Chloroplast stem-loop binding protein of 41 kDa b
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000588.1_g000022 |
| rosa_samantha | Rh5AG465200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 229 |
| AciI | CCGC | 2 cut(s) | 138, 151 |
| AcyI | GRCGYC | 1 cut(s) | 148 |
| AluBI | AGCT | 1 cut(s) | 190 |
| AluI | AGCT | 1 cut(s) | 190 |
| Alw26I | GTCTC | 1 cut(s) | 6 |
| Ama87I | CYCGRG | 1 cut(s) | 44 |
| Aor13HI | TCCGGA | 1 cut(s) | 229 |
| AoxI | GGCC | 1 cut(s) | 99 |
| ApeKI | GCWGC | 2 cut(s) | 187, 218 |
| AspS9I | GGNCC | 1 cut(s) | 100 |
| AvaI | CYCGRG | 1 cut(s) | 44 |
| AxyI | CCTNAGG | 1 cut(s) | 258 |
| BbsI | GAAGAC | 1 cut(s) | 177 |
| BbvCI | CCTCAGC | 1 cut(s) | 81 |
| BbvI | GCAGC | 2 cut(s) | 199, 205 |
| BccI | CCATC | 2 cut(s) | 203, 215 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 6, 40 |
| BcoDI | GTCTC | 1 cut(s) | 6 |
| BisI | GCNGC | 4 cut(s) | 138, 151, 188, 219 |
| BlsI | GCNGC | 4 cut(s) | 139, 152, 189, 220 |
| BmeT110I | CYCGRG | 1 cut(s) | 44 |
| BmgT120I | GGNCC | 1 cut(s) | 100 |
| BmiI | GGNNCC | 2 cut(s) | 102, 234 |
| BpiI | GAAGAC | 1 cut(s) | 177 |
| BpmI | CTGGAG | 1 cut(s) | 50 |
| Bpu10I | CCTNAGC | 1 cut(s) | 81 |
| BsaHI | GRCGYC | 1 cut(s) | 148 |
| BsaWI | WCCGGW | 2 cut(s) | 143, 229 |
| Bse21I | CCTNAGG | 1 cut(s) | 258 |
| BseAI | TCCGGA | 1 cut(s) | 229 |
| BseMII | CTCAG | 5 cut(s) | 87, 95, 136, 179, 228 |
| BseXI | GCAGC | 2 cut(s) | 199, 205 |
| BshFI | GGCC | 1 cut(s) | 101 |
| BsiHKCI | CYCGRG | 1 cut(s) | 44 |
| BsiSI | CCGG | 2 cut(s) | 144, 230 |
| BsmAI | GTCTC | 1 cut(s) | 6 |
| BsmBI | CGTCTC | 1 cut(s) | 6 |
| BsnI | GGCC | 1 cut(s) | 101 |
| BsoBI | CYCGRG | 1 cut(s) | 44 |
| Bsp13I | TCCGGA | 1 cut(s) | 229 |
| BspACI | CCGC | 2 cut(s) | 138, 151 |
| BspANI | GGCC | 1 cut(s) | 101 |
| BspCNI | CTCAG | 5 cut(s) | 86, 94, 135, 178, 229 |
| BspEI | TCCGGA | 1 cut(s) | 229 |
| BspLI | GGNNCC | 2 cut(s) | 102, 234 |
| BssNI | GRCGYC | 1 cut(s) | 148 |
| BstACI | GRCGYC | 1 cut(s) | 148 |
| BstDEI | CTNAG | 6 cut(s) | 73, 81, 122, 165, 237, 258 |
| BstMAI | GTCTC | 1 cut(s) | 6 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 34 |
| BstV1I | GCAGC | 2 cut(s) | 199, 205 |
| BstV2I | GAAGAC | 1 cut(s) | 177 |
| Bsu36I | CCTNAGG | 1 cut(s) | 258 |
| BsuRI | GGCC | 1 cut(s) | 101 |
| Cfr13I | GGNCC | 1 cut(s) | 100 |
| CseI | GACGC | 2 cut(s) | 23, 156 |
| CviJI | RGCY | 5 cut(s) | 85, 101, 190, 218, 235 |
| CviKI_1 | RGCY | 5 cut(s) | 85, 101, 190, 218, 235 |
| DdeI | CTNAG | 6 cut(s) | 73, 81, 122, 165, 237, 258 |
| Eco81I | CCTNAGG | 1 cut(s) | 258 |
| Eco88I | CYCGRG | 1 cut(s) | 44 |
| Esp3I | CGTCTC | 1 cut(s) | 6 |
| FaiI | YATR | 1 cut(s) | 252 |
| Fnu4HI | GCNGC | 4 cut(s) | 138, 151, 188, 219 |
| Fsp4HI | GCNGC | 4 cut(s) | 138, 151, 188, 219 |
| GluI | GCNGC | 4 cut(s) | 138, 151, 188, 219 |
| GsuI | CTGGAG | 1 cut(s) | 50 |
| HaeIII | GGCC | 1 cut(s) | 101 |
| HapII | CCGG | 2 cut(s) | 144, 230 |
| HgaI | GACGC | 2 cut(s) | 23, 156 |
| Hin1I | GRCGYC | 1 cut(s) | 148 |
| HinfI | GANTC | 4 cut(s) | 32, 47, 52, 129 |
| HpaII | CCGG | 2 cut(s) | 144, 230 |
| Hpy166II | GTNNAC | 1 cut(s) | 247 |
| Hpy188III | TCNNGA | 4 cut(s) | 159, 167, 230, 299 |
| Hpy8I | GTNNAC | 1 cut(s) | 247 |
| HpyAV | CCTTC | 1 cut(s) | 277 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 34 |
| HpyF3I | CTNAG | 6 cut(s) | 73, 81, 122, 165, 237, 258 |
| Hsp92I | GRCGYC | 1 cut(s) | 148 |
| Kpn2I | TCCGGA | 1 cut(s) | 229 |
| LmnI | GCTCC | 1 cut(s) | 232 |
| LpnPI | CCDG | 9 cut(s) | 14, 52, 144, 152, 157, 160, 207, 243, 249 |
| Lsp1109I | GCAGC | 2 cut(s) | 199, 205 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MboII | GAAGA | 3 cut(s) | 182, 289, 292 |
| MlyI | GAGTC | 2 cut(s) | 41, 56 |
| MnlI | CCTC | 8 cut(s) | 34, 53, 66, 74, 82, 90, 124, 143 |
| MroI | TCCGGA | 1 cut(s) | 229 |
| MspI | CCGG | 2 cut(s) | 144, 230 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 34 |
| NlaIV | GGNNCC | 2 cut(s) | 102, 234 |
| NmeAIII | GCCGAG | 1 cut(s) | 77 |
| NmuCI | GTSAC | 1 cut(s) | 299 |
| PaeR7I | CTCGAG | 1 cut(s) | 44 |
| PfeI | GAWTC | 2 cut(s) | 52, 129 |
| PflFI | GACNNNGTC | 1 cut(s) | 305 |
| PkrI | GCNGC | 4 cut(s) | 139, 152, 189, 220 |
| PleI | GAGTC | 2 cut(s) | 40, 55 |
| PpsI | GAGTC | 2 cut(s) | 40, 55 |
| PspN4I | GGNNCC | 2 cut(s) | 102, 234 |
| PspPI | GGNCC | 1 cut(s) | 100 |
| PspXI | VCTCGAGB | 1 cut(s) | 44 |
| PsyI | GACNNNGTC | 1 cut(s) | 305 |
| SatI | GCNGC | 4 cut(s) | 138, 151, 188, 219 |
| Sau96I | GGNCC | 1 cut(s) | 100 |
| SchI | GAGTC | 2 cut(s) | 41, 56 |
| SetI | ASST | 2 cut(s) | 26, 192 |
| Sfr274I | CTCGAG | 1 cut(s) | 44 |
| SlaI | CTCGAG | 1 cut(s) | 44 |
| SmlI | CTYRAG | 1 cut(s) | 44 |
| SmoI | CTYRAG | 1 cut(s) | 44 |
| SsiI | CCGC | 2 cut(s) | 138, 151 |
| TaqI | TCGA | 3 cut(s) | 45, 50, 127 |
| TauI | GCSGC | 2 cut(s) | 140, 153 |
| TfiI | GAWTC | 2 cut(s) | 52, 129 |
| TseFI | GTSAC | 1 cut(s) | 299 |
| TseI | GCWGC | 2 cut(s) | 187, 218 |
| Tsp45I | GTSAC | 1 cut(s) | 299 |
| Tth111I | GACNNNGTC | 1 cut(s) | 305 |
| XhoI | CTCGAG | 1 cut(s) | 44 |