nudC domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr6g0251941 |
| rosa_roxburghii | Rroxscaffold_7G00216280 |
| rosa_samantha | Rh6AG016500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 116, 129, 194 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 104 |
| AgsI | TTSAA | 3 cut(s) | 143, 173, 184 |
| AhlI | ACTAGT | 1 cut(s) | 22 |
| AluBI | AGCT | 1 cut(s) | 118 |
| AluI | AGCT | 1 cut(s) | 118 |
| AlwI | GGATC | 3 cut(s) | 116, 129, 194 |
| ApeKI | GCWGC | 1 cut(s) | 192 |
| AspLEI | GCGC | 1 cut(s) | 197 |
| AsuHPI | GGTGA | 1 cut(s) | 87 |
| BamHI | GGATCC | 1 cut(s) | 121 |
| BbvI | GCAGC | 1 cut(s) | 179 |
| BcuI | ACTAGT | 1 cut(s) | 22 |
| BfaI | CTAG | 2 cut(s) | 23, 30 |
| BfmI | CTRYAG | 1 cut(s) | 99 |
| BisI | GCNGC | 1 cut(s) | 193 |
| BlsI | GCNGC | 1 cut(s) | 194 |
| BmiI | GGNNCC | 1 cut(s) | 123 |
| BoxI | GACNNNNGTC | 2 cut(s) | 23, 78 |
| BpmI | CTGGAG | 1 cut(s) | 146 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 104 |
| BseGI | GGATG | 1 cut(s) | 46 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 104 |
| BseXI | GCAGC | 1 cut(s) | 179 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 104 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| Bsp143I | GATC | 2 cut(s) | 121, 199 |
| BspLI | GGNNCC | 1 cut(s) | 123 |
| BspPI | GGATC | 3 cut(s) | 116, 129, 194 |
| BssMI | GATC | 2 cut(s) | 121, 199 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| Bst6I | CTCTTC | 1 cut(s) | 171 |
| BstF5I | GGATG | 1 cut(s) | 46 |
| BstHHI | GCGC | 1 cut(s) | 197 |
| BstKTI | GATC | 2 cut(s) | 124, 202 |
| BstMBI | GATC | 2 cut(s) | 121, 199 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 157 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 23, 78 |
| BstSFI | CTRYAG | 1 cut(s) | 99 |
| BstV1I | GCAGC | 1 cut(s) | 179 |
| BstX2I | RGATCY | 1 cut(s) | 121 |
| BstYI | RGATCY | 1 cut(s) | 121 |
| BtsCI | GGATG | 1 cut(s) | 46 |
| BtsI | GCAGTG | 1 cut(s) | 59 |
| BtsIMutI | CAGTG | 1 cut(s) | 59 |
| CfoI | GCGC | 1 cut(s) | 197 |
| CseI | GACGC | 1 cut(s) | 140 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 121, 156 |
| CviAII | CATG | 2 cut(s) | 87, 214 |
| CviJI | RGCY | 3 cut(s) | 92, 118, 192 |
| CviKI_1 | RGCY | 3 cut(s) | 92, 118, 192 |
| DpnI | GATC | 2 cut(s) | 123, 201 |
| DpnII | GATC | 2 cut(s) | 121, 199 |
| Eam1104I | CTCTTC | 1 cut(s) | 171 |
| EarI | CTCTTC | 1 cut(s) | 171 |
| FaeI | CATG | 2 cut(s) | 90, 217 |
| FaiI | YATR | 7 cut(s) | 47, 56, 88, 101, 158, 215, 238 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FatI | CATG | 2 cut(s) | 86, 213 |
| Fnu4HI | GCNGC | 1 cut(s) | 193 |
| FokI | GGATG | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 193 |
| FspBI | CTAG | 2 cut(s) | 23, 30 |
| GlaI | GCGC | 1 cut(s) | 196 |
| GluI | GCNGC | 1 cut(s) | 193 |
| GsuI | CTGGAG | 1 cut(s) | 146 |
| HgaI | GACGC | 1 cut(s) | 140 |
| HhaI | GCGC | 1 cut(s) | 197 |
| Hin1II | CATG | 2 cut(s) | 90, 217 |
| Hin6I | GCGC | 1 cut(s) | 195 |
| HinP1I | GCGC | 1 cut(s) | 195 |
| HinfI | GANTC | 1 cut(s) | 233 |
| HphI | GGTGA | 1 cut(s) | 87 |
| Hpy188I | TCNGA | 2 cut(s) | 84, 232 |
| Hpy188III | TCNNGA | 4 cut(s) | 16, 140, 163, 173 |
| HpyAV | CCTTC | 1 cut(s) | 220 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4V | TGCA | 2 cut(s) | 52, 64 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 157 |
| Hsp92II | CATG | 2 cut(s) | 90, 217 |
| HspAI | GCGC | 1 cut(s) | 195 |
| Kzo9I | GATC | 2 cut(s) | 121, 199 |
| LmnI | GCTCC | 2 cut(s) | 165, 233 |
| LpnPI | CCDG | 2 cut(s) | 104, 176 |
| Lsp1109I | GCAGC | 1 cut(s) | 179 |
| MaeI | CTAG | 2 cut(s) | 23, 30 |
| MaeIII | GTNAC | 1 cut(s) | 25 |
| MalI | GATC | 2 cut(s) | 123, 201 |
| MboI | GATC | 2 cut(s) | 121, 199 |
| MboII | GAAGA | 1 cut(s) | 188 |
| MflI | RGATCY | 1 cut(s) | 121 |
| MnlI | CCTC | 4 cut(s) | 31, 63, 103, 159 |
| MspA1I | CMGCKG | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 157 |
| NdeII | GATC | 2 cut(s) | 121, 199 |
| NlaIII | CATG | 2 cut(s) | 90, 217 |
| NlaIV | GGNNCC | 1 cut(s) | 123 |
| NmuCI | GTSAC | 1 cut(s) | 25 |
| PfeI | GAWTC | 1 cut(s) | 233 |
| PkrI | GCNGC | 1 cut(s) | 194 |
| PshAI | GACNNNNGTC | 2 cut(s) | 23, 78 |
| PspN4I | GGNNCC | 1 cut(s) | 123 |
| PsuI | RGATCY | 1 cut(s) | 121 |
| PvuII | CAGCTG | 1 cut(s) | 118 |
| SatI | GCNGC | 1 cut(s) | 193 |
| Sau3AI | GATC | 2 cut(s) | 121, 199 |
| SetI | ASST | 5 cut(s) | 82, 100, 120, 170, 212 |
| SfcI | CTRYAG | 1 cut(s) | 99 |
| SpeI | ACTAGT | 1 cut(s) | 22 |
| SspMI | CTAG | 2 cut(s) | 23, 30 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TfiI | GAWTC | 1 cut(s) | 233 |
| TscAI | CASTG | 1 cut(s) | 66 |
| TseFI | GTSAC | 1 cut(s) | 25 |
| TseI | GCWGC | 1 cut(s) | 192 |
| Tsp45I | GTSAC | 1 cut(s) | 25 |
| TspDTI | ATGAA | 2 cut(s) | 202, 225 |
| TspRI | CASTG | 1 cut(s) | 66 |
| XspI | CTAG | 2 cut(s) | 23, 30 |