Rh4DG312800

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0034470
Physical Location & Seq
Forward (+)
53546344 .. 53549666
3323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG312800.1

Sequence Viewer

Length: 1827 bp
ATGGGTTCATTATTTTACCTCATGTTCATGTTTCTTTACCTAGTCTCCTCTGTTGAGTCCCAAGTTCAAGAGTTTGTTAGTATTGATTGTGGGGGTTCAAGTAATTCCAGTGACCCAAGTACTGGACTTTCATGGATTTCAGACATGGGTCTTATGAAACAGGGGACGTCAGTCCCATTACAAAACCCAAATGGAAACTTGGTACAGTATCAAACCCGCAGAGACTTTCCCATAGACAACAAAAAGTACTGCTACACCTTAAGCACACAAGAGAGGAGAAGGTATCTAGTTCGTGCAACGTTTCAATATGGCAGCCTGAAAAGCGAGGAGACATACCCAAAATTCGAGCTCTATTTGGATGCAACTATGTGGTCTACTGTTACTATTTTCGAGGCCTCGAGAACATATGTGAATGAAATGATCATTAGGGCGGCGTCGAATTCGGTTGATGTTTGCATGTGTTGTGCTACAACGGGTTTCCCATTCATTTCCACTTTGGAGTTGAGGCCTTTGAACATTTCTATGTATGCCACTGATTTTGAGGATGATTTCTTCTTGAAAGTGGCTGCTAGGGTGAATTTCGGTGCTCCGAGCACGGATGCCATAAGGTACCCTGATGATCCCTATGACCGGATTTGGGATTCTGATCTTGTGAAAAGGCAAAACTATCTGGTAGGGGTGGCTCCTGGTACAGAAAGAATCAATACATCTAGGAATGTGAATACAGGGAGCAGAGAATACCCACCTATGAAGGTGATGCAGACCGCGGTGGTTGGCACAAAAGGAACACTGAGCTACAGATTGAATCTAGATGGTTTCCCAGCAAATGCTAGAGCTTATGGTTTCTTTGCGGAAATAGAGGATTTGGGTGCCAATGAGAGTAGGAAATTCAGATTGGAGCAACCTATCTTGCAGGAGTATAACAGTGCGGTGGTGAATATTGCTGAGAATGCAAATGGGATGTACACTCTTTATGAACCAAGCTACATGAATGTGAGTCTGGAGTTTGTTCTGTCATTTGCCTTTGTTAAGACCCCGGATTCTACTCGAGGACCACTTCTAAATGCAATTGAAATAAGTAAATATGTGCCGATTGCTGCAAAGACGGATAGGCAAGATTTGGCTGTTCTCAATATCCTTCGTCTCATGTCCTCCGAGAGTCTGTCACTAGATGAAGGTGATCCGTGTGTCCCGACTCCCTGGGAATGGGTGAATTGTAGTTCTACATCACCATCGAGAATTACAAAAATTGACCTATCAGGGAAAAATATGAAGGGTGAGATTCCATTGGAGCTTAATAACATGCAGGAGTTGACAGAGTTGTGGTTGGATGGTAACTCCTTCAGTGGACCGTTTCCTGACATCAGTAATCTTATCAATATAAGGATTCTGCATCTAGAGAATAACAAGTTGACTGGTGCACTACCTTCTTACCTGGATAGCTTGTCAAATTTGCAAGAACTGTACATACAAAACAATTCTTTCAGTGGGGAAATTCCTGCAGGACTGTTAACGGGGAAAGTCACTTTTGAATATAAAGATAATCCCGGGTTACACAAGGGAGCACAAAAGCAGAAGCATTTTAAGTTGATAATTGGAATTTCAGTTGGAGTACTAGTGGTTGTAACCATTTTAATCTTGGGGGGTCTAATGCTATTACGTAGTCTTCGAGAAAAGTCACGTCATCAGAAAGGTTTGTACTCCAAGAATCTGTTGTACTACTATCACAGTTTCTGCAATCCAACATCTTTTCTTGTGCATCAGGTGATTCTCTGCGCGCCAGCACCAAGCCTTCAACAGCCTATTCAGTTTCCCGGGGGCATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_1 LRR_4 LRR_8 Malectin_like Pkinase_Tyr

Protein Analysis

608

Amino Acids

68.17

Weight (kDa)

5.62

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 28 - 361 1.9e-82 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0034470)

Species Orthologous Gene IDs
rosa_samantha Rh4CG333200 Rh4DG312800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 170
Acc65I GGTACC 1 cut(s) 609
AccB1I GGYRCC 2 cut(s) 609, 869
AccB7I CCANNNNNTGG 1 cut(s) 122
AccI GTMKAC 1 cut(s) 374
AccII CGCG 2 cut(s) 767, 1778
AciI CCGC 6 cut(s) 217, 431, 765, 767, 851, 929
AclI AACGTT 1 cut(s) 299
AclWI GGATC 2 cut(s) 614, 1175
AcsI RAATTY 7 cut(s) 341, 439, 577, 887, 1450, 1494, 1599
AcuI CTGAAG 1 cut(s) 1327
AcyI GRCGYC 2 cut(s) 167, 434
AfiI CCNNNNNNNGG 4 cut(s) 122, 630, 637, 1206
AflII CTTAAG 1 cut(s) 259
AgsI TTSAA 9 cut(s) 68, 99, 305, 514, 559, 805, 1073, 1532, 1796
AhlI ACTAGT 1 cut(s) 1615
AjiI CACGTC 1 cut(s) 1682
AjnI CCWGG 3 cut(s) 685, 1199, 1434
AjuI GAANNNNNNNTTGG 2 cut(s) 878, 910
AluBI AGCT 6 cut(s) 349, 795, 836, 984, 1294, 1443
AluI AGCT 6 cut(s) 349, 795, 836, 984, 1294, 1443
Alw21I GWGCWC 5 cut(s) 351, 589, 596, 1423, 1567
Alw26I GTCTC 4 cut(s) 49, 216, 323, 1148
Alw44I GTGCAC 1 cut(s) 1419
AlwI GGATC 2 cut(s) 614, 1175
AlwNI CAGNNNCTG 1 cut(s) 1734
Ama87I CYCGRG 4 cut(s) 397, 1047, 1547, 1814
AoxI GGCC 2 cut(s) 393, 506
ApaLI GTGCAC 1 cut(s) 1419
ApeKI GCWGC 3 cut(s) 312, 566, 1097
ApoI RAATTY 7 cut(s) 341, 439, 577, 887, 1450, 1494, 1599
Asp718I GGTACC 1 cut(s) 609
AspLEI GCGC 2 cut(s) 1778, 1780
AspS9I GGNCC 2 cut(s) 1052, 1349
AsuC2I CCSGG 5 cut(s) 1037, 1548, 1549, 1815, 1816
AsuHPI GGTGA 8 cut(s) 586, 766, 946, 1190, 1221, 1222, 1289, 1777
AvaI CYCGRG 4 cut(s) 397, 1047, 1547, 1814
AvaII GGWCC 2 cut(s) 1052, 1349
BaeGI GKGCMC 1 cut(s) 1423
BanI GGYRCC 2 cut(s) 609, 869
BanII GRGCYC 1 cut(s) 351
BbsI GAAGAC 1 cut(s) 1658
Bbv12I GWGCWC 5 cut(s) 351, 589, 596, 1423, 1567
BbvI GCAGC 3 cut(s) 324, 553, 1084
BccI CCATC 3 cut(s) 806, 1240, 1325
BciT130I CCWGG 3 cut(s) 687, 1201, 1436
BclI TGATCA 1 cut(s) 420
BcnI CCSGG 5 cut(s) 1037, 1548, 1549, 1815, 1816
BcoDI GTCTC 4 cut(s) 49, 216, 323, 1148
BcuI ACTAGT 1 cut(s) 1615
BfaI CTAG 9 cut(s) 41, 287, 570, 711, 809, 831, 1169, 1397, 1616
BfmI CTRYAG 2 cut(s) 796, 1500
BfrI CTTAAG 1 cut(s) 259
BisI GCNGC 4 cut(s) 313, 432, 567, 1098
BlsI GCNGC 4 cut(s) 314, 433, 568, 1099
BmcAI AGTACT 3 cut(s) 121, 248, 1614
Bme1390I CCNGG 8 cut(s) 687, 1037, 1201, 1436, 1548, 1549, 1815, 1816
Bme18I GGWCC 2 cut(s) 1052, 1349
BmeT110I CYCGRG 4 cut(s) 397, 1047, 1547, 1814
BmgBI CACGTC 1 cut(s) 1682
BmgT120I GGNCC 2 cut(s) 1052, 1349
BmiI GGNNCC 3 cut(s) 611, 684, 871
BmrFI CCNGG 8 cut(s) 687, 1037, 1201, 1436, 1548, 1549, 1815, 1816
BmsI GCATC 5 cut(s) 349, 589, 747, 1402, 1768
BoxI GACNNNNGTC 2 cut(s) 147, 170
BpiI GAAGAC 1 cut(s) 1658
BpmI CTGGAG 1 cut(s) 1022
BpuMI CCSGG 5 cut(s) 1037, 1548, 1549, 1815, 1816
BsaAI YACGTR 1 cut(s) 1661
BsaBI GATNNNNATC 1 cut(s) 645
BsaHI GRCGYC 2 cut(s) 167, 434
BsaJI CCNNGG 7 cut(s) 765, 1035, 1199, 1200, 1547, 1814, 1815
BsaWI WCCGGW 1 cut(s) 630
BsaXI ACNNNNNCTCC 4 cut(s) 29, 59, 1602, 1632
Bsc4I CCNNNNNNNGG 4 cut(s) 122, 630, 637, 1206
Bse1I ACTGG 3 cut(s) 108, 127, 1420
Bse8I GATNNNNATC 1 cut(s) 645
BseBI CCWGG 3 cut(s) 687, 1201, 1436
BseDI CCNNGG 7 cut(s) 765, 1035, 1199, 1200, 1547, 1814, 1815
BseGI GGATG 5 cut(s) 364, 550, 604, 966, 1336
BseJI GATNNNNATC 1 cut(s) 645
BseLI CCNNNNNNNGG 4 cut(s) 122, 630, 637, 1206
BseMII CTCAG 2 cut(s) 782, 936
BseNI ACTGG 3 cut(s) 108, 127, 1420
BsePI GCGCGC 1 cut(s) 1776
BseRI GAGGAG 3 cut(s) 37, 289, 341
BseSI GKGCMC 1 cut(s) 1423
BseXI GCAGC 3 cut(s) 324, 553, 1084
BseYI CCCAGC 1 cut(s) 820
Bsh1236I CGCG 2 cut(s) 767, 1778
BshFI GGCC 2 cut(s) 395, 508
BshNI GGYRCC 2 cut(s) 609, 869
BsiHKAI GWGCWC 5 cut(s) 351, 589, 596, 1423, 1567
BsiHKCI CYCGRG 4 cut(s) 397, 1047, 1547, 1814
BsiSI CCGG 4 cut(s) 631, 1037, 1548, 1815
BslFI GGGAC 4 cut(s) 43, 158, 178, 1175
BslI CCNNNNNNNGG 4 cut(s) 122, 630, 637, 1206
BsmAI GTCTC 4 cut(s) 49, 216, 323, 1148
BsmBI CGTCTC 1 cut(s) 1148
BsmFI GGGAC 4 cut(s) 43, 158, 178, 1175
BsmI GAATGC 1 cut(s) 955
BsnI GGCC 2 cut(s) 395, 508
BsoBI CYCGRG 4 cut(s) 397, 1047, 1547, 1814
Bsp1286I GDGCHC 5 cut(s) 351, 589, 596, 1423, 1567
Bsp1407I TGTACA 2 cut(s) 963, 1464
Bsp143I GATC 4 cut(s) 420, 619, 646, 1180
BspACI CCGC 6 cut(s) 217, 431, 765, 767, 851, 929
BspANI GGCC 2 cut(s) 395, 508
BspCNI CTCAG 2 cut(s) 783, 937
BspFNI CGCG 2 cut(s) 767, 1778
BspLI GGNNCC 3 cut(s) 611, 684, 871
BspMAI CTGCAG 1 cut(s) 1504
BspPI GGATC 2 cut(s) 614, 1175
BspT107I GGYRCC 2 cut(s) 609, 869
BspTI CTTAAG 1 cut(s) 259
BsrGI TGTACA 2 cut(s) 963, 1464
BsrI ACTGG 3 cut(s) 108, 127, 1420
BssECI CCNNGG 7 cut(s) 765, 1035, 1199, 1200, 1547, 1814, 1815
BssHII GCGCGC 1 cut(s) 1776
BssMI GATC 4 cut(s) 420, 619, 646, 1180
BssNI GRCGYC 2 cut(s) 167, 434
Bst2UI CCWGG 3 cut(s) 687, 1201, 1436
Bst4CI ACNGT 7 cut(s) 207, 379, 926, 1353, 1464, 1509, 1730
BstACI GRCGYC 2 cut(s) 167, 434
BstAFI CTTAAG 1 cut(s) 259
BstAUI TGTACA 2 cut(s) 963, 1464
BstBAI YACGTR 1 cut(s) 1661
BstC8I GCNNGC 2 cut(s) 1778, 1782
BstDEI CTNAG 2 cut(s) 791, 945
BstDSI CCRYGG 1 cut(s) 765
BstF5I GGATG 5 cut(s) 364, 550, 604, 966, 1336
BstFNI CGCG 2 cut(s) 767, 1778
BstHHI GCGC 2 cut(s) 1778, 1780
BstKTI GATC 4 cut(s) 423, 622, 649, 1183
BstMAI GTCTC 4 cut(s) 49, 216, 323, 1148
BstMBI GATC 4 cut(s) 420, 619, 646, 1180
BstMWI GCNNNNNNNGC 2 cut(s) 321, 950
BstNI CCWGG 3 cut(s) 687, 1201, 1436
BstNSI RCATGY 2 cut(s) 460, 1306
BstPAI GACNNNNGTC 2 cut(s) 147, 170
BstSCI CCNGG 8 cut(s) 685, 1035, 1199, 1434, 1546, 1547, 1813, 1814
BstSFI CTRYAG 2 cut(s) 796, 1500
BstSLI GKGCMC 1 cut(s) 1423
BstSNI TACGTA 1 cut(s) 1661
BstUI CGCG 2 cut(s) 767, 1778
BstV1I GCAGC 3 cut(s) 324, 553, 1084
BstV2I GAAGAC 1 cut(s) 1658
BsuRI GGCC 2 cut(s) 395, 508
BtgI CCRYGG 1 cut(s) 765
BtrI CACGTC 1 cut(s) 1682
BtsCI GGATG 5 cut(s) 364, 550, 604, 966, 1336
BtsIMutI CAGTG 6 cut(s) 115, 531, 788, 931, 1351, 1492
Cac8I GCNNGC 2 cut(s) 1778, 1782
CaiI CAGNNNCTG 1 cut(s) 1734
CfoI GCGC 2 cut(s) 1778, 1780
Cfr13I GGNCC 2 cut(s) 1052, 1349
Cfr42I CCGCGG 1 cut(s) 768
Cfr9I CCCGGG 2 cut(s) 1547, 1814
CseI GACGC 1 cut(s) 423
CspCI CAANNNNNGTGG 2 cut(s) 520, 555
CviAII CATG 8 cut(s) 22, 28, 132, 145, 457, 988, 1147, 1303
DdeI CTNAG 2 cut(s) 791, 945
DpnI GATC 4 cut(s) 422, 621, 648, 1182
DpnII GATC 4 cut(s) 420, 619, 646, 1180
Ecl136II GAGCTC 1 cut(s) 349
Eco105I TACGTA 1 cut(s) 1661
Eco147I AGGCCT 2 cut(s) 395, 508
Eco24I GRGCYC 1 cut(s) 351
Eco47I GGWCC 2 cut(s) 1052, 1349
Eco53kI GAGCTC 1 cut(s) 349
Eco57I CTGAAG 1 cut(s) 1327
Eco88I CYCGRG 4 cut(s) 397, 1047, 1547, 1814
EcoICRI GAGCTC 1 cut(s) 349
EcoRI GAATTC 1 cut(s) 439
EcoRII CCWGG 3 cut(s) 685, 1199, 1434
EcoT38I GRGCYC 1 cut(s) 351
Esp3I CGTCTC 1 cut(s) 1148
FaeI CATG 8 cut(s) 25, 31, 135, 148, 460, 991, 1150, 1306
FaqI GGGAC 4 cut(s) 43, 158, 178, 1175
FatI CATG 8 cut(s) 21, 27, 131, 144, 456, 987, 1146, 1302
FauI CCCGC 1 cut(s) 224
FauNDI CATATG 1 cut(s) 406
FbaI TGATCA 1 cut(s) 420
FblI GTMKAC 1 cut(s) 374
Fnu4HI GCNGC 4 cut(s) 313, 432, 567, 1098
FokI GGATG 5 cut(s) 371, 557, 611, 973, 1343
FriOI GRGCYC 1 cut(s) 351
Fsp4HI GCNGC 4 cut(s) 313, 432, 567, 1098
FspBI CTAG 9 cut(s) 41, 287, 570, 711, 809, 831, 1169, 1397, 1616
GlaI GCGC 2 cut(s) 1777, 1779
GluI GCNGC 4 cut(s) 313, 432, 567, 1098
GsaI CCCAGC 1 cut(s) 824
GsuI CTGGAG 1 cut(s) 1022
HaeIII GGCC 2 cut(s) 395, 508
HapII CCGG 4 cut(s) 631, 1037, 1548, 1815
HgaI GACGC 1 cut(s) 423
HhaI GCGC 2 cut(s) 1778, 1780
Hin1I GRCGYC 2 cut(s) 167, 434
Hin1II CATG 8 cut(s) 25, 31, 135, 148, 460, 991, 1150, 1306
Hin6I GCGC 2 cut(s) 1776, 1778
HinP1I GCGC 2 cut(s) 1776, 1778
HincII GTYRAC 3 cut(s) 1314, 1413, 1512
HindII GTYRAC 3 cut(s) 1314, 1413, 1512
HpaI GTTAAC 1 cut(s) 1512
HpaII CCGG 4 cut(s) 631, 1037, 1548, 1815
HphI GGTGA 8 cut(s) 586, 766, 946, 1190, 1221, 1222, 1289, 1777
Hpy166II GTNNAC 7 cut(s) 375, 966, 1314, 1349, 1413, 1421, 1512
Hpy188I TCNGA 6 cut(s) 142, 591, 646, 893, 1156, 1689
Hpy8I GTNNAC 7 cut(s) 375, 966, 1314, 1349, 1413, 1421, 1512
Hpy99I CGWCG 1 cut(s) 439
HpyAV CCTTC 8 cut(s) 273, 745, 1148, 1169, 1267, 1351, 1437, 1802
HpyCH4III ACNGT 7 cut(s) 207, 379, 926, 1353, 1464, 1509, 1730
HpyCH4IV ACGT 4 cut(s) 167, 299, 1660, 1681
HpyF10VI GCNNNNNNNGC 2 cut(s) 321, 950
HpyF3I CTNAG 2 cut(s) 791, 945
HpySE526I ACGT 4 cut(s) 167, 299, 1660, 1681
Hsp92I GRCGYC 2 cut(s) 167, 434
Hsp92II CATG 8 cut(s) 25, 31, 135, 148, 460, 991, 1150, 1306
HspAI GCGC 2 cut(s) 1776, 1778
KpnI GGTACC 1 cut(s) 613
Ksp22I TGATCA 1 cut(s) 420
KspAI GTTAAC 1 cut(s) 1512
KspI CCGCGG 1 cut(s) 768
Kzo9I GATC 4 cut(s) 420, 619, 646, 1180
LmnI GCTCC 6 cut(s) 592, 688, 729, 898, 1291, 1562
Lsp1109I GCAGC 3 cut(s) 324, 553, 1084
LweI GCATC 5 cut(s) 349, 589, 747, 1402, 1768
MaeI CTAG 9 cut(s) 41, 287, 570, 711, 809, 831, 1169, 1397, 1616
MaeII ACGT 4 cut(s) 167, 299, 1660, 1681
MaeIII GTNAC 8 cut(s) 110, 379, 1164, 1334, 1522, 1551, 1624, 1677
MalI GATC 4 cut(s) 422, 621, 648, 1182
MboI GATC 4 cut(s) 420, 619, 646, 1180
MboII GAAGA 2 cut(s) 544, 1658
MfeI CAATTG 1 cut(s) 1068
MhlI GDGCHC 5 cut(s) 351, 589, 596, 1423, 1567
MlyI GAGTC 4 cut(s) 65, 1006, 1168, 1189
MmeI TCCRAC 3 cut(s) 1308, 1588, 1766
MseI TTAA 6 cut(s) 260, 1029, 1296, 1511, 1584, 1634
MslI CAYNNNNRTG 3 cut(s) 26, 521, 992
MspA1I CMGCKG 1 cut(s) 767
MspCI CTTAAG 1 cut(s) 259
MspI CCGG 4 cut(s) 631, 1037, 1548, 1815
MspR9I CCNGG 8 cut(s) 687, 1037, 1201, 1436, 1548, 1549, 1815, 1816
MunI CAATTG 1 cut(s) 1068
Mva1269I GAATGC 1 cut(s) 955
MvaI CCWGG 3 cut(s) 687, 1201, 1436
MvnI CGCG 2 cut(s) 767, 1778
MwoI GCNNNNNNNGC 2 cut(s) 321, 950
NciI CCSGG 5 cut(s) 1037, 1548, 1549, 1815, 1816
NdeI CATATG 1 cut(s) 406
NdeII GATC 4 cut(s) 420, 619, 646, 1180
NlaIII CATG 8 cut(s) 25, 31, 135, 148, 460, 991, 1150, 1306
NlaIV GGNNCC 3 cut(s) 611, 684, 871
NmuCI GTSAC 4 cut(s) 110, 1164, 1522, 1677
NspI RCATGY 2 cut(s) 460, 1306
PaeR7I CTCGAG 2 cut(s) 397, 1047
PasI CCCWGGG 1 cut(s) 1200
PauI GCGCGC 1 cut(s) 1776
PceI AGGCCT 2 cut(s) 395, 508
PcsI WCGNNNNNNNCGW 1 cut(s) 1666
PctI GAATGC 1 cut(s) 955
PfeI GAWTC 8 cut(s) 641, 699, 805, 1040, 1282, 1387, 1708, 1768
PflMI CCANNNNNTGG 1 cut(s) 122
PkrI GCNGC 4 cut(s) 314, 433, 568, 1099
PleI GAGTC 4 cut(s) 64, 1005, 1167, 1189
PpsI GAGTC 4 cut(s) 64, 1005, 1167, 1189
Ppu21I YACGTR 1 cut(s) 1661
PshAI GACNNNNGTC 2 cut(s) 147, 170
Psp124BI GAGCTC 1 cut(s) 351
Psp1406I AACGTT 1 cut(s) 299
Psp6I CCWGG 3 cut(s) 685, 1199, 1434
PspFI CCCAGC 1 cut(s) 820
PspGI CCWGG 3 cut(s) 685, 1199, 1434
PspN4I GGNNCC 3 cut(s) 611, 684, 871
PspPI GGNCC 2 cut(s) 1052, 1349
PspXI VCTCGAGB 1 cut(s) 1047
PsrI GAACNNNNNNTAC 2 cut(s) 1452, 1484
PstI CTGCAG 1 cut(s) 1504
PstNI CAGNNNCTG 1 cut(s) 1734
PteI GCGCGC 1 cut(s) 1776
RseI CAYNNNNRTG 3 cut(s) 26, 521, 992
SacI GAGCTC 1 cut(s) 351
SacII CCGCGG 1 cut(s) 768
SaqAI TTAA 6 cut(s) 260, 1029, 1296, 1511, 1584, 1634
SatI GCNGC 4 cut(s) 313, 432, 567, 1098
Sau3AI GATC 4 cut(s) 420, 619, 646, 1180
Sau96I GGNCC 2 cut(s) 1052, 1349
SbfI CCTGCAGG 1 cut(s) 1504
ScaI AGTACT 3 cut(s) 121, 248, 1614
SchI GAGTC 4 cut(s) 65, 1006, 1168, 1189
ScrFI CCNGG 8 cut(s) 687, 1037, 1201, 1436, 1548, 1549, 1815, 1816
SdaI CCTGCAGG 1 cut(s) 1504
SduI GDGCHC 5 cut(s) 351, 589, 596, 1423, 1567
SfaNI GCATC 5 cut(s) 349, 589, 747, 1402, 1768
SfcI CTRYAG 2 cut(s) 796, 1500
Sfr274I CTCGAG 2 cut(s) 397, 1047
Sfr303I CCGCGG 1 cut(s) 768
SgrBI CCGCGG 1 cut(s) 768
SinI GGWCC 2 cut(s) 1052, 1349
SlaI CTCGAG 2 cut(s) 397, 1047
SmaI CCCGGG 2 cut(s) 1549, 1816
SmiMI CAYNNNNRTG 3 cut(s) 26, 521, 992
SmlI CTYRAG 3 cut(s) 259, 397, 1047
SmoI CTYRAG 3 cut(s) 259, 397, 1047
SnaBI TACGTA 1 cut(s) 1661
SpeI ACTAGT 1 cut(s) 1615
Sse8387I CCTGCAGG 1 cut(s) 1504
SseBI AGGCCT 2 cut(s) 395, 508
SsiI CCGC 6 cut(s) 217, 431, 765, 767, 851, 929
SspI AATATT 1 cut(s) 940
SspMI CTAG 9 cut(s) 41, 287, 570, 711, 809, 831, 1169, 1397, 1616
SstI GAGCTC 1 cut(s) 351
StuI AGGCCT 2 cut(s) 395, 508
StyD4I CCNGG 8 cut(s) 685, 1035, 1199, 1434, 1546, 1547, 1813, 1814
TaaI ACNGT 7 cut(s) 207, 379, 926, 1353, 1464, 1509, 1730
TaiI ACGT 4 cut(s) 170, 302, 1663, 1684
TaqI TCGA 7 cut(s) 345, 390, 398, 437, 1048, 1235, 1669
TatI WGTACW 7 cut(s) 119, 246, 963, 1464, 1612, 1698, 1716
TauI GCSGC 1 cut(s) 434
TfiI GAWTC 8 cut(s) 641, 699, 805, 1040, 1282, 1387, 1708, 1768
Tru1I TTAA 6 cut(s) 260, 1029, 1296, 1511, 1584, 1634
Tru9I TTAA 6 cut(s) 260, 1029, 1296, 1511, 1584, 1634
TscAI CASTG 6 cut(s) 115, 538, 795, 931, 1351, 1492
TseFI GTSAC 4 cut(s) 110, 1164, 1522, 1677
TseI GCWGC 3 cut(s) 312, 566, 1097
Tsp45I GTSAC 4 cut(s) 110, 1164, 1522, 1677
TspGWI ACGGA 3 cut(s) 611, 1121, 1173
TspMI CCCGGG 2 cut(s) 1547, 1814
TspRI CASTG 6 cut(s) 115, 538, 795, 931, 1351, 1492
Van91I CCANNNNNTGG 1 cut(s) 122
Vha464I CTTAAG 1 cut(s) 259
VneI GTGCAC 1 cut(s) 1419
VpaK11BI GGWCC 2 cut(s) 1052, 1349
XapI RAATTY 7 cut(s) 341, 439, 577, 887, 1450, 1494, 1599
XbaI TCTAGA 2 cut(s) 808, 1396
XceI RCATGY 2 cut(s) 460, 1306
XcmI CCANNNNNNNNNTGG 1 cut(s) 1636
XhoI CTCGAG 2 cut(s) 397, 1047
XmaI CCCGGG 2 cut(s) 1547, 1814
XmiI GTMKAC 1 cut(s) 374
XspI CTAG 9 cut(s) 41, 287, 570, 711, 809, 831, 1169, 1397, 1616
ZraI GACGTC 1 cut(s) 168
ZrmI AGTACT 3 cut(s) 121, 248, 1614
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.