Rh5BG394500

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Reverse (-)
63476029 .. 63489368
13340 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG394500.1

Sequence Viewer

Length: 1086 bp
ATGAGCGTCAACAACAGGGAGCATCGGACAAGCTTCGTCGACCGAGCTTTCCTCAGACAAGATTCGTCCGCCGAGCTCTCCTCGGACAAGCTTCGTCCTCCGAGCTTTCCTCGGTCAAGCTTCGTCCGCCAAGTTTTCCTCGGCCAAGCTTCGTCCGCCAAGCTTTCCTCGGTCAAGCTTCGTCCGCCAAGCTTTCCTCGGCCAAGCTTTGTCCACCAAGCTTCATCCGCCAAGCTTTCCTCGGCCAAGCTTTGTCCTCCAAGCTTCGTCCGCCAAGCTTTCCTCAGTCAAGCTTTCCTCGGTCAAGCTTTCATCTGTCAAGCTTCATCCGCCAAGCTTTGTTCAGTCAAGTTTCGTCCTCCAAGCTTTGCTCGGCCAAGCTTCGTCCGCCAAGTTTTCCTCGGCCAAGCTTCGTCCGCCAAGCTTTCCTCGGCCAAGCTTCGTCCGCTAAGCTTTCCTCGATCAAGCTTCGTCCGCCAAACTTTCCTCGGCCAAGCTTCGTTCGCCAAGCTTTCCTCAACCAAGCTTCGTCCGCCAAGCTGTCCTCTGCTAAGCTTCATCCGCCAAGCTTTCCTCAGTCAAGCTTCGTCCGCCAAGCTTTCCTCGGCCAAGCTTTCGTCCGTCAAGCTTCGTCCGCCAAGCCTTTGTCCCCCAATCTTTCCTCGGCCAAGCTTCATCCGCCAAGCTTTCCTCCGTCAAGCTTCGTTCGCCAAGCTTGGTCCGCCAAGCTTTCCTCGGTCAAGCTTTGTCCGCCAAGCTTTCCTCGGTCAAGCTTGGTCCGCCAAGCTTTCCTCGGTCAAGCTTCGTCCGCCAAGCTTTCCTCAGCCAAGCTTTGTCCGTCAAGCTTTGAGCAATCTAGAGTCAGAATTCTTCATAGAATATGGAAAGGCAAGAAGGTACAAAGTTCAGGAGGGCATTGCGAAAGGAAGTTATGGTGTTGAGGGTTCTGCGGTTGACACCCACATAGGACAAAAATTTGCGATCAAGAAGATTAATGATGTTTTTGAGCATGTCTCAGATGCTACAAGGATCCTGAGAGAAATCAGCTTCTTCATTTGCTTTGTCATCCTAATATTGTTGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

361

Amino Acids

39.99

Weight (kDa)

11.4

Isoelectric Point (pI)

57.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0033509)

Species Orthologous Gene IDs
rosa_samantha Rh5BG394500 Rh5CG418300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 39
AclWI GGATC 2 cut(s) 1024, 1037
AcoI YGGCCR 9 cut(s) 142, 200, 243, 374, 403, 432, 490, 606, 665
AcsI RAATTY 2 cut(s) 866, 974
AfaI GTAC 1 cut(s) 899
AgsI TTSAA 1 cut(s) 1081
Alw21I GWGCWC 1 cut(s) 78
Alw26I GTCTC 1 cut(s) 1018
AlwI GGATC 2 cut(s) 1024, 1037
AoxI GGCC 9 cut(s) 142, 200, 243, 374, 403, 432, 490, 606, 665
ApoI RAATTY 2 cut(s) 866, 974
AseI ATTAAT 1 cut(s) 993
AspS9I GGNCC 2 cut(s) 719, 777
AvaII GGWCC 2 cut(s) 719, 777
BamHI GGATCC 1 cut(s) 1029
BanII GRGCYC 1 cut(s) 78
Bbv12I GWGCWC 1 cut(s) 78
BbvCI CCTCAGC 1 cut(s) 822
BcoDI GTCTC 1 cut(s) 1018
BfaI CTAG 1 cut(s) 857
BlpI GCTNAGC 2 cut(s) 449, 551
Bme18I GGWCC 2 cut(s) 719, 777
BmgT120I GGNCC 2 cut(s) 719, 777
BmiI GGNNCC 1 cut(s) 1031
BmsI GCATC 2 cut(s) 31, 1009
BplI GAGNNNNNCTC 8 cut(s) 36, 68, 65, 97, 94, 126, 998, 1030
Bpu10I CCTNAGC 1 cut(s) 822
Bpu1102I GCTNAGC 2 cut(s) 449, 551
Bse3DI GCAATG 1 cut(s) 915
BseGI GGATG 5 cut(s) 224, 326, 558, 675, 1065
BseMI GCAATG 1 cut(s) 915
BseMII CTCAG 6 cut(s) 67, 298, 589, 836, 1025, 1029
BseRI GAGGAG 1 cut(s) 70
Bsh1285I CGRYCG 1 cut(s) 43
BshFI GGCC 9 cut(s) 144, 202, 245, 376, 405, 434, 492, 608, 667
BsiEI CGRYCG 1 cut(s) 43
BsiHKAI GWGCWC 1 cut(s) 78
BslFI GGGAC 1 cut(s) 633
BsmAI GTCTC 1 cut(s) 1018
BsmFI GGGAC 1 cut(s) 633
BsnI GGCC 9 cut(s) 144, 202, 245, 376, 405, 434, 492, 608, 667
Bsp1286I GDGCHC 1 cut(s) 78
Bsp143I GATC 3 cut(s) 461, 981, 1029
Bsp1720I GCTNAGC 2 cut(s) 449, 551
BspANI GGCC 9 cut(s) 144, 202, 245, 376, 405, 434, 492, 608, 667
BspCNI CTCAG 6 cut(s) 66, 297, 588, 835, 1026, 1028
BspLI GGNNCC 1 cut(s) 1031
BspPI GGATC 2 cut(s) 1024, 1037
BsrDI GCAATG 1 cut(s) 915
BssMI GATC 3 cut(s) 461, 981, 1029
BstDEI CTNAG 8 cut(s) 53, 284, 449, 551, 575, 822, 1015, 1034
BstF5I GGATG 5 cut(s) 224, 326, 558, 675, 1065
BstKTI GATC 3 cut(s) 464, 984, 1032
BstMAI GTCTC 1 cut(s) 1018
BstMBI GATC 3 cut(s) 461, 981, 1029
BstMCI CGRYCG 1 cut(s) 43
BstNSI RCATGY 1 cut(s) 1013
BstX2I RGATCY 1 cut(s) 1029
BstYI RGATCY 1 cut(s) 1029
BsuRI GGCC 9 cut(s) 144, 202, 245, 376, 405, 434, 492, 608, 667
BtsCI GGATG 5 cut(s) 224, 326, 558, 675, 1065
Cfr13I GGNCC 2 cut(s) 719, 777
Csp6I GTAC 1 cut(s) 898
CviAII CATG 1 cut(s) 1010
CviQI GTAC 1 cut(s) 898
DdeI CTNAG 8 cut(s) 53, 284, 449, 551, 575, 822, 1015, 1034
DpnI GATC 3 cut(s) 463, 983, 1031
DpnII GATC 3 cut(s) 461, 981, 1029
EaeI YGGCCR 9 cut(s) 142, 200, 243, 374, 403, 432, 490, 606, 665
Ecl136II GAGCTC 1 cut(s) 76
Eco24I GRGCYC 1 cut(s) 78
Eco47I GGWCC 2 cut(s) 719, 777
Eco53kI GAGCTC 1 cut(s) 76
EcoICRI GAGCTC 1 cut(s) 76
EcoRI GAATTC 1 cut(s) 866
EcoT38I GRGCYC 1 cut(s) 78
FaeI CATG 1 cut(s) 1013
FaiI YATR 5 cut(s) 875, 882, 933, 965, 1011
FaqI GGGAC 1 cut(s) 633
FatI CATG 1 cut(s) 1009
FblI GTMKAC 1 cut(s) 39
FokI GGATG 5 cut(s) 211, 313, 545, 662, 1052
FriOI GRGCYC 1 cut(s) 78
FspBI CTAG 1 cut(s) 857
HaeIII GGCC 9 cut(s) 144, 202, 245, 376, 405, 434, 492, 608, 667
Hin1II CATG 1 cut(s) 1013
HincII GTYRAC 3 cut(s) 10, 40, 955
HindII GTYRAC 3 cut(s) 10, 40, 955
HinfI GANTC 2 cut(s) 62, 860
Hpy166II GTNNAC 4 cut(s) 10, 40, 214, 955
Hpy188I TCNGA 6 cut(s) 27, 56, 85, 102, 865, 1018
Hpy188III TCNNGA 4 cut(s) 857, 908, 985, 1033
Hpy8I GTNNAC 4 cut(s) 10, 40, 214, 955
Hpy99I CGWCG 1 cut(s) 41
HpyAV CCTTC 1 cut(s) 888
HpyF3I CTNAG 8 cut(s) 53, 284, 449, 551, 575, 822, 1015, 1034
Hsp92II CATG 1 cut(s) 1013
Kzo9I GATC 3 cut(s) 461, 981, 1029
LmnI GCTCC 1 cut(s) 19
LpnPI CCDG 2 cut(s) 893, 1046
LweI GCATC 2 cut(s) 31, 1009
MaeI CTAG 1 cut(s) 857
MalI GATC 3 cut(s) 463, 983, 1031
MboI GATC 3 cut(s) 461, 981, 1029
MboII GAAGA 3 cut(s) 862, 1000, 1042
MflI RGATCY 1 cut(s) 1029
MhlI GDGCHC 1 cut(s) 78
MluCI AATT 2 cut(s) 866, 974
MlyI GAGTC 1 cut(s) 869
MseI TTAA 1 cut(s) 993
NdeII GATC 3 cut(s) 461, 981, 1029
NlaIII CATG 1 cut(s) 1013
NlaIV GGNNCC 1 cut(s) 1031
NspI RCATGY 1 cut(s) 1013
PfeI GAWTC 1 cut(s) 62
PleI GAGTC 1 cut(s) 868
PpsI GAGTC 1 cut(s) 868
PshBI ATTAAT 1 cut(s) 993
Psp124BI GAGCTC 1 cut(s) 78
PspN4I GGNNCC 1 cut(s) 1031
PspPI GGNCC 2 cut(s) 719, 777
PsuI RGATCY 1 cut(s) 1029
RsaI GTAC 1 cut(s) 899
RsaNI GTAC 1 cut(s) 898
SacI GAGCTC 1 cut(s) 78
SalI GTCGAC 1 cut(s) 38
SaqAI TTAA 1 cut(s) 993
Sau3AI GATC 3 cut(s) 461, 981, 1029
Sau96I GGNCC 2 cut(s) 719, 777
SchI GAGTC 1 cut(s) 869
SduI GDGCHC 1 cut(s) 78
SfaNI GCATC 2 cut(s) 31, 1009
SinI GGWCC 2 cut(s) 719, 777
Sse9I AATT 2 cut(s) 866, 974
SspI AATATT 1 cut(s) 1074
SspMI CTAG 1 cut(s) 857
SstI GAGCTC 1 cut(s) 78
TaqI TCGA 2 cut(s) 39, 460
TaqII GACCGA 7 cut(s) 57, 102, 160, 290, 726, 755, 784
TasI AATT 2 cut(s) 866, 974
TfiI GAWTC 1 cut(s) 62
Tru1I TTAA 1 cut(s) 993
Tru9I TTAA 1 cut(s) 993
TspDTI ATGAA 7 cut(s) 213, 301, 315, 547, 664, 862, 1042
TspGWI ACGGA 3 cut(s) 610, 683, 827
VpaK11BI GGWCC 2 cut(s) 719, 777
VspI ATTAAT 1 cut(s) 993
XapI RAATTY 2 cut(s) 866, 974
XbaI TCTAGA 1 cut(s) 856
XceI RCATGY 1 cut(s) 1013
XmiI GTMKAC 1 cut(s) 39
XspI CTAG 1 cut(s) 857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.