Rh4CG192800
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0034191
Physical Location & Seq
Reverse (-)
41415571 .. 41418530
2960 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG192800.1

Sequence Viewer

Length: 2052 bp
ATGTCCAAGCTCCTCGAGAACCTCAAACCCGGCGGCTGGTCCTCCTCCGCATCCTACTGCACCTGGGACGGCGTCAAATGCGACTCCGATACTTCCAAACGAGTCACCTCCATCAGCTTAGCCTCCAACTCCCTTTCCGGCCCTCTCCCTTCAAATCTCAACGAACTCACCGAGCTCACCACTCTCTCCCTCCAAAGCAACGCTCTCTCCGGCGCCTTACCTTCCCTCGCCAACCTCTCCAACCTCCAAGAAGTCTACCTCGACACCAATAACTTCACTTCCATTCCCCTCGGCTGCTTCGGAGGCTTGACCGGCTTGCAGACCTTGAGCATGAGCAACAATGTCGATCTTGCCCCTTGGGCGTTCCCATCTGATCTTATCCAGTCTACCAGCCTGGTCACTCTTCAAGCAGGTAGCACCAACATGTATGGCAGCATTCCTGATATTTTCGGCTCTTTTGCAAACTTGCAAAATGTGAGATTGTCTTACAACAATCTTACTGGGCCTCTGCCCAAATCATTTTCTGGATCTGGGATTCAAAATCTCTGGATTAACAATCAGGCCGTTGGGTTATCTGGTACCGTTGAGGTTCTGTCCAACATGACTTCGTTGATGCAAGCGTGGCTGCATAAGAATCAGTTCACTGGTACAATCCCGGACCTGTCGCAATGTACTGCTCTCTTTGATCTTCAGCTTCGTGACAATGTCTTTACTGGGATGGTGCCGGCGACGTTGACGGCGTTGTCTTCTTTGCAAAATGTTTCTTTGGACAACAATAAGCTTCAGGGTCCTATGCTGGATTTTGGGTCCAAGGTGAAGGTCACTCTTGATGGTAATAGCTTTTGCAAAACCACTGCTGGGCCTTGTGATCCACAGGTCACTACGCTGCTTCAGGTTGCAGGGGCTTTTGGGTACCCGGAATTATTGGCTGAGTCTTGGACGGGAGACGATGCATGCGGAGGGTGGAGCTTCGTTATTTGTGATGCTCAGAAGGTAGTTACAGTGAATCTGGACAACAAGCATCTCAATGGGACTATTTCACCTGCCTTTGCCAACCTCACATCGTTGAAAACTTTGGTGCTGAAAAACAACAACTTGACGGGTCCGATACCGGCTACCCTGACAACATTACCTCAGCTGGCGGTTTTTGATGCTTCCAATAACAATTTATATGGGGACATTCCGAAATTTCCTTCTAGGGTGAAGTTGACTACTAGTGGTAATCCATTGATTGGGACTACGCCGAGCTCTGGAGGTGGAGGGAGTGCACCTCCTGGTAACAACTCAACTGCACCGGGTGGGAGTCCGTCTCCATCATCCAACGGTTCTTCAGTGTCGCCCGGTATGATTGCTGGTATAGTTATTGCTGTTGCTATTTTCATTGGAGTGTTGTTGTTTGTATTCATCAAATGTTATATGAGTAAAAGGGATAGGAAGTTTGGAAGAGTGGATAATACGCTGAATGGAATTGAAATTGCCAAGAGTGACGAAACCAGTTGTGCAAATGGGTACAATGGAGTAGCAAGGACATTCGGGTATATTGCACCAGAATATGCAGCTACCGGCAAAGTGACAACAAAGGTGGATGTTTATGCATTTGGAGTAGTGTTGATGGAGTTGATGAGTGGTCGAAAAGCTGTAGATGATACCATGCCAGATGAAAGGTCTCATTTGGTGTCATGGTTTCGCAGTGTCCTTGTCAACAAAGAAAACATTCCCAACTCCATCGACCAAACTCTTGACGCTGATGAGGAGACAATGGAGAGCATATACAAAGTTTCTGAGCTTGCAGAACACTGCACAGCTCCTGAGTCATATCAGAGACCAGACATGGGCCATGCAGTCAACATCTTGGGTCCTCTTGTTGAGCACTGGAAACCTACAAGCCACGAAGAAGATGAAGGTAATTCAAGAATGTTTGATGATCTGTCCTATATGCACATGAACCTTTCTCAAGCAGCGGAAAGATGGCAAGCCGATGAAGGTACTTCAAGGATGTTTGATGATCTGTCCTCTAGCCATACTCAATCAAGCATCCCTTCAAAACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

683

Amino Acids

72.94

Weight (kDa)

4.88

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 80 - 114 7e-06 Leucine rich repeat
LRR_8 PF13855 332 - 390 1e-06 Leucine rich repeat
Pkinase PF00069 504 - 615 3.8e-07 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 510 - 612 4.1e-07 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0034191)

Species Orthologous Gene IDs
rosa_samantha Rh4BG180800 Rh4CG192800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1051
AasI GACNNNNNNGTC 1 cut(s) 742
Acc36I ACCTGC 2 cut(s) 401, 1051
Acc65I GGTACC 2 cut(s) 578, 912
AccB1I GGYRCC 4 cut(s) 212, 578, 721, 912
AccB7I CCANNNNNTGG 1 cut(s) 1232
AccI GTMKAC 2 cut(s) 255, 386
AciI CCGC 5 cut(s) 33, 48, 957, 1142, 1961
AclWI GGATC 2 cut(s) 535, 863
AcsI RAATTY 1 cut(s) 1187
AcuI CTGAAG 4 cut(s) 674, 767, 875, 1314
AcyI GRCGYC 2 cut(s) 72, 213
AdeI CACNNNGTG 1 cut(s) 1298
AfaI GTAC 6 cut(s) 580, 649, 673, 914, 1511, 1987
AfiI CCNNNNNNNGG 5 cut(s) 36, 858, 1232, 1250, 1832
AflIII ACRYGT 1 cut(s) 423
AgsI TTSAA 8 cut(s) 153, 407, 539, 1069, 1472, 1911, 1992, 2043
AhlI ACTAGT 1 cut(s) 1214
AjnI CCWGG 3 cut(s) 62, 393, 1273
Alw21I GWGCWC 4 cut(s) 177, 1250, 1270, 1872
Alw26I GTCTC 5 cut(s) 939, 1314, 1671, 1748, 1816
Alw44I GTGCAC 1 cut(s) 1266
AlwI GGATC 2 cut(s) 535, 863
AlwNI CAGNNNCTG 1 cut(s) 1808
Ama87I CYCGRG 1 cut(s) 14
AoxI GGCC 5 cut(s) 139, 503, 561, 860, 1834
ApaLI GTGCAC 1 cut(s) 1266
ApeKI GCWGC 6 cut(s) 294, 432, 625, 886, 1556, 1958
ApoI RAATTY 1 cut(s) 1187
Asp700I GAANNNNTTC 2 cut(s) 638, 1713
Asp718I GGTACC 2 cut(s) 578, 912
AspLEI GCGC 1 cut(s) 215
AsuC2I CCSGG 5 cut(s) 30, 656, 917, 1296, 1341
AsuHPI GGTGA 6 cut(s) 97, 160, 169, 826, 1032, 1213
AvaI CYCGRG 1 cut(s) 14
AvaII GGWCC 6 cut(s) 39, 658, 788, 807, 1103, 1856
BaeGI GKGCMC 1 cut(s) 1270
BanI GGYRCC 4 cut(s) 212, 578, 721, 912
BanII GRGCYC 2 cut(s) 177, 1250
BbsI GAAGAC 1 cut(s) 738
Bbv12I GWGCWC 4 cut(s) 177, 1250, 1270, 1872
BbvCI CCTCAGC 1 cut(s) 1134
BbvI GCAGC 6 cut(s) 281, 444, 612, 873, 1568, 1970
BccI CCATC 8 cut(s) 119, 376, 712, 824, 1321, 1606, 1733, 1962
BceAI ACGGC 3 cut(s) 85, 548, 753
BcgI CGANNNNNNTGC 2 cut(s) 325, 359
BciT130I CCWGG 3 cut(s) 64, 395, 1275
BcnI CCSGG 5 cut(s) 30, 656, 917, 1296, 1341
BcoDI GTCTC 5 cut(s) 939, 1314, 1671, 1748, 1816
BcuI ACTAGT 1 cut(s) 1214
BfaI CTAG 3 cut(s) 1197, 1215, 2016
BfmI CTRYAG 1 cut(s) 1638
BfoI RGCGCY 1 cut(s) 216
BfuAI ACCTGC 2 cut(s) 401, 1051
BglI GCCNNNNNGGC 1 cut(s) 359
BisI GCNGC 7 cut(s) 34, 295, 433, 626, 887, 1557, 1959
BlpI GCTNAGC 1 cut(s) 118
BlsI GCNGC 7 cut(s) 35, 296, 434, 627, 888, 1558, 1960
Bme1390I CCNGG 8 cut(s) 30, 64, 395, 656, 917, 1275, 1296, 1341
Bme18I GGWCC 6 cut(s) 39, 658, 788, 807, 1103, 1856
BmeT110I CYCGRG 1 cut(s) 14
BmiI GGNNCC 8 cut(s) 214, 580, 723, 789, 808, 914, 1104, 1857
BmrFI CCNGG 8 cut(s) 30, 64, 395, 656, 917, 1275, 1296, 1341
BmrI ACTGGG 2 cut(s) 510, 723
BmsI GCATC 7 cut(s) 59, 603, 940, 973, 1030, 1141, 2043
BmuI ACTGGG 2 cut(s) 510, 723
BpiI GAAGAC 1 cut(s) 738
BplI GAGNNNNNCTC 4 cut(s) 1255, 1287, 1294, 1326
BpmI CTGGAG 1 cut(s) 1272
Bpu10I CCTNAGC 1 cut(s) 1134
Bpu1102I GCTNAGC 1 cut(s) 118
BpuEI CTTGAG 2 cut(s) 346, 1938
BpuMI CCSGG 5 cut(s) 30, 656, 917, 1296, 1341
BsaHI GRCGYC 2 cut(s) 72, 213
BsaI GGTCTC 2 cut(s) 1671, 1816
BsaJI CCNNGG 4 cut(s) 63, 289, 356, 810
BsaXI ACNNNNNCTCC 2 cut(s) 191, 221
Bsc4I CCNNNNNNNGG 5 cut(s) 36, 858, 1232, 1250, 1832
Bse118I RCCGGY 4 cut(s) 311, 724, 1111, 1562
Bse1I ACTGG 6 cut(s) 382, 505, 649, 718, 1494, 1877
Bse3DI GCAATG 1 cut(s) 674
BseBI CCWGG 3 cut(s) 64, 395, 1275
BseDI CCNNGG 4 cut(s) 63, 289, 356, 810
BseGI GGATG 6 cut(s) 50, 723, 1316, 1591, 2001, 2034
BseLI CCNNNNNNNGG 5 cut(s) 36, 858, 1232, 1250, 1832
BseMI GCAATG 1 cut(s) 674
BseMII CTCAG 5 cut(s) 921, 1001, 1148, 1773, 1800
BseNI ACTGG 6 cut(s) 382, 505, 649, 718, 1494, 1877
BseRI GAGGAG 2 cut(s) 34, 1766
BseSI GKGCMC 1 cut(s) 1270
BseXI GCAGC 6 cut(s) 281, 444, 612, 873, 1568, 1970
BseYI CCCAGC 1 cut(s) 857
BsgI GTGCAG 3 cut(s) 43, 1275, 1783
BshFI GGCC 5 cut(s) 141, 505, 563, 862, 1836
BshNI GGYRCC 4 cut(s) 212, 578, 721, 912
BsiHKAI GWGCWC 4 cut(s) 177, 1250, 1270, 1872
BsiHKCI CYCGRG 1 cut(s) 14
BslFI GGGAC 4 cut(s) 80, 1045, 1190, 1249
BslI CCNNNNNNNGG 5 cut(s) 36, 858, 1232, 1250, 1832
BsmAI GTCTC 5 cut(s) 939, 1314, 1671, 1748, 1816
BsmBI CGTCTC 2 cut(s) 939, 1314
BsmFI GGGAC 4 cut(s) 80, 1045, 1190, 1249
BsmI GAATGC 1 cut(s) 435
BsnI GGCC 5 cut(s) 141, 505, 563, 862, 1836
Bso31I GGTCTC 2 cut(s) 1671, 1816
BsoBI CYCGRG 1 cut(s) 14
Bsp1286I GDGCHC 4 cut(s) 177, 1250, 1270, 1872
Bsp143I GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
Bsp1720I GCTNAGC 1 cut(s) 118
BspACI CCGC 5 cut(s) 33, 48, 957, 1142, 1961
BspANI GGCC 5 cut(s) 141, 505, 563, 862, 1836
BspCNI CTCAG 5 cut(s) 922, 1000, 1147, 1774, 1801
BspLI GGNNCC 8 cut(s) 214, 580, 723, 789, 808, 914, 1104, 1857
BspMI ACCTGC 2 cut(s) 401, 1051
BspPI GGATC 2 cut(s) 535, 863
BspT107I GGYRCC 4 cut(s) 212, 578, 721, 912
BspTNI GGTCTC 2 cut(s) 1671, 1816
BsrDI GCAATG 1 cut(s) 674
BsrFI RCCGGY 4 cut(s) 311, 724, 1111, 1562
BsrI ACTGG 6 cut(s) 382, 505, 649, 718, 1494, 1877
BssAI RCCGGY 4 cut(s) 311, 724, 1111, 1562
BssECI CCNNGG 4 cut(s) 63, 289, 356, 810
BssMI GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
BssNI GRCGYC 2 cut(s) 72, 213
BssT1I CCWWGG 2 cut(s) 356, 810
Bst2UI CCWGG 3 cut(s) 64, 395, 1275
Bst4CI ACNGT 3 cut(s) 583, 1003, 1325
Bst6I CTCTTC 2 cut(s) 408, 1438
BstACI GRCGYC 2 cut(s) 72, 213
BstC8I GCNNGC 7 cut(s) 317, 618, 726, 955, 1140, 1788, 1974
BstDEI CTNAG 6 cut(s) 118, 930, 987, 1134, 1782, 1809
BstF5I GGATG 6 cut(s) 50, 723, 1316, 1591, 2001, 2034
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 1 cut(s) 215
BstKTI GATC 7 cut(s) 349, 376, 530, 688, 871, 1927, 2008
BstMAI GTCTC 5 cut(s) 939, 1314, 1671, 1748, 1816
BstMBI GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
BstMWI GCNNNNNNNGC 5 cut(s) 78, 303, 312, 359, 622
BstNI CCWGG 3 cut(s) 64, 395, 1275
BstNSI RCATGY 2 cut(s) 427, 957
BstSCI CCNGG 8 cut(s) 28, 62, 393, 654, 915, 1273, 1294, 1339
BstSFI CTRYAG 1 cut(s) 1638
BstSLI GKGCMC 1 cut(s) 1270
BstV1I GCAGC 6 cut(s) 281, 444, 612, 873, 1568, 1970
BstV2I GAAGAC 1 cut(s) 738
BstX2I RGATCY 1 cut(s) 527
BstYI RGATCY 1 cut(s) 527
BsuRI GGCC 5 cut(s) 141, 505, 563, 862, 1836
BtsCI GGATG 6 cut(s) 50, 723, 1316, 1591, 2001, 2034
BtsI GCAGTG 3 cut(s) 852, 1696, 1795
BtsIMutI CAGTG 7 cut(s) 642, 852, 1008, 1338, 1696, 1795, 1870
BveI ACCTGC 2 cut(s) 401, 1051
Cac8I GCNNGC 7 cut(s) 317, 618, 726, 955, 1140, 1788, 1974
CaiI CAGNNNCTG 1 cut(s) 1808
CfoI GCGC 1 cut(s) 215
Cfr10I RCCGGY 4 cut(s) 311, 724, 1111, 1562
CseI GACGC 2 cut(s) 61, 1751
Csp6I GTAC 6 cut(s) 579, 648, 672, 913, 1510, 1986
CspCI CAANNNNNGTGG 2 cut(s) 1563, 1598
CviAII CATG 9 cut(s) 331, 424, 601, 954, 1651, 1680, 1831, 1838, 1942
CviQI GTAC 6 cut(s) 579, 648, 672, 913, 1510, 1986
DdeI CTNAG 6 cut(s) 118, 930, 987, 1134, 1782, 1809
DinI GGCGCC 1 cut(s) 214
DpnI GATC 7 cut(s) 348, 375, 529, 687, 870, 1926, 2007
DpnII GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
DraIII CACNNNGTG 1 cut(s) 1298
DrdI GACNNNNNNGTC 1 cut(s) 742
DseDI GACNNNNNNGTC 1 cut(s) 742
Eam1104I CTCTTC 2 cut(s) 408, 1438
EarI CTCTTC 2 cut(s) 408, 1438
Ecl136II GAGCTC 2 cut(s) 175, 1248
Eco130I CCWWGG 2 cut(s) 356, 810
Eco24I GRGCYC 2 cut(s) 177, 1250
Eco31I GGTCTC 2 cut(s) 1671, 1816
Eco47I GGWCC 6 cut(s) 39, 658, 788, 807, 1103, 1856
Eco53kI GAGCTC 2 cut(s) 175, 1248
Eco57I CTGAAG 4 cut(s) 674, 767, 875, 1314
Eco88I CYCGRG 1 cut(s) 14
EcoICRI GAGCTC 2 cut(s) 175, 1248
EcoO109I RGGNCCY 2 cut(s) 788, 1856
EcoRII CCWGG 3 cut(s) 62, 393, 1273
EcoT14I CCWWGG 2 cut(s) 356, 810
EcoT22I ATGCAT 2 cut(s) 955, 1597
EcoT38I GRGCYC 2 cut(s) 177, 1250
EgeI GGCGCC 1 cut(s) 214
EheI GGCGCC 1 cut(s) 214
ErhI CCWWGG 2 cut(s) 356, 810
Esp3I CGTCTC 2 cut(s) 939, 1314
FaeI CATG 9 cut(s) 334, 427, 604, 957, 1654, 1683, 1834, 1841, 1945
FalI AAGNNNNNCTT 1 cut(s) 2023
FaqI GGGAC 4 cut(s) 80, 1045, 1190, 1249
FatI CATG 9 cut(s) 330, 423, 600, 953, 1650, 1679, 1830, 1837, 1941
FblI GTMKAC 2 cut(s) 255, 386
Fnu4HI GCNGC 7 cut(s) 34, 295, 433, 626, 887, 1557, 1959
FokI GGATG 6 cut(s) 37, 730, 1303, 1598, 2008, 2021
FriOI GRGCYC 2 cut(s) 177, 1250
Fsp4HI GCNGC 7 cut(s) 34, 295, 433, 626, 887, 1557, 1959
FspBI CTAG 3 cut(s) 1197, 1215, 2016
GlaI GCGC 1 cut(s) 214
GluI GCNGC 7 cut(s) 34, 295, 433, 626, 887, 1557, 1959
GsaI CCCAGC 1 cut(s) 861
GsuI CTGGAG 1 cut(s) 1272
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 5 cut(s) 141, 505, 563, 862, 1836
HgaI GACGC 2 cut(s) 61, 1751
HhaI GCGC 1 cut(s) 215
Hin1I GRCGYC 2 cut(s) 72, 213
Hin1II CATG 9 cut(s) 334, 427, 604, 957, 1654, 1683, 1834, 1841, 1945
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HincII GTYRAC 4 cut(s) 735, 1209, 1702, 1846
HindII GTYRAC 4 cut(s) 735, 1209, 1702, 1846
HindIII AAGCTT 1 cut(s) 779
HinfI GANTC 8 cut(s) 83, 102, 535, 634, 932, 1006, 1303, 1811
HphI GGTGA 6 cut(s) 97, 160, 169, 826, 1032, 1213
Hpy166II GTNNAC 8 cut(s) 256, 387, 642, 735, 1209, 1268, 1702, 1846
Hpy188I TCNGA 8 cut(s) 88, 302, 373, 990, 1107, 1185, 1783, 1821
Hpy8I GTNNAC 8 cut(s) 256, 387, 642, 735, 1209, 1268, 1702, 1846
Hpy99I CGWCG 1 cut(s) 733
HpyAV CCTTC 8 cut(s) 159, 231, 811, 985, 1203, 1895, 1976, 2049
HpyCH4III ACNGT 3 cut(s) 583, 1003, 1325
HpyCH4IV ACGT 1 cut(s) 731
HpyF10VI GCNNNNNNNGC 5 cut(s) 78, 303, 312, 359, 622
HpyF3I CTNAG 6 cut(s) 118, 930, 987, 1134, 1782, 1809
HpySE526I ACGT 1 cut(s) 731
Hsp92I GRCGYC 2 cut(s) 72, 213
Hsp92II CATG 9 cut(s) 334, 427, 604, 957, 1654, 1683, 1834, 1841, 1945
HspAI GCGC 1 cut(s) 213
KasI GGCGCC 1 cut(s) 212
KpnI GGTACC 2 cut(s) 582, 916
KroI GCCGGC 1 cut(s) 724
KroNI GCCGGC 1 cut(s) 726
Kzo9I GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
LmnI GCTCC 3 cut(s) 15, 966, 1810
Lsp1109I GCAGC 6 cut(s) 281, 444, 612, 873, 1568, 1970
LweI GCATC 7 cut(s) 59, 603, 940, 973, 1030, 1141, 2043
MaeI CTAG 3 cut(s) 1197, 1215, 2016
MaeII ACGT 1 cut(s) 731
MaeIII GTNAC 9 cut(s) 103, 397, 698, 820, 877, 997, 1277, 1484, 1570
MalI GATC 7 cut(s) 348, 375, 529, 687, 870, 1926, 2007
MboI GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
MboII GAAGA 7 cut(s) 395, 680, 738, 1320, 1455, 1904, 1907
MflI RGATCY 1 cut(s) 527
MhlI GDGCHC 4 cut(s) 177, 1250, 1270, 1872
MluCI AATT 6 cut(s) 920, 1165, 1187, 1467, 1473, 1906
Mly113I GGCGCC 1 cut(s) 213
MlyI GAGTC 5 cut(s) 77, 111, 941, 1312, 1820
MmeI TCCRAC 4 cut(s) 150, 264, 621, 1344
Mph1103I ATGCAT 2 cut(s) 955, 1597
MroNI GCCGGC 1 cut(s) 724
MroXI GAANNNNTTC 2 cut(s) 638, 1713
MseI TTAA 1 cut(s) 552
MslI CAYNNNNRTG 3 cut(s) 422, 1026, 1385
MspA1I CMGCKG 2 cut(s) 1138, 1961
MspR9I CCNGG 8 cut(s) 30, 64, 395, 656, 917, 1275, 1296, 1341
Mva1269I GAATGC 1 cut(s) 435
MvaI CCWGG 3 cut(s) 64, 395, 1275
MwoI GCNNNNNNNGC 5 cut(s) 78, 303, 312, 359, 622
NaeI GCCGGC 1 cut(s) 726
NarI GGCGCC 1 cut(s) 213
NciI CCSGG 5 cut(s) 30, 656, 917, 1296, 1341
NdeII GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
NgoMIV GCCGGC 1 cut(s) 724
NlaIII CATG 9 cut(s) 334, 427, 604, 957, 1654, 1683, 1834, 1841, 1945
NlaIV GGNNCC 8 cut(s) 214, 580, 723, 789, 808, 914, 1104, 1857
NmeAIII GCCGAG 2 cut(s) 270, 1269
NmuCI GTSAC 7 cut(s) 103, 397, 698, 820, 877, 1484, 1570
NsiI ATGCAT 2 cut(s) 955, 1597
NspI RCATGY 2 cut(s) 427, 957
PaeI GCATGC 1 cut(s) 957
PaeR7I CTCGAG 1 cut(s) 14
PaqCI CACCTGC 1 cut(s) 1051
PciI ACATGT 1 cut(s) 423
PcsI WCGNNNNNNNCGW 2 cut(s) 168, 737
PctI GAATGC 1 cut(s) 435
PdiI GCCGGC 1 cut(s) 726
PdmI GAANNNNTTC 2 cut(s) 638, 1713
PfeI GAWTC 3 cut(s) 535, 634, 1006
PflFI GACNNNGTC 2 cut(s) 71, 704
PflMI CCANNNNNTGG 1 cut(s) 1232
PfoI TCCNGGA 1 cut(s) 654
PkrI GCNGC 7 cut(s) 35, 296, 434, 627, 888, 1558, 1960
PleI GAGTC 5 cut(s) 77, 110, 940, 1311, 1819
PluTI GGCGCC 1 cut(s) 216
PpsI GAGTC 5 cut(s) 77, 110, 940, 1311, 1819
PpuMI RGGWCCY 2 cut(s) 788, 1856
PscI ACATGT 1 cut(s) 423
Psp124BI GAGCTC 2 cut(s) 177, 1250
Psp5II RGGWCCY 2 cut(s) 788, 1856
Psp6I CCWGG 3 cut(s) 62, 393, 1273
PspFI CCCAGC 1 cut(s) 857
PspGI CCWGG 3 cut(s) 62, 393, 1273
PspN4I GGNNCC 8 cut(s) 214, 580, 723, 789, 808, 914, 1104, 1857
PspPPI RGGWCCY 2 cut(s) 788, 1856
PstNI CAGNNNCTG 1 cut(s) 1808
PsuI RGATCY 1 cut(s) 527
PsyI GACNNNGTC 2 cut(s) 71, 704
PvuII CAGCTG 1 cut(s) 1138
RsaI GTAC 6 cut(s) 580, 649, 673, 914, 1511, 1987
RsaNI GTAC 6 cut(s) 579, 648, 672, 913, 1510, 1986
RseI CAYNNNNRTG 3 cut(s) 422, 1026, 1385
SacI GAGCTC 2 cut(s) 177, 1250
SaqAI TTAA 1 cut(s) 552
SatI GCNGC 7 cut(s) 34, 295, 433, 626, 887, 1557, 1959
Sau3AI GATC 7 cut(s) 346, 373, 527, 685, 868, 1924, 2005
SchI GAGTC 5 cut(s) 77, 111, 941, 1312, 1820
ScrFI CCNGG 8 cut(s) 30, 64, 395, 656, 917, 1275, 1296, 1341
SduI GDGCHC 4 cut(s) 177, 1250, 1270, 1872
SfaNI GCATC 7 cut(s) 59, 603, 940, 973, 1030, 1141, 2043
SfcI CTRYAG 1 cut(s) 1638
SfoI GGCGCC 1 cut(s) 214
Sfr274I CTCGAG 1 cut(s) 14
SinI GGWCC 6 cut(s) 39, 658, 788, 807, 1103, 1856
SlaI CTCGAG 1 cut(s) 14
SmiMI CAYNNNNRTG 3 cut(s) 422, 1026, 1385
SmlI CTYRAG 3 cut(s) 14, 325, 1953
SmoI CTYRAG 3 cut(s) 14, 325, 1953
SpeI ACTAGT 1 cut(s) 1214
SphI GCATGC 1 cut(s) 957
Sse9I AATT 6 cut(s) 920, 1165, 1187, 1467, 1473, 1906
SsiI CCGC 5 cut(s) 33, 48, 957, 1142, 1961
SspDI GGCGCC 1 cut(s) 212
SspMI CTAG 3 cut(s) 1197, 1215, 2016
SstI GAGCTC 2 cut(s) 177, 1250
StyD4I CCNGG 8 cut(s) 28, 62, 393, 654, 915, 1273, 1294, 1339
StyI CCWWGG 2 cut(s) 356, 810
TaaI ACNGT 3 cut(s) 583, 1003, 1325
TaiI ACGT 1 cut(s) 734
TaqI TCGA 5 cut(s) 15, 261, 345, 1630, 1728
TasI AATT 6 cut(s) 920, 1165, 1187, 1467, 1473, 1906
TatI WGTACW 1 cut(s) 671
TauI GCSGC 1 cut(s) 36
TfiI GAWTC 3 cut(s) 535, 634, 1006
Tru1I TTAA 1 cut(s) 552
Tru9I TTAA 1 cut(s) 552
TscAI CASTG 7 cut(s) 649, 859, 1008, 1338, 1696, 1802, 1877
TseFI GTSAC 7 cut(s) 103, 397, 698, 820, 877, 1484, 1570
TseI GCWGC 6 cut(s) 294, 432, 625, 886, 1556, 1958
Tsp45I GTSAC 7 cut(s) 103, 397, 698, 820, 877, 1484, 1570
TspDTI ATGAA 6 cut(s) 1369, 1393, 1674, 1914, 1958, 1995
TspGWI ACGGA 1 cut(s) 1296
TspRI CASTG 7 cut(s) 649, 859, 1008, 1338, 1696, 1802, 1877
Tth111I GACNNNGTC 2 cut(s) 71, 704
Van91I CCANNNNNTGG 1 cut(s) 1232
VneI GTGCAC 1 cut(s) 1266
VpaK11BI GGWCC 6 cut(s) 39, 658, 788, 807, 1103, 1856
XapI RAATTY 1 cut(s) 1187
XceI RCATGY 2 cut(s) 427, 957
XhoI CTCGAG 1 cut(s) 14
XmiI GTMKAC 2 cut(s) 255, 386
XmnI GAANNNNTTC 2 cut(s) 638, 1713
XspI CTAG 3 cut(s) 1197, 1215, 2016
Zsp2I ATGCAT 2 cut(s) 955, 1597
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.