Rh5DG300800

Tornado 1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Reverse (-)
37762065 .. 37770537
8473 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG300800.1

Sequence Viewer

Length: 2934 bp
ATGGCAACAAGCCAGAACCTCAAAGATCTCCAATGGGTTCTGCAAGCTCTCGAATCCGAAAGCCTCGACCTACAAAACATCTCCTTCTACCTTTCACAACCCTCTTCTGGCTGCTACCAGGAAACCGAGAACTCCATGAACATAAACATTTCAAAAGACAGCCTCTCTTACTTTCCTCAGTTCCTCATAGTTTTAGGAACATCCAAAGCAATCCAATTGTCTCTAAGAAACTTGGAGTTCCACCAGATCGAATGGGAGCTCCAACAACTGCGTGATCTTGCTGTGTTGCTTGAGTGTAACTCAAACATCAAGTCAGTCATGTTTCGGAGAAACAGATTCGGAAGAGAGTGCATATCAGAGCTATCTGAAATTCTGAAGAGAAATGGAGTGATCAAAGAGGTAATGCTTACTGAATCAAATGTTGGGTCTGTGGGAGCTGGATTTCTTGCTTCTGCCCTTAAAGTGAATGATAGCTTGGAAGAGTTACAGATATGGGAAGACTCTATTGGCTCCAAGGGAGCAGAGGAGCTCTCAAAGATGATTGAAGTGAACTCAACACTGAAGCTGTTGACAATATTTGACTCGAATTCAATCACAGCAACCCCACTTATCTCTGCGGTTTTAGCAAGGAATAGAGCTATGGAAGTTCATGTGTGGAGTGGAGAAAATGGCGAAAAGAGTTCTAAGGTGGTTGAGTTTCTACCTGAAAATAGCACACTCCGAATTTACAGGCTCGACCTTTCAGGTGCATGCAGGGTTGCCTGTGCTCTTGGCTGGAACTCAACTGTCAAGTCACTCGACATGACTGGAGTGCGGTTGAAGTCAAGATGGGCCAAGGAGTTTCGATGGGTTTTGGAGCAAAACCAGAGCCTCAAAGAGGTAAATTTGTCGAAAACTTGCCTGAAAGATAAGGGAGTCATATATGTAGCAGCTGGACTATTCAAGAACCAGAGTTTGGAGAGCTTGTATTTGGATGGAAACAGATTTGGGGGTATAGGAGTTGAGCATTTACTCTGTCCTTTGAGCCGGTTTTCTGCACTGCAATATCAAGCAAACATTACTTTAAAGTCTGTGACATTTGGAGGTGGAAGAACAAAGATTGGAAGGGAGGGACTTGCAGCCATTTTACAGATGCTGACATCCAATGAAACTTTGACTCGGTTGGGGATATACGATGATGAGAGTTTAAGACCAGATGATTTTGTCAAACTTTTCAGGAGCTTGGAGAAGAATGCCTCCTTGAGACACCTATCTTTACAGGGCTGCAAGGGTGTTCAAGGAGAGTTCCTACTGCAAACAATCATGGAGACATTACAGGTAAATCCTTGGATTGAAGATATCGATCTTTCGAGAACACCACTGCAAAATTCAGGAAAGACTGATGGGCTCTATCAAAGATTGGGTCAGAATGGGAAGGCAGAACCTGAAACAGATTTGCTGAAGGACATGCCACTTACAGTGCCAAAGAGTTGTAGGGTATTTTTCTGTGGGCAAGAATATGCAGGTAAGACTACATTGTGCAATACAATATTGCAGAGTTTCTATTCATCAAAGCTTCCCCTTGTGGACCAAGTAAGATCTCTAGTGAACCCAGTTGAGCAAGCGGTCAGAACAGTCGGAGTGAAGATCAAAACATTCAAAGATGACGACACGAACATTTCAATATGGAATCTTGCTGGTCAGCATGAATTCTATTCCCTCCATGATCTCATGTTTCCGGGGCATGGGAGTGCATCATTCTTTCTCATAGTATCCAGTCTATTTAGGAAAACAAACAATAGAGAGCCAAAGAATGCAATGGAGATAGAAGAGGACCTCCAGTACTGGCTCAGGTTCATAGTGTCAAATTCAAAAAGAGCAGTTCAGCAATGCATGCTACCAAATGTGACAATCGTGCTCACGCACTATGACAAAGTCAATCAGCCATCACAGAACTTGCTGGTTGCAGTAAACTCAATCCAAATGTTGCGAGACAAGTTCCAGGGATTTGTTGACTTCTACCCAACAGTGTTCACAGTTGATGCAAGATCATCAGCATCAGTGAGTAAACTCACTCATCACCTTCTAACGACAAGCAGGACGGTTCTCCAAAGAGTTCCGAGAATCTATCAGCTTTGCAATGATCTTATGCAAATGCTATCAGACTGGAGATCAGAGAACTACAACAAGCCAGCCATGCAGTGGAAGGAGTTTGATGAGCTATGCCAAGTGAAGATTCCGTCCCTAAGAATTCGGTCAAGACATGATAACAGACCGAAGATGGAAAAGAGGCGACGAGCTGTAGCTACTTGCCTTCATCACATAGGAGAGTTAATATATTTTGATGAACTGGGGTTTCTAATCTTGGATTGTGAGTGGTTCTGTGGTGATGTGCTTGGCCAACTAATAAGACTAGATGTAAGAAAGCAAAGCTCCTCAGAGAATAATGGATTCATCAGCAGGAAAGATTTGGAGAAAATTCTTAGAGGAAGTCTACAGAGTCCAATTCCTGGAATGGGTTCAAAGATATTTGATAACTTAGAGGCTAGTGACCTAGTGAGGATGATGCTTAAACTCGAACTATGTTACCAACAAGACCCATCAGACCCTAACTCATTGCTATTCATTCCCTCACTTCTTGAAGAAGGCAGAGGAAAGCCACAAAGATGGCAGTTAAGCAGACCTGAATGCGTTTTTGCAGGTAGGCATCTTGAATGTGATGATTCAAGCCACATGTTCCTCACACCGGGATTCTTTCCTCGATTACAGGTAAGACTTACCCCAATCCTTATTTTCATTTTTATTTCAGTTCTTGTTGATATTTCTCTCTTAACTTTCTTAAGCTATAAGGAAAATTATTTTGAAGTGTCTAAGCACAAACTGATGAGAAAATCTTGCTATTGCTTTGCTGTTATAATTGTTCCATGCCACATGAGTCATGGTGATTTTAGCTAA

Protein Analysis

977

Amino Acids

111.11

Weight (kDa)

7.91

Isoelectric Point (pI)

50.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Roc PF08477 492 - 618 5.3e-06 Ras of Complex, Roc, domain of DAPkinase
COR-A PF16095 753 - 873 3.2e-09 C-terminal of Roc, COR-A domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0033481)

Species Orthologous Gene IDs
rosa_samantha Rh5BG291100 Rh5DG300800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2894
Acc36I ACCTGC 2 cut(s) 1493, 2669
AccB7I CCANNNNNTGG 3 cut(s) 955, 2181, 2489
AccI GTMKAC 1 cut(s) 2473
AciI CCGC 3 cut(s) 617, 814, 1604
AcoI YGGCCR 1 cut(s) 2377
AcsI RAATTY 9 cut(s) 369, 586, 723, 883, 1366, 1688, 1846, 2229, 2457
AcuI CTGAAG 3 cut(s) 395, 581, 1460
AfaI GTAC 1 cut(s) 1823
AfiI CCNNNNNNNGG 8 cut(s) 107, 877, 955, 1724, 2181, 2489, 2495, 2725
AflII CTTAAG 1 cut(s) 2818
AflIII ACRYGT 1 cut(s) 2712
AjnI CCWGG 3 cut(s) 117, 1980, 2488
Alw21I GWGCWC 4 cut(s) 261, 531, 769, 1899
Alw26I GTCTC 4 cut(s) 225, 1237, 1301, 1965
AlwNI CAGNNNCTG 2 cut(s) 1135, 1424
AoxI GGCC 2 cut(s) 831, 2377
ApeKI GCWGC 4 cut(s) 111, 929, 1118, 1263
ApoI RAATTY 9 cut(s) 369, 586, 723, 883, 1366, 1688, 1846, 2229, 2457
ArsI GACNNNNNNTTYG 6 cut(s) 296, 328, 410, 442, 1387, 1419
Asp700I GAANNNNTTC 1 cut(s) 2497
AspS9I GGNCC 3 cut(s) 831, 1567, 1813
AsuC2I CCSGG 2 cut(s) 1719, 2727
AsuHPI GGTGA 3 cut(s) 2051, 2378, 2933
AvaII GGWCC 2 cut(s) 1567, 1813
BalI TGGCCA 1 cut(s) 2379
BanII GRGCYC 3 cut(s) 261, 531, 1389
BbsI GAAGAC 1 cut(s) 504
Bbv12I GWGCWC 4 cut(s) 261, 531, 769, 1899
BbvI GCAGC 4 cut(s) 98, 941, 1130, 1250
BccI CCATC 8 cut(s) 822, 840, 968, 1376, 1933, 2254, 2587, 2640
BciT130I CCWGG 3 cut(s) 119, 1982, 2490
BciVI GTATCC 1 cut(s) 1762
BclI TGATCA 1 cut(s) 390
BcnI CCSGG 2 cut(s) 1719, 2727
BcoDI GTCTC 4 cut(s) 225, 1237, 1301, 1965
BfaI CTAG 4 cut(s) 1583, 2393, 2526, 2534
BfmI CTRYAG 2 cut(s) 2280, 2474
BfrI CTTAAG 1 cut(s) 2818
BfuAI ACCTGC 2 cut(s) 1493, 2669
BfuI GTATCC 1 cut(s) 1762
BglII AGATCT 2 cut(s) 25, 1577
BisI GCNGC 4 cut(s) 112, 930, 1119, 1264
BlsI GCNGC 4 cut(s) 113, 931, 1120, 1265
BmcAI AGTACT 1 cut(s) 1823
Bme1390I CCNGG 5 cut(s) 119, 1719, 1982, 2490, 2727
Bme18I GGWCC 2 cut(s) 1567, 1813
BmgT120I GGNCC 3 cut(s) 831, 1567, 1813
BmiI GGNNCC 1 cut(s) 511
BmrFI CCNGG 5 cut(s) 119, 1719, 1982, 2490, 2727
BmrI ACTGGG 2 cut(s) 1586, 2339
BmsI GCATC 6 cut(s) 1122, 1742, 2011, 2045, 2535, 2695
BmuI ACTGGG 2 cut(s) 1586, 2339
BpiI GAAGAC 1 cut(s) 504
BplI GAGNNNNNCTC 4 cut(s) 284, 316, 515, 547
BpmI CTGGAG 3 cut(s) 828, 1802, 2167
Bpu10I CCTNAGC 1 cut(s) 1829
BpuEI CTTGAG 2 cut(s) 311, 1261
BpuMI CCSGG 2 cut(s) 1719, 2727
Bsa29I ATCGAT 1 cut(s) 1341
BsaBI GATNNNNATC 1 cut(s) 1341
BsaJI CCNNGG 5 cut(s) 513, 834, 1325, 1718, 1981
BsaXI ACNNNNNCTCC 2 cut(s) 950, 980
Bsc4I CCNNNNNNNGG 8 cut(s) 107, 877, 955, 1724, 2181, 2489, 2495, 2725
Bse118I RCCGGY 1 cut(s) 1026
Bse1I ACTGG 7 cut(s) 811, 1592, 1755, 1819, 1829, 2150, 2334
Bse3DI GCAATG 4 cut(s) 1803, 1874, 2125, 2594
Bse8I GATNNNNATC 1 cut(s) 1341
BseBI CCWGG 3 cut(s) 119, 1982, 2490
BseCI ATCGAT 1 cut(s) 1341
BseDI CCNNGG 5 cut(s) 513, 834, 1325, 1718, 1981
BseGI GGATG 4 cut(s) 200, 979, 1139, 2547
BseJI GATNNNNATC 1 cut(s) 1341
BseLI CCNNNNNNNGG 8 cut(s) 107, 877, 955, 1724, 2181, 2489, 2495, 2725
BseMI GCAATG 4 cut(s) 1803, 1874, 2125, 2594
BseMII CTCAG 3 cut(s) 191, 1843, 2430
BseNI ACTGG 7 cut(s) 811, 1592, 1755, 1819, 1829, 2150, 2334
BseRI GAGGAG 2 cut(s) 539, 2404
BseXI GCAGC 4 cut(s) 98, 941, 1130, 1250
BsgI GTGCAG 1 cut(s) 1020
BshFI GGCC 2 cut(s) 833, 2379
BshVI ATCGAT 1 cut(s) 1341
BsiHKAI GWGCWC 4 cut(s) 261, 531, 769, 1899
BsiSI CCGG 3 cut(s) 1027, 1718, 2726
BslFI GGGAC 2 cut(s) 1125, 2206
BslI CCNNNNNNNGG 8 cut(s) 107, 877, 955, 1724, 2181, 2489, 2495, 2725
BsmAI GTCTC 4 cut(s) 225, 1237, 1301, 1965
BsmFI GGGAC 2 cut(s) 1125, 2206
BsmI GAATGC 3 cut(s) 1237, 1798, 2672
BsnI GGCC 2 cut(s) 833, 2379
Bsp1286I GDGCHC 5 cut(s) 261, 531, 769, 1389, 1899
BspACI CCGC 3 cut(s) 617, 814, 1604
BspANI GGCC 2 cut(s) 833, 2379
BspCNI CTCAG 3 cut(s) 190, 1842, 2429
BspDI ATCGAT 1 cut(s) 1341
BspLI GGNNCC 1 cut(s) 511
BspMI ACCTGC 2 cut(s) 1493, 2669
BspTI CTTAAG 1 cut(s) 2818
BsrDI GCAATG 4 cut(s) 1803, 1874, 2125, 2594
BsrFI RCCGGY 1 cut(s) 1026
BsrI ACTGG 7 cut(s) 811, 1592, 1755, 1819, 1829, 2150, 2334
BssAI RCCGGY 1 cut(s) 1026
BssECI CCNNGG 5 cut(s) 513, 834, 1325, 1718, 1981
BssT1I CCWWGG 3 cut(s) 513, 834, 1325
Bst2UI CCWGG 3 cut(s) 119, 1982, 2490
Bst4CI ACNGT 6 cut(s) 787, 1459, 1615, 2008, 2017, 2083
Bst6I CTCTTC 5 cut(s) 109, 337, 371, 474, 1803
BstAFI CTTAAG 1 cut(s) 2818
BstAPI GCANNNNNTGC 1 cut(s) 1873
BstC8I GCNNGC 5 cut(s) 45, 751, 1602, 1874, 2172
BstDEI CTNAG 9 cut(s) 177, 224, 684, 1829, 2225, 2416, 2462, 2518, 2850
BstENI CCTNNNNNAGG 1 cut(s) 875
BstF5I GGATG 4 cut(s) 200, 979, 1139, 2547
BstMAI GTCTC 4 cut(s) 225, 1237, 1301, 1965
BstMWI GCNNNNNNNGC 3 cut(s) 623, 1873, 2176
BstNI CCWGG 3 cut(s) 119, 1982, 2490
BstNSI RCATGY 4 cut(s) 753, 1450, 1876, 2716
BstSCI CCNGG 5 cut(s) 117, 1717, 1980, 2488, 2725
BstSFI CTRYAG 2 cut(s) 2280, 2474
BstV1I GCAGC 4 cut(s) 98, 941, 1130, 1250
BstV2I GAAGAC 1 cut(s) 504
BstX2I RGATCY 2 cut(s) 25, 1577
BstXI CCANNNNNNTGG 1 cut(s) 2646
BstYI RGATCY 2 cut(s) 25, 1577
Bsu15I ATCGAT 1 cut(s) 1341
BsuI GTATCC 1 cut(s) 1762
BsuRI GGCC 2 cut(s) 833, 2379
BsuTUI ATCGAT 1 cut(s) 1341
BtsCI GGATG 4 cut(s) 200, 979, 1139, 2547
BtsI GCAGTG 3 cut(s) 1037, 1358, 2186
BtsIMutI CAGTG 7 cut(s) 557, 1037, 1358, 1464, 2013, 2046, 2186
BveI ACCTGC 2 cut(s) 1493, 2669
Cac8I GCNNGC 5 cut(s) 45, 751, 1602, 1874, 2172
CaiI CAGNNNCTG 2 cut(s) 1135, 1424
Cfr10I RCCGGY 1 cut(s) 1026
Cfr13I GGNCC 3 cut(s) 831, 1567, 1813
ClaI ATCGAT 1 cut(s) 1341
Csp6I GTAC 1 cut(s) 1822
CviQI GTAC 1 cut(s) 1822
DdeI CTNAG 9 cut(s) 177, 224, 684, 1829, 2225, 2416, 2462, 2518, 2850
DraI TTTAAA 1 cut(s) 1065
EaeI YGGCCR 1 cut(s) 2377
Eam1104I CTCTTC 5 cut(s) 109, 337, 371, 474, 1803
EarI CTCTTC 5 cut(s) 109, 337, 371, 474, 1803
Ecl136II GAGCTC 2 cut(s) 259, 529
Eco130I CCWWGG 3 cut(s) 513, 834, 1325
Eco24I GRGCYC 3 cut(s) 261, 531, 1389
Eco32I GATATC 1 cut(s) 1339
Eco47I GGWCC 2 cut(s) 1567, 1813
Eco53kI GAGCTC 2 cut(s) 259, 529
Eco57I CTGAAG 3 cut(s) 395, 581, 1460
EcoICRI GAGCTC 2 cut(s) 259, 529
EcoNI CCTNNNNNAGG 1 cut(s) 875
EcoO109I RGGNCCY 1 cut(s) 1813
EcoRI GAATTC 3 cut(s) 586, 1688, 2229
EcoRII CCWGG 3 cut(s) 117, 1980, 2488
EcoRV GATATC 1 cut(s) 1339
EcoT14I CCWWGG 3 cut(s) 513, 834, 1325
EcoT22I ATGCAT 1 cut(s) 1874
EcoT38I GRGCYC 3 cut(s) 261, 531, 1389
ErhI CCWWGG 3 cut(s) 513, 834, 1325
FaqI GGGAC 2 cut(s) 1125, 2206
FbaI TGATCA 1 cut(s) 390
FblI GTMKAC 1 cut(s) 2473
Fnu4HI GCNGC 4 cut(s) 112, 930, 1119, 1264
FokI GGATG 4 cut(s) 187, 986, 1126, 2554
FriOI GRGCYC 3 cut(s) 261, 531, 1389
Fsp4HI GCNGC 4 cut(s) 112, 930, 1119, 1264
FspBI CTAG 4 cut(s) 1583, 2393, 2526, 2534
GluI GCNGC 4 cut(s) 112, 930, 1119, 1264
GsuI CTGGAG 3 cut(s) 828, 1802, 2167
HaeIII GGCC 2 cut(s) 833, 2379
HapII CCGG 3 cut(s) 1027, 1718, 2726
HincII GTYRAC 2 cut(s) 570, 1993
HindII GTYRAC 2 cut(s) 570, 1993
HindIII AAGCTT 1 cut(s) 1553
HpaII CCGG 3 cut(s) 1027, 1718, 2726
HphI GGTGA 3 cut(s) 2051, 2378, 2933
Hpy166II GTNNAC 9 cut(s) 550, 570, 1567, 1588, 1951, 1993, 2013, 2048, 2474
Hpy188III TCNNGA 9 cut(s) 50, 825, 943, 1216, 1350, 1371, 2238, 2618, 2690
Hpy8I GTNNAC 9 cut(s) 550, 570, 1567, 1588, 1951, 1993, 2013, 2048, 2474
Hpy99I CGWCG 1 cut(s) 2277
HpyAV CCTTC 8 cut(s) 94, 1098, 1408, 1435, 2072, 2179, 2303, 2618
HpyCH4III ACNGT 6 cut(s) 787, 1459, 1615, 2008, 2017, 2083
HpyF10VI GCNNNNNNNGC 3 cut(s) 623, 1873, 2176
HpyF3I CTNAG 9 cut(s) 177, 224, 684, 1829, 2225, 2416, 2462, 2518, 2850
Ksp22I TGATCA 1 cut(s) 390
LmnI GCTCC 9 cut(s) 256, 264, 434, 515, 518, 526, 856, 1218, 2417
Lsp1109I GCAGC 4 cut(s) 98, 941, 1130, 1250
LweI GCATC 6 cut(s) 1122, 1742, 2011, 2045, 2535, 2695
MaeI CTAG 4 cut(s) 1583, 2393, 2526, 2534
MaeIII GTNAC 7 cut(s) 296, 483, 792, 1072, 1885, 2528, 2564
MfeI CAATTG 1 cut(s) 215
MflI RGATCY 2 cut(s) 25, 1577
MhlI GDGCHC 5 cut(s) 261, 531, 769, 1389, 1899
MlsI TGGCCA 1 cut(s) 2379
MluNI TGGCCA 1 cut(s) 2379
MlyI GAGTC 6 cut(s) 494, 575, 924, 1150, 2488, 2923
MmeI TCCRAC 2 cut(s) 286, 1597
Mox20I TGGCCA 1 cut(s) 2379
Mph1103I ATGCAT 1 cut(s) 1874
MroXI GAANNNNTTC 1 cut(s) 2497
MscI TGGCCA 1 cut(s) 2379
MseI TTAA 8 cut(s) 459, 1064, 1187, 2312, 2550, 2654, 2810, 2819
MslI CAYNNNNRTG 2 cut(s) 1728, 2644
Msp20I TGGCCA 1 cut(s) 2379
MspA1I CMGCKG 1 cut(s) 932
MspCI CTTAAG 1 cut(s) 2818
MspI CCGG 3 cut(s) 1027, 1718, 2726
MspR9I CCNGG 5 cut(s) 119, 1719, 1982, 2490, 2727
MunI CAATTG 1 cut(s) 215
Mva1269I GAATGC 3 cut(s) 1237, 1798, 2672
MvaI CCWGG 3 cut(s) 119, 1982, 2490
MwoI GCNNNNNNNGC 3 cut(s) 623, 1873, 2176
NciI CCSGG 2 cut(s) 1719, 2727
NlaIV GGNNCC 1 cut(s) 511
NmuCI GTSAC 4 cut(s) 792, 1072, 1885, 2528
NsiI ATGCAT 1 cut(s) 1874
NspI RCATGY 4 cut(s) 753, 1450, 1876, 2716
PaeI GCATGC 2 cut(s) 753, 1876
PciI ACATGT 1 cut(s) 2712
PctI GAATGC 3 cut(s) 1237, 1798, 2672
PdmI GAANNNNTTC 1 cut(s) 2497
PfeI GAWTC 9 cut(s) 53, 336, 413, 1669, 2103, 2215, 2430, 2702, 2730
PflFI GACNNNGTC 1 cut(s) 1913
PflMI CCANNNNNTGG 3 cut(s) 955, 2181, 2489
PfoI TCCNGGA 1 cut(s) 2488
PkrI GCNGC 4 cut(s) 113, 931, 1120, 1265
PleI GAGTC 6 cut(s) 494, 575, 923, 1150, 2487, 2922
PpsI GAGTC 6 cut(s) 494, 575, 923, 1150, 2487, 2922
PpuMI RGGWCCY 1 cut(s) 1813
PscI ACATGT 1 cut(s) 2712
PsiI TTATAA 1 cut(s) 2894
Psp124BI GAGCTC 2 cut(s) 261, 531
Psp5II RGGWCCY 1 cut(s) 1813
Psp6I CCWGG 3 cut(s) 117, 1980, 2488
PspGI CCWGG 3 cut(s) 117, 1980, 2488
PspN4I GGNNCC 1 cut(s) 511
PspPI GGNCC 3 cut(s) 831, 1567, 1813
PspPPI RGGWCCY 1 cut(s) 1813
PstNI CAGNNNCTG 2 cut(s) 1135, 1424
PsuI RGATCY 2 cut(s) 25, 1577
PsyI GACNNNGTC 1 cut(s) 1913
PvuII CAGCTG 1 cut(s) 932
RsaI GTAC 1 cut(s) 1823
RsaNI GTAC 1 cut(s) 1822
RseI CAYNNNNRTG 2 cut(s) 1728, 2644
SacI GAGCTC 2 cut(s) 261, 531
SaqAI TTAA 8 cut(s) 459, 1064, 1187, 2312, 2550, 2654, 2810, 2819
SatI GCNGC 4 cut(s) 112, 930, 1119, 1264
Sau96I GGNCC 3 cut(s) 831, 1567, 1813
ScaI AGTACT 1 cut(s) 1823
SchI GAGTC 6 cut(s) 494, 575, 924, 1150, 2488, 2923
ScrFI CCNGG 5 cut(s) 119, 1719, 1982, 2490, 2727
SduI GDGCHC 5 cut(s) 261, 531, 769, 1389, 1899
SfaNI GCATC 6 cut(s) 1122, 1742, 2011, 2045, 2535, 2695
SfcI CTRYAG 2 cut(s) 2280, 2474
SinI GGWCC 2 cut(s) 1567, 1813
SmiMI CAYNNNNRTG 2 cut(s) 1728, 2644
SmlI CTYRAG 3 cut(s) 290, 1240, 2818
SmoI CTYRAG 3 cut(s) 290, 1240, 2818
SphI GCATGC 2 cut(s) 753, 1876
SsiI CCGC 3 cut(s) 617, 814, 1604
SspI AATATT 2 cut(s) 576, 1530
SspMI CTAG 4 cut(s) 1583, 2393, 2526, 2534
SstI GAGCTC 2 cut(s) 261, 531
StyD4I CCNGG 5 cut(s) 117, 1717, 1980, 2488, 2725
StyI CCWWGG 3 cut(s) 513, 834, 1325
TaaI ACNGT 6 cut(s) 787, 1459, 1615, 2008, 2017, 2083
TaqII GACCGA 2 cut(s) 2223, 2269
TatI WGTACW 1 cut(s) 1821
TfiI GAWTC 9 cut(s) 53, 336, 413, 1669, 2103, 2215, 2430, 2702, 2730
Tru1I TTAA 8 cut(s) 459, 1064, 1187, 2312, 2550, 2654, 2810, 2819
Tru9I TTAA 8 cut(s) 459, 1064, 1187, 2312, 2550, 2654, 2810, 2819
TscAI CASTG 7 cut(s) 564, 1044, 1365, 1464, 2013, 2046, 2186
TseFI GTSAC 4 cut(s) 792, 1072, 1885, 2528
TseI GCWGC 4 cut(s) 111, 929, 1118, 1263
Tsp45I GTSAC 4 cut(s) 792, 1072, 1885, 2528
TspGWI ACGGA 1 cut(s) 2208
TspRI CASTG 7 cut(s) 564, 1044, 1365, 1464, 2013, 2046, 2186
Tth111I GACNNNGTC 1 cut(s) 1913
Van91I CCANNNNNTGG 3 cut(s) 955, 2181, 2489
Vha464I CTTAAG 1 cut(s) 2818
VpaK11BI GGWCC 2 cut(s) 1567, 1813
XagI CCTNNNNNAGG 1 cut(s) 875
XapI RAATTY 9 cut(s) 369, 586, 723, 883, 1366, 1688, 1846, 2229, 2457
XceI RCATGY 4 cut(s) 753, 1450, 1876, 2716
XcmI CCANNNNNNNNNTGG 2 cut(s) 2178, 2915
XmiI GTMKAC 1 cut(s) 2473
XmnI GAANNNNTTC 1 cut(s) 2497
XspI CTAG 4 cut(s) 1583, 2393, 2526, 2534
ZrmI AGTACT 1 cut(s) 1823
Zsp2I ATGCAT 1 cut(s) 1874
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.