | 2 cut(s) | 151, 301 |
| HpyCH4V | TGCA | 6 cut(s) | 98, 131, 143, 241, 274, 381 |
| HpySE526I | ACGT | 2 cut(s) | 151, 301 |
| Hsp92II | CATG | 6 cut(s) | 131, 135, 245, 251, 278, 326 |
| Kzo9I | GATC | 3 cut(s) | 277, 316, 387 |
| LpnPI | CCDG | 1 cut(s) | 119 |
| LweI | GCATC | 2 cut(s) | 53, 130 |
| MaeI | CTAG | 1 cut(s) | 191 |
| MaeII | ACGT | 2 cut(s) | 151, 301 |
| MaeIII | GTNAC | 1 cut(s) | 88 |
| MalI | GATC | 3 cut(s) | 279, 318, 389 |
| MboI | GATC | 3 cut(s) | 277, 316, 387 |
| MboII | GAAGA | 2 cut(s) | 129, 185 |
| MhlI | GDGCHC | 1 cut(s) | 106 |
| MlsI | TGGCCA | 1 cut(s) | 364 |
| MluCI | AATT | 4 cut(s) | 176, 252, 269, 332 |
| MluNI | TGGCCA | 1 cut(s) | 364 |
| MnlI | CCTC | 1 cut(s) | 62 |
| Mox20I | TGGCCA | 1 cut(s) | 364 |
| Mph1103I | ATGCAT | 2 cut(s) | 133, 145 |
| MscI | TGGCCA | 1 cut(s) | 364 |
| MseI | TTAA | 2 cut(s) | 18, 335 |
| MslI | CAYNNNNRTG | 1 cut(s) | 246 |
| Msp20I | TGGCCA | 1 cut(s) | 364 |
| NdeII | GATC | 3 cut(s) | 277, 316, 387 |
| NlaIII | CATG | 6 cut(s) | 131, 135, 245, 251, 278, 326 |
| NmuCI | GTSAC | 1 cut(s) | 88 |
| NsiI | ATGCAT | 2 cut(s) | 133, 145 |
| NspI | RCATGY | 2 cut(s) | 131, 326 |
| PfeI | GAWTC | 1 cut(s) | 227 |
| RsaI | GTAC | 1 cut(s) | 126 |
| RsaNI | GTAC | 1 cut(s) | 125 |
| RseI | CAYNNNNRTG | 1 cut(s) | 246 |
| SaqAI | TTAA | 2 cut(s) | 18, 335 |
| Sau3AI | GATC | 3 cut(s) | 277, 316, 387 |
| SduI | GDGCHC | 1 cut(s) | 106 |
| SetI | ASST | 6 cut(s) | 10, 73, 154, 165, 192, 304 |
| SfaNI | GCATC | 2 cut(s) | 53, 130 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 246 |
| SmlI | CTYRAG | 1 cut(s) | 212 |
| SmoI | CTYRAG | 1 cut(s) | 212 |
| Sse9I | AATT | 4 cut(s) | 176, 252, 269, 332 |
| SsiI | CCGC | 1 cut(s) | 66 |
| SspMI | CTAG | 1 cut(s) | 191 |
| TaaI | ACNGT | 3 cut(s) | 94, 124, 371 |
| TaiI | ACGT | 2 cut(s) | 154, 304 |
| TasI | AATT | 4 cut(s) | 176, 252, 269, 332 |
| TatI | WGTACW | 1 cut(s) | 124 |
| TfiI | GAWTC | 1 cut(s) | 227 |
| Tru1I | TTAA | 2 cut(s) | 18, 335 |
| Tru9I | TTAA | 2 cut(s) | 18, 335 |
| TscAI | CASTG | 1 cut(s) | 97 |
| TseFI | GTSAC | 1 cut(s) | 88 |
| Tsp45I | GTSAC | 1 cut(s) | 88 |
| TspDTI | ATGAA | 2 cut(s) | 264, 297 |
| TspRI | CASTG | 1 cut(s) | 97 |
| XapI | RAATTY | 1 cut(s) | 176 |
| XceI | RCATGY | 2 cut(s) | 131, 326 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 254 |
| XmiI | GTMKAC | 1 cut(s) | 235 |
| XspI | CTAG | 1 cut(s) | 191 |
| Zsp2I | ATGCAT | 2 cut(s) | 133, 145 |