Transcription initiation factor TFIID subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0000258.1_g000039 |
| rosa_samantha | Rh7AG278200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 33 |
| Acc36I | ACCTGC | 1 cut(s) | 85 |
| AcuI | CTGAAG | 1 cut(s) | 191 |
| AcyI | GRCGYC | 1 cut(s) | 267 |
| AfaI | GTAC | 1 cut(s) | 108 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 125 |
| AgeI | ACCGGT | 1 cut(s) | 178 |
| AgsI | TTSAA | 3 cut(s) | 20, 74, 254 |
| AluBI | AGCT | 5 cut(s) | 116, 169, 205, 211, 235 |
| AluI | AGCT | 5 cut(s) | 116, 169, 205, 211, 235 |
| ApeKI | GCWGC | 1 cut(s) | 113 |
| AsiGI | ACCGGT | 1 cut(s) | 178 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 69 |
| AsuNHI | GCTAGC | 1 cut(s) | 55 |
| BbvI | GCAGC | 1 cut(s) | 125 |
| BccI | CCATC | 2 cut(s) | 119, 146 |
| BfaI | CTAG | 2 cut(s) | 56, 198 |
| BfmI | CTRYAG | 1 cut(s) | 99 |
| BfuAI | ACCTGC | 1 cut(s) | 85 |
| BisI | GCNGC | 1 cut(s) | 114 |
| BlsI | GCNGC | 1 cut(s) | 115 |
| BmcAI | AGTACT | 1 cut(s) | 108 |
| BmsI | GCATC | 1 cut(s) | 320 |
| BmtI | GCTAGC | 1 cut(s) | 59 |
| BsaHI | GRCGYC | 1 cut(s) | 267 |
| BsaWI | WCCGGW | 1 cut(s) | 178 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 125 |
| Bse118I | RCCGGY | 1 cut(s) | 178 |
| Bse1I | ACTGG | 2 cut(s) | 56, 280 |
| BseGI | GGATG | 1 cut(s) | 154 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseMII | CTCAG | 1 cut(s) | 222 |
| BseNI | ACTGG | 2 cut(s) | 56, 280 |
| BseRI | GAGGAG | 1 cut(s) | 259 |
| BseXI | GCAGC | 1 cut(s) | 125 |
| BshTI | ACCGGT | 1 cut(s) | 178 |
| BsiSI | CCGG | 1 cut(s) | 179 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BspCNI | CTCAG | 1 cut(s) | 223 |
| BspMI | ACCTGC | 1 cut(s) | 85 |
| BspOI | GCTAGC | 1 cut(s) | 59 |
| BsrFI | RCCGGY | 1 cut(s) | 178 |
| BsrI | ACTGG | 2 cut(s) | 56, 280 |
| BssAI | RCCGGY | 1 cut(s) | 178 |
| BssNI | GRCGYC | 1 cut(s) | 267 |
| BstACI | GRCGYC | 1 cut(s) | 267 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 317 |
| BstC8I | GCNNGC | 1 cut(s) | 57 |
| BstDEI | CTNAG | 2 cut(s) | 25, 231 |
| BstF5I | GGATG | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 317 |
| BstNSI | RCATGY | 1 cut(s) | 191 |
| BstSFI | CTRYAG | 1 cut(s) | 99 |
| BstV1I | GCAGC | 1 cut(s) | 125 |
| BtsCI | GGATG | 1 cut(s) | 154 |
| BtsIMutI | CAGTG | 2 cut(s) | 49, 228 |
| BveI | ACCTGC | 1 cut(s) | 85 |
| Cac8I | GCNNGC | 1 cut(s) | 57 |
| Cfr10I | RCCGGY | 1 cut(s) | 178 |
| CseI | GACGC | 1 cut(s) | 256 |
| Csp6I | GTAC | 1 cut(s) | 107 |
| CspAI | ACCGGT | 1 cut(s) | 178 |
| CviAII | CATG | 2 cut(s) | 188, 257 |
| CviJI | RGCY | 7 cut(s) | 55, 116, 169, 205, 211, 235, 291 |
| CviKI_1 | RGCY | 7 cut(s) | 55, 116, 169, 205, 211, 235, 291 |
| CviQI | GTAC | 1 cut(s) | 107 |
| DdeI | CTNAG | 2 cut(s) | 25, 231 |
| Eco57I | CTGAAG | 1 cut(s) | 191 |
| EcoT22I | ATGCAT | 1 cut(s) | 313 |
| FaeI | CATG | 2 cut(s) | 191, 260 |
| FaiI | YATR | 6 cut(s) | 33, 138, 189, 214, 258, 294 |
| FatI | CATG | 2 cut(s) | 187, 256 |
| Fnu4HI | GCNGC | 1 cut(s) | 114 |
| FokI | GGATG | 1 cut(s) | 161 |
| Fsp4HI | GCNGC | 1 cut(s) | 114 |
| FspBI | CTAG | 2 cut(s) | 56, 198 |
| GluI | GCNGC | 1 cut(s) | 114 |
| HapII | CCGG | 1 cut(s) | 179 |
| HgaI | GACGC | 1 cut(s) | 256 |
| Hin1I | GRCGYC | 1 cut(s) | 267 |
| Hin1II | CATG | 2 cut(s) | 191, 260 |
| HinfI | GANTC | 3 cut(s) | 44, 276, 327 |
| HpaII | CCGG | 1 cut(s) | 179 |
| Hpy188I | TCNGA | 3 cut(s) | 124, 288, 332 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 198, 241 |
| Hpy99I | CGWCG | 1 cut(s) | 9 |
| HpyAV | CCTTC | 2 cut(s) | 59, 129 |
| HpyCH4V | TGCA | 6 cut(s) | 80, 95, 113, 305, 311, 320 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 317 |
| HpyF3I | CTNAG | 2 cut(s) | 25, 231 |
| Hsp92I | GRCGYC | 1 cut(s) | 267 |
| Hsp92II | CATG | 2 cut(s) | 191, 260 |
| LmnI | GCTCC | 1 cut(s) | 121 |
| LpnPI | CCDG | 8 cut(s) | 37, 90, 99, 111, 174, 192, 258, 293 |
| Lsp1109I | GCAGC | 1 cut(s) | 125 |
| LweI | GCATC | 1 cut(s) | 320 |
| MaeI | CTAG | 2 cut(s) | 56, 198 |
| MaeIII | GTNAC | 1 cut(s) | 268 |
| MluCI | AATT | 3 cut(s) | 34, 81, 173 |
| MnlI | CCTC | 1 cut(s) | 237 |
| Mph1103I | ATGCAT | 1 cut(s) | 313 |
| MroXI | GAANNNNTTC | 1 cut(s) | 69 |
| MseI | TTAA | 2 cut(s) | 171, 183 |
| MspI | CCGG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 317 |
| NheI | GCTAGC | 1 cut(s) | 55 |
| NlaIII | CATG | 2 cut(s) | 191, 260 |
| NmuCI | GTSAC | 1 cut(s) | 268 |
| NsiI | ATGCAT | 1 cut(s) | 313 |
| NspI | RCATGY | 1 cut(s) | 191 |
| PdmI | GAANNNNTTC | 1 cut(s) | 69 |
| PfeI | GAWTC | 3 cut(s) | 44, 276, 327 |
| PinAI | ACCGGT | 1 cut(s) | 178 |
| PkrI | GCNGC | 1 cut(s) | 115 |
| PsiI | TTATAA | 1 cut(s) | 33 |
| RsaI | GTAC | 1 cut(s) | 108 |
| RsaNI | GTAC | 1 cut(s) | 107 |
| SaqAI | TTAA | 2 cut(s) | 171, 183 |
| SatI | GCNGC | 1 cut(s) | 114 |
| ScaI | AGTACT | 1 cut(s) | 108 |
| SetI | ASST | 8 cut(s) | 70, 79, 100, 118, 171, 207, 213, 237 |
| SfaNI | GCATC | 1 cut(s) | 320 |
| SfcI | CTRYAG | 1 cut(s) | 99 |
| Sse9I | AATT | 3 cut(s) | 34, 81, 173 |
| SspMI | CTAG | 2 cut(s) | 56, 198 |
| TasI | AATT | 3 cut(s) | 34, 81, 173 |
| TatI | WGTACW | 1 cut(s) | 106 |
| TfiI | GAWTC | 3 cut(s) | 44, 276, 327 |
| Tru1I | TTAA | 2 cut(s) | 171, 183 |
| Tru9I | TTAA | 2 cut(s) | 171, 183 |
| TscAI | CASTG | 2 cut(s) | 56, 235 |
| TseFI | GTSAC | 1 cut(s) | 268 |
| TseI | GCWGC | 1 cut(s) | 113 |
| Tsp45I | GTSAC | 1 cut(s) | 268 |
| TspDTI | ATGAA | 1 cut(s) | 273 |
| TspRI | CASTG | 2 cut(s) | 56, 235 |
| XbaI | TCTAGA | 1 cut(s) | 197 |
| XceI | RCATGY | 1 cut(s) | 191 |
| XmnI | GAANNNNTTC | 1 cut(s) | 69 |
| XspI | CTAG | 2 cut(s) | 56, 198 |
| ZrmI | AGTACT | 1 cut(s) | 108 |
| Zsp2I | ATGCAT | 1 cut(s) | 313 |