Rh7AG461100

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
63417583 .. 63417939
357 bp
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UTR
Exon/CDS
Intron
Rh7AG461100.1

Sequence Viewer

Length: 357 bp
ATGACTTTGGCTTTTGCTCTTATCATTTTGGTGTTGATTACAAATTTATACAATCACATACAAACATCAAACATGATTACGAATACATTAATTTGTTTTTGGTTTTGGTTTTTGCAGGAGAGAGTGGTAAAGTGTGTAAATGTGATTCAAGATGCTGGATTAATGAGTGGGGCCTTCAAGAATGGTAGTGGTTCAGTGCAGTCTGTGCCACAAAGCCCCATTGGGGTGTTGGATGTTGCATGCTTCAGCTATAAAAGTGATGATCACACCACAGTTGGGTCATGTGCAAATTCTTTTCATAATGGCTCAGACACCAAAAGAAGGAAGCTAAACAGACCCTATGAAGTGGAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.15

Weight (kDa)

7.69

Isoelectric Point (pI)

44.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029469)

Species Orthologous Gene IDs
pyrus_communis pycom15g34190
rosa_samantha Rh7AG461100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 43, 289
AcuI CTGAAG 1 cut(s) 229
AfiI CCNNNNNNNGG 3 cut(s) 223, 276, 321
AgsI TTSAA 2 cut(s) 149, 178
AluBI AGCT 2 cut(s) 249, 328
AluI AGCT 2 cut(s) 249, 328
AoxI GGCC 1 cut(s) 171
ApoI RAATTY 2 cut(s) 43, 289
AseI ATTAAT 2 cut(s) 89, 161
AspS9I GGNCC 1 cut(s) 171
BclI TGATCA 1 cut(s) 262
BmgT120I GGNCC 1 cut(s) 171
BmiI GGNNCC 1 cut(s) 172
BmsI GCATC 1 cut(s) 142
Bsc4I CCNNNNNNNGG 3 cut(s) 223, 276, 321
BseGI GGATG 1 cut(s) 238
BseLI CCNNNNNNNGG 3 cut(s) 223, 276, 321
BseMII CTCAG 1 cut(s) 321
BsgI GTGCAG 1 cut(s) 218
BshFI GGCC 1 cut(s) 173
BslI CCNNNNNNNGG 3 cut(s) 223, 276, 321
BsnI GGCC 1 cut(s) 173
Bsp143I GATC 1 cut(s) 262
BspANI GGCC 1 cut(s) 173
BspCNI CTCAG 1 cut(s) 320
BspLI GGNNCC 1 cut(s) 172
BssMI GATC 1 cut(s) 262
Bst4CI ACNGT 1 cut(s) 274
BstAPI GCANNNNNTGC 1 cut(s) 205
BstC8I GCNNGC 1 cut(s) 241
BstDEI CTNAG 1 cut(s) 307
BstF5I GGATG 1 cut(s) 238
BstKTI GATC 1 cut(s) 265
BstMBI GATC 1 cut(s) 262
BstMWI GCNNNNNNNGC 1 cut(s) 205
BstNSI RCATGY 1 cut(s) 243
BsuRI GGCC 1 cut(s) 173
BtsCI GGATG 1 cut(s) 238
BtsIMutI CAGTG 1 cut(s) 201
Cac8I GCNNGC 1 cut(s) 241
Cfr13I GGNCC 1 cut(s) 171
CviAII CATG 3 cut(s) 73, 240, 282
CviJI RGCY 6 cut(s) 11, 173, 216, 249, 306, 328
CviKI_1 RGCY 6 cut(s) 11, 173, 216, 249, 306, 328
DdeI CTNAG 1 cut(s) 307
DpnI GATC 1 cut(s) 264
DpnII GATC 1 cut(s) 262
Eco57I CTGAAG 1 cut(s) 229
EcoO109I RGGNCCY 1 cut(s) 171
FaeI CATG 3 cut(s) 76, 243, 285
FaiI YATR 9 cut(s) 49, 59, 74, 241, 252, 283, 300, 342, 355
FatI CATG 3 cut(s) 72, 239, 281
FbaI TGATCA 1 cut(s) 262
FokI GGATG 1 cut(s) 245
HaeIII GGCC 1 cut(s) 173
Hin1II CATG 3 cut(s) 76, 243, 285
HinfI GANTC 1 cut(s) 145
Hpy188I TCNGA 1 cut(s) 310
Hpy188III TCNNGA 2 cut(s) 149, 178
HpyAV CCTTC 2 cut(s) 184, 315
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4V TGCA 4 cut(s) 115, 199, 239, 287
HpyF10VI GCNNNNNNNGC 1 cut(s) 205
HpyF3I CTNAG 1 cut(s) 307
Hsp92II CATG 3 cut(s) 76, 243, 285
Ksp22I TGATCA 1 cut(s) 262
Kzo9I GATC 1 cut(s) 262
LpnPI CCDG 2 cut(s) 101, 141
LweI GCATC 1 cut(s) 142
MalI GATC 1 cut(s) 264
MboI GATC 1 cut(s) 262
MluCI AATT 3 cut(s) 43, 90, 289
MmeI TCCRAC 1 cut(s) 210
MseI TTAA 2 cut(s) 89, 161
MslI CAYNNNNRTG 2 cut(s) 29, 224
MwoI GCNNNNNNNGC 1 cut(s) 205
NdeII GATC 1 cut(s) 262
NlaIII CATG 3 cut(s) 76, 243, 285
NlaIV GGNNCC 1 cut(s) 172
NspI RCATGY 1 cut(s) 243
PaeI GCATGC 1 cut(s) 243
PfeI GAWTC 1 cut(s) 145
PshBI ATTAAT 2 cut(s) 89, 161
PspN4I GGNNCC 1 cut(s) 172
PspPI GGNCC 1 cut(s) 171
RseI CAYNNNNRTG 2 cut(s) 29, 224
SaqAI TTAA 2 cut(s) 89, 161
Sau3AI GATC 1 cut(s) 262
Sau96I GGNCC 1 cut(s) 171
SetI ASST 2 cut(s) 251, 330
SfaNI GCATC 1 cut(s) 142
SgeI CNNG 7 cut(s) 85, 128, 161, 168, 190, 252, 294
SmiMI CAYNNNNRTG 2 cut(s) 29, 224
SphI GCATGC 1 cut(s) 243
Sse9I AATT 3 cut(s) 43, 90, 289
TaaI ACNGT 1 cut(s) 274
TasI AATT 3 cut(s) 43, 90, 289
TfiI GAWTC 1 cut(s) 145
Tru1I TTAA 2 cut(s) 89, 161
Tru9I TTAA 2 cut(s) 89, 161
TscAI CASTG 1 cut(s) 201
TspDTI ATGAA 2 cut(s) 287, 357
TspRI CASTG 1 cut(s) 201
VspI ATTAAT 2 cut(s) 89, 161
XapI RAATTY 2 cut(s) 43, 289
XceI RCATGY 1 cut(s) 243
XcmI CCANNNNNNNNNTGG 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.