Rh7CG344600
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
38856637 .. 38857661
1025 bp
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UTR
Exon/CDS
Intron
Rh7CG344600.1

Sequence Viewer

Length: 300 bp
ATGGTTTGTGAAGTAAAAGTGGATGAGACATATTCACCTACCACAGTTGCAACATCAAACAACTCTGAGAGAAGCTCAATCAGGACAAGGGGCTCCGGTTCACCCTTGAACTGCATATCAAGTTTGGTTCAGCAAATGAATATGGACAATGATCAGGAATTGTCTACAGCCATGCTTCGGATTGAGGCACTGGATGCCGGTTGGCAAAAGGAGGAACTAGAGGCACCCATTCACTTTTCTTTTAAGCATTTCATATGGCTGCAATTCTCACTTGATTCATTTTCTTTTGGTATCATCTAG

Protein Analysis

99

Amino Acids

11.16

Weight (kDa)

4.66

Isoelectric Point (pI)

44.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0023057)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0000953.1_g000001
rosa_roxburghii Rroxscaffold_3G00240080
rosa_samantha Rh7AG327300 Rh7CG344600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 223
AccI GTMKAC 1 cut(s) 164
AfiI CCNNNNNNNGG 1 cut(s) 177
AgsI TTSAA 1 cut(s) 109
AluBI AGCT 1 cut(s) 75
AluI AGCT 1 cut(s) 75
Alw26I GTCTC 1 cut(s) 20
ApeKI GCWGC 1 cut(s) 259
AsuHPI GGTGA 2 cut(s) 27, 93
BanI GGYRCC 1 cut(s) 223
BanII GRGCYC 1 cut(s) 95
BbvI GCAGC 1 cut(s) 246
BclI TGATCA 1 cut(s) 151
BcoDI GTCTC 1 cut(s) 20
BfaI CTAG 2 cut(s) 218, 298
BfmI CTRYAG 1 cut(s) 165
BisI GCNGC 1 cut(s) 260
BlsI GCNGC 1 cut(s) 261
BmiI GGNNCC 2 cut(s) 94, 225
BmsI GCATC 1 cut(s) 184
BplI GAGNNNNNCTC 2 cut(s) 59, 91
BsaWI WCCGGW 1 cut(s) 95
Bsc4I CCNNNNNNNGG 1 cut(s) 177
Bse118I RCCGGY 1 cut(s) 197
Bse1I ACTGG 1 cut(s) 195
BseGI GGATG 2 cut(s) 28, 199
BseLI CCNNNNNNNGG 1 cut(s) 177
BseMII CTCAG 1 cut(s) 57
BseNI ACTGG 1 cut(s) 195
BseXI GCAGC 1 cut(s) 246
BshNI GGYRCC 1 cut(s) 223
BsiSI CCGG 2 cut(s) 96, 198
BslI CCNNNNNNNGG 1 cut(s) 177
BsmAI GTCTC 1 cut(s) 20
Bsp1286I GDGCHC 1 cut(s) 95
Bsp143I GATC 1 cut(s) 151
BspCNI CTCAG 1 cut(s) 58
BspLI GGNNCC 2 cut(s) 94, 225
BspT107I GGYRCC 1 cut(s) 223
BsrFI RCCGGY 1 cut(s) 197
BsrI ACTGG 1 cut(s) 195
BssAI RCCGGY 1 cut(s) 197
BssMI GATC 1 cut(s) 151
Bst4CI ACNGT 1 cut(s) 46
BstAPI GCANNNNNTGC 1 cut(s) 194
BstDEI CTNAG 1 cut(s) 66
BstF5I GGATG 2 cut(s) 28, 199
BstKTI GATC 1 cut(s) 154
BstMAI GTCTC 1 cut(s) 20
BstMBI GATC 1 cut(s) 151
BstMWI GCNNNNNNNGC 1 cut(s) 194
BstSFI CTRYAG 1 cut(s) 165
BstV1I GCAGC 1 cut(s) 246
BtsCI GGATG 2 cut(s) 28, 199
BtsIMutI CAGTG 1 cut(s) 188
Cfr10I RCCGGY 1 cut(s) 197
CviAII CATG 1 cut(s) 172
CviJI RGCY 4 cut(s) 75, 93, 170, 259
CviKI_1 RGCY 4 cut(s) 75, 93, 170, 259
DdeI CTNAG 1 cut(s) 66
DpnI GATC 1 cut(s) 153
DpnII GATC 1 cut(s) 151
Eco24I GRGCYC 1 cut(s) 95
EcoT38I GRGCYC 1 cut(s) 95
FaeI CATG 1 cut(s) 175
FaiI YATR 6 cut(s) 31, 116, 143, 173, 254, 256
FatI CATG 1 cut(s) 171
FauNDI CATATG 1 cut(s) 254
FbaI TGATCA 1 cut(s) 151
FblI GTMKAC 1 cut(s) 164
Fnu4HI GCNGC 1 cut(s) 260
FokI GGATG 2 cut(s) 35, 206
FriOI GRGCYC 1 cut(s) 95
Fsp4HI GCNGC 1 cut(s) 260
FspBI CTAG 2 cut(s) 218, 298
GluI GCNGC 1 cut(s) 260
HapII CCGG 2 cut(s) 96, 198
Hin1II CATG 1 cut(s) 175
HinfI GANTC 1 cut(s) 275
HpaII CCGG 2 cut(s) 96, 198
HphI GGTGA 2 cut(s) 27, 93
Hpy166II GTNNAC 2 cut(s) 101, 165
Hpy188I TCNGA 2 cut(s) 67, 180
Hpy188III TCNNGA 2 cut(s) 82, 155
Hpy8I GTNNAC 2 cut(s) 101, 165
HpyCH4III ACNGT 1 cut(s) 46
HpyCH4V TGCA 3 cut(s) 50, 114, 262
HpyF10VI GCNNNNNNNGC 1 cut(s) 194
HpyF3I CTNAG 1 cut(s) 66
Hsp92II CATG 1 cut(s) 175
Ksp22I TGATCA 1 cut(s) 151
Kzo9I GATC 1 cut(s) 151
LmnI GCTCC 1 cut(s) 98
LpnPI CCDG 5 cut(s) 67, 109, 140, 176, 211
Lsp1109I GCAGC 1 cut(s) 246
LweI GCATC 1 cut(s) 184
MaeI CTAG 2 cut(s) 218, 298
MalI GATC 1 cut(s) 153
MboI GATC 1 cut(s) 151
MhlI GDGCHC 1 cut(s) 95
MluCI AATT 2 cut(s) 158, 263
MnlI CCTC 3 cut(s) 178, 205, 214
MseI TTAA 1 cut(s) 243
MspI CCGG 2 cut(s) 96, 198
MwoI GCNNNNNNNGC 1 cut(s) 194
NdeI CATATG 1 cut(s) 254
NdeII GATC 1 cut(s) 151
NlaIII CATG 1 cut(s) 175
NlaIV GGNNCC 2 cut(s) 94, 225
PfeI GAWTC 1 cut(s) 275
PkrI GCNGC 1 cut(s) 261
PspN4I GGNNCC 2 cut(s) 94, 225
SaqAI TTAA 1 cut(s) 243
SatI GCNGC 1 cut(s) 260
Sau3AI GATC 1 cut(s) 151
SduI GDGCHC 1 cut(s) 95
SetI ASST 2 cut(s) 40, 77
SfaNI GCATC 1 cut(s) 184
SfcI CTRYAG 1 cut(s) 165
Sse9I AATT 2 cut(s) 158, 263
SspMI CTAG 2 cut(s) 218, 298
TaaI ACNGT 1 cut(s) 46
TasI AATT 2 cut(s) 158, 263
TfiI GAWTC 1 cut(s) 275
Tru1I TTAA 1 cut(s) 243
Tru9I TTAA 1 cut(s) 243
TscAI CASTG 1 cut(s) 195
TseI GCWGC 1 cut(s) 259
TspDTI ATGAA 3 cut(s) 152, 241, 267
TspRI CASTG 1 cut(s) 195
XmiI GTMKAC 1 cut(s) 164
XspI CTAG 2 cut(s) 218, 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.