Elongation factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr7g0230231 |
| rosa_samantha | Rh7AG409700 Rh7BG389100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 170 |
| Acc36I | ACCTGC | 1 cut(s) | 170 |
| AcsI | RAATTY | 1 cut(s) | 97 |
| AfaI | GTAC | 1 cut(s) | 68 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 88, 153, 154 |
| AflIII | ACRYGT | 1 cut(s) | 231 |
| AgsI | TTSAA | 1 cut(s) | 86 |
| AjiI | CACGTC | 1 cut(s) | 232 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 71, 103 |
| AluBI | AGCT | 1 cut(s) | 166 |
| AluI | AGCT | 1 cut(s) | 166 |
| Alw26I | GTCTC | 1 cut(s) | 9 |
| ApeKI | GCWGC | 1 cut(s) | 59 |
| ApoI | RAATTY | 1 cut(s) | 97 |
| AsuC2I | CCSGG | 1 cut(s) | 216 |
| AsuHPI | GGTGA | 2 cut(s) | 103, 173 |
| BbsI | GAAGAC | 1 cut(s) | 32 |
| BbvI | GCAGC | 1 cut(s) | 46 |
| BccI | CCATC | 1 cut(s) | 100 |
| BcnI | CCSGG | 1 cut(s) | 216 |
| BcoDI | GTCTC | 1 cut(s) | 9 |
| BfuAI | ACCTGC | 1 cut(s) | 170 |
| BisI | GCNGC | 1 cut(s) | 60 |
| BlsI | GCNGC | 1 cut(s) | 61 |
| Bme1390I | CCNGG | 1 cut(s) | 216 |
| BmgBI | CACGTC | 1 cut(s) | 232 |
| BmrFI | CCNGG | 1 cut(s) | 216 |
| BpiI | GAAGAC | 1 cut(s) | 32 |
| BpuMI | CCSGG | 1 cut(s) | 216 |
| BsaAI | YACGTR | 1 cut(s) | 53 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 88, 153, 154 |
| BseGI | GGATG | 1 cut(s) | 117 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 88, 153, 154 |
| BseXI | GCAGC | 1 cut(s) | 46 |
| BsiSI | CCGG | 1 cut(s) | 215 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 88, 153, 154 |
| BsmAI | GTCTC | 1 cut(s) | 9 |
| BspMI | ACCTGC | 1 cut(s) | 170 |
| Bst4CI | ACNGT | 1 cut(s) | 71 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 56 |
| BstBAI | YACGTR | 1 cut(s) | 53 |
| BstF5I | GGATG | 1 cut(s) | 117 |
| BstMAI | GTCTC | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 56 |
| BstSCI | CCNGG | 1 cut(s) | 214 |
| BstV1I | GCAGC | 1 cut(s) | 46 |
| BstV2I | GAAGAC | 1 cut(s) | 32 |
| BtrI | CACGTC | 1 cut(s) | 232 |
| BtsCI | GGATG | 1 cut(s) | 117 |
| BtsIMutI | CAGTG | 1 cut(s) | 76 |
| BveI | ACCTGC | 1 cut(s) | 170 |
| Csp6I | GTAC | 1 cut(s) | 67 |
| CviAII | CATG | 1 cut(s) | 17 |
| CviJI | RGCY | 2 cut(s) | 166, 224 |
| CviKI_1 | RGCY | 2 cut(s) | 166, 224 |
| CviQI | GTAC | 1 cut(s) | 67 |
| FaeI | CATG | 1 cut(s) | 20 |
| FaiI | YATR | 3 cut(s) | 18, 194, 203 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 150, 182 |
| FatI | CATG | 1 cut(s) | 16 |
| Fnu4HI | GCNGC | 1 cut(s) | 60 |
| FokI | GGATG | 1 cut(s) | 124 |
| Fsp4HI | GCNGC | 1 cut(s) | 60 |
| GluI | GCNGC | 1 cut(s) | 60 |
| HapII | CCGG | 1 cut(s) | 215 |
| Hin1II | CATG | 1 cut(s) | 20 |
| HpaII | CCGG | 1 cut(s) | 215 |
| HphI | GGTGA | 2 cut(s) | 103, 173 |
| Hpy166II | GTNNAC | 1 cut(s) | 79 |
| Hpy8I | GTNNAC | 1 cut(s) | 79 |
| HpyAV | CCTTC | 1 cut(s) | 152 |
| HpyCH4III | ACNGT | 1 cut(s) | 71 |
| HpyCH4IV | ACGT | 2 cut(s) | 52, 231 |
| HpyCH4V | TGCA | 3 cut(s) | 16, 45, 179 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 56 |
| HpySE526I | ACGT | 2 cut(s) | 52, 231 |
| Hsp92II | CATG | 1 cut(s) | 20 |
| LpnPI | CCDG | 2 cut(s) | 165, 228 |
| Lsp1109I | GCAGC | 1 cut(s) | 46 |
| MaeII | ACGT | 2 cut(s) | 52, 231 |
| MboII | GAAGA | 2 cut(s) | 37, 106 |
| MluCI | AATT | 4 cut(s) | 86, 97, 130, 140 |
| MspI | CCGG | 1 cut(s) | 215 |
| MspR9I | CCNGG | 1 cut(s) | 216 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 56 |
| NciI | CCSGG | 1 cut(s) | 216 |
| NlaIII | CATG | 1 cut(s) | 20 |
| NmeAIII | GCCGAG | 1 cut(s) | 88 |
| PaqCI | CACCTGC | 1 cut(s) | 170 |
| PkrI | GCNGC | 1 cut(s) | 61 |
| Ppu21I | YACGTR | 1 cut(s) | 53 |
| RsaI | GTAC | 1 cut(s) | 68 |
| RsaNI | GTAC | 1 cut(s) | 67 |
| SatI | GCNGC | 1 cut(s) | 60 |
| ScrFI | CCNGG | 1 cut(s) | 216 |
| SetI | ASST | 6 cut(s) | 55, 84, 163, 168, 184, 234 |
| SgeI | CNNG | 9 cut(s) | 20, 29, 58, 63, 76, 95, 192, 227, 228 |
| Sse9I | AATT | 4 cut(s) | 86, 97, 130, 140 |
| StyD4I | CCNGG | 1 cut(s) | 214 |
| TaaI | ACNGT | 1 cut(s) | 71 |
| TaiI | ACGT | 2 cut(s) | 55, 234 |
| TasI | AATT | 4 cut(s) | 86, 97, 130, 140 |
| TatI | WGTACW | 1 cut(s) | 66 |
| TscAI | CASTG | 1 cut(s) | 76 |
| TseI | GCWGC | 1 cut(s) | 59 |
| TspRI | CASTG | 1 cut(s) | 76 |
| XapI | RAATTY | 1 cut(s) | 97 |