Basic Information
Type: gene
Physical Location & Seq
Forward (+)
2534607 .. 2535029
Rh5DG036000.1
Length: 234 bp
ATGACAAAATCAAAGCATTTTACTGTTAGGAAGGTAGAAAAGTTTGAGAAGAAAATAACGGAGAGAGGAGCAGTGCCGGAGAAAACTGCCAAAAGGGGGAAGGTCGACTCTGCTATTGGCCATGTTCCATCAGAAGTTTTGCCTCGTTTCTGCTGTGGCTTCTTCATCTTTGTTGTCATAGGATCATCTCTGTTTCGGACAATTAGGACTGCTACTAGCGGAAGCCTGGAGTAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
10.11
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| RAMP4 |
PF06624 |
9 - 70 |
5.4e-09 |
Ribosome associated membrane protein RAMP4 |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0030158)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AccI |
GTMKAC |
1 cut(s)
|
105 |
| AciI |
CCGC |
1 cut(s)
|
219 |
| AclWI |
GGATC |
1 cut(s)
|
190 |
| AcoI |
YGGCCR |
1 cut(s)
|
118 |
| AfiI |
CCNNNNNNNGG |
1 cut(s)
|
96 |
| AjnI |
CCWGG |
1 cut(s)
|
225 |
| AlwI |
GGATC |
1 cut(s)
|
190 |
| AoxI |
GGCC |
1 cut(s)
|
118 |
| BalI |
TGGCCA |
1 cut(s)
|
120 |
| BccI |
CCATC |
1 cut(s)
|
136 |
| BciT130I |
CCWGG |
1 cut(s)
|
227 |
| BfaI |
CTAG |
1 cut(s)
|
216 |
| Bme1390I |
CCNGG |
1 cut(s)
|
227 |
| BmrFI |
CCNGG |
1 cut(s)
|
227 |
| Bsc4I |
CCNNNNNNNGG |
1 cut(s)
|
96 |
| BseBI |
CCWGG |
1 cut(s)
|
227 |
| BseLI |
CCNNNNNNNGG |
1 cut(s)
|
96 |
| BseRI |
GAGGAG |
1 cut(s)
|
81 |
| BshFI |
GGCC |
1 cut(s)
|
120 |
| BsiSI |
CCGG |
1 cut(s)
|
77 |
| BslI |
CCNNNNNNNGG |
1 cut(s)
|
96 |
| BsnI |
GGCC |
1 cut(s)
|
120 |
| Bsp143I |
GATC |
1 cut(s)
|
182 |
| BspACI |
CCGC |
1 cut(s)
|
219 |
| BspANI |
GGCC |
1 cut(s)
|
120 |
| BspPI |
GGATC |
1 cut(s)
|
190 |
| BssMI |
GATC |
1 cut(s)
|
182 |
| Bst2UI |
CCWGG |
1 cut(s)
|
227 |
| Bst4CI |
ACNGT |
1 cut(s)
|
25 |
| BstKTI |
GATC |
1 cut(s)
|
185 |
| BstMBI |
GATC |
1 cut(s)
|
182 |
| BstNI |
CCWGG |
1 cut(s)
|
227 |
| BstSCI |
CCNGG |
1 cut(s)
|
225 |
| BsuRI |
GGCC |
1 cut(s)
|
120 |
| BtsI |
GCAGTG |
1 cut(s)
|
78 |
| BtsIMutI |
CAGTG |
1 cut(s)
|
78 |
| CviAII |
CATG |
1 cut(s)
|
122 |
| CviJI |
RGCY |
3 cut(s)
|
120, 159, 225 |
| CviKI_1 |
RGCY |
3 cut(s)
|
120, 159, 225 |
| DpnI |
GATC |
1 cut(s)
|
184 |
| DpnII |
GATC |
1 cut(s)
|
182 |
| EaeI |
YGGCCR |
1 cut(s)
|
118 |
| EcoRII |
CCWGG |
1 cut(s)
|
225 |
| FaeI |
CATG |
1 cut(s)
|
125 |
| FaiI |
YATR |
2 cut(s)
|
123, 179 |
| FatI |
CATG |
1 cut(s)
|
121 |
| FblI |
GTMKAC |
1 cut(s)
|
105 |
| FspBI |
CTAG |
1 cut(s)
|
216 |
| HaeIII |
GGCC |
1 cut(s)
|
120 |
| HapII |
CCGG |
1 cut(s)
|
77 |
| Hin1II |
CATG |
1 cut(s)
|
125 |
| HincII |
GTYRAC |
1 cut(s)
|
106 |
| HindII |
GTYRAC |
1 cut(s)
|
106 |
| HinfI |
GANTC |
1 cut(s)
|
107 |
| HpaII |
CCGG |
1 cut(s)
|
77 |
| Hpy166II |
GTNNAC |
1 cut(s)
|
106 |
| Hpy188I |
TCNGA |
2 cut(s)
|
133, 198 |
| Hpy8I |
GTNNAC |
1 cut(s)
|
106 |
| HpyAV |
CCTTC |
2 cut(s)
|
25, 94 |
| HpyCH4III |
ACNGT |
1 cut(s)
|
25 |
| Hsp92II |
CATG |
1 cut(s)
|
125 |
| Kzo9I |
GATC |
1 cut(s)
|
182 |
| LmnI |
GCTCC |
1 cut(s)
|
68 |
| LpnPI |
CCDG |
2 cut(s)
|
90, 212 |
| MaeI |
CTAG |
1 cut(s)
|
216 |
| MalI |
GATC |
1 cut(s)
|
184 |
| MboI |
GATC |
1 cut(s)
|
182 |
| MboII |
GAAGA |
2 cut(s)
|
61, 154 |
| MlsI |
TGGCCA |
1 cut(s)
|
120 |
| MluCI |
AATT |
1 cut(s)
|
201 |
| MluNI |
TGGCCA |
1 cut(s)
|
120 |
| MlyI |
GAGTC |
1 cut(s)
|
101 |
| MnlI |
CCTC |
2 cut(s)
|
59, 153 |
| Mox20I |
TGGCCA |
1 cut(s)
|
120 |
| MscI |
TGGCCA |
1 cut(s)
|
120 |
| Msp20I |
TGGCCA |
1 cut(s)
|
120 |
| MspI |
CCGG |
1 cut(s)
|
77 |
| MspR9I |
CCNGG |
1 cut(s)
|
227 |
| MvaI |
CCWGG |
1 cut(s)
|
227 |
| NdeII |
GATC |
1 cut(s)
|
182 |
| NlaIII |
CATG |
1 cut(s)
|
125 |
| PleI |
GAGTC |
1 cut(s)
|
101 |
| PpsI |
GAGTC |
1 cut(s)
|
101 |
| Psp6I |
CCWGG |
1 cut(s)
|
225 |
| PspGI |
CCWGG |
1 cut(s)
|
225 |
| SalI |
GTCGAC |
1 cut(s)
|
104 |
| Sau3AI |
GATC |
1 cut(s)
|
182 |
| SchI |
GAGTC |
1 cut(s)
|
101 |
| ScrFI |
CCNGG |
1 cut(s)
|
227 |
| SetI |
ASST |
2 cut(s)
|
36, 105 |
| SgeI |
CNNG |
4 cut(s)
|
89, 134, 156, 228 |
| Sse9I |
AATT |
1 cut(s)
|
201 |
| SsiI |
CCGC |
1 cut(s)
|
219 |
| SspMI |
CTAG |
1 cut(s)
|
216 |
| StyD4I |
CCNGG |
1 cut(s)
|
225 |
| TaaI |
ACNGT |
1 cut(s)
|
25 |
| TaqI |
TCGA |
1 cut(s)
|
105 |
| TasI |
AATT |
1 cut(s)
|
201 |
| TscAI |
CASTG |
1 cut(s)
|
78 |
| TspDTI |
ATGAA |
1 cut(s)
|
154 |
| TspGWI |
ACGGA |
1 cut(s)
|
74 |
| TspRI |
CASTG |
1 cut(s)
|
78 |
| XmiI |
GTMKAC |
1 cut(s)
|
105 |
| XspI |
CTAG |
1 cut(s)
|
216 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.