Rh7CG472700

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
63436821 .. 63437168
348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG472700.1

Sequence Viewer

Length: 348 bp
ATGAGGGGAAAATATATTAGCTTCGAAGACTTGTTGAGGTATAGTATGGGTTTGGGTTTCTTTGGAAAGGACTTCAAAGTGGAAAAAGCAAGAGATGTGTTGCATTCACGGATCTCAAAGCTTAAAGATTTTTGTCTACTGACTGATAGCAGCGATAATAGATGTGTAAGAATGCTTGACCATGTACGTGATGTTGCGAAGCAGATTGCATTAAGAGATCAACACATCTTATCATTAGCGGAAGATGGTCACCTCCATGAGTTGAAAGAATGGACAGATCAGTATTTCTTAGAGAAGTGCACAATCATGTTTTTCCCATCTAGCAACAATATCCCAAGGCTTCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

13.54

Weight (kDa)

7.76

Isoelectric Point (pI)

30.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0033261)

Species Orthologous Gene IDs
rosa_samantha Rh7CG472700 Rh7DG441700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 136
AciI CCGC 1 cut(s) 239
AclWI GGATC 1 cut(s) 119
AfaI GTAC 1 cut(s) 186
AgsI TTSAA 2 cut(s) 76, 265
AluBI AGCT 2 cut(s) 21, 121
AluI AGCT 2 cut(s) 21, 121
Alw21I GWGCWC 1 cut(s) 302
Alw44I GTGCAC 1 cut(s) 298
AlwI GGATC 1 cut(s) 119
ApaLI GTGCAC 1 cut(s) 298
ApeKI GCWGC 1 cut(s) 150
AsuHPI GGTGA 1 cut(s) 242
AsuII TTCGAA 1 cut(s) 24
BaeGI GKGCMC 1 cut(s) 302
BbsI GAAGAC 1 cut(s) 33
Bbv12I GWGCWC 1 cut(s) 302
BbvI GCAGC 1 cut(s) 162
BccI CCATC 2 cut(s) 239, 325
BfaI CTAG 1 cut(s) 321
BisI GCNGC 1 cut(s) 151
BlsI GCNGC 1 cut(s) 152
BpiI GAAGAC 1 cut(s) 33
Bpu14I TTCGAA 1 cut(s) 24
BsaAI YACGTR 1 cut(s) 188
BsaJI CCNNGG 1 cut(s) 335
BseDI CCNNGG 1 cut(s) 335
BseSI GKGCMC 1 cut(s) 302
BseXI GCAGC 1 cut(s) 162
BsiHKAI GWGCWC 1 cut(s) 302
BsmI GAATGC 2 cut(s) 103, 177
Bsp119I TTCGAA 1 cut(s) 24
Bsp1286I GDGCHC 1 cut(s) 302
Bsp143I GATC 3 cut(s) 111, 217, 277
BspACI CCGC 1 cut(s) 239
BspPI GGATC 1 cut(s) 119
BspT104I TTCGAA 1 cut(s) 24
BssECI CCNNGG 1 cut(s) 335
BssMI GATC 3 cut(s) 111, 217, 277
BssT1I CCWWGG 1 cut(s) 335
BstBAI YACGTR 1 cut(s) 188
BstBI TTCGAA 1 cut(s) 24
BstDEI CTNAG 1 cut(s) 289
BstEII GGTNACC 1 cut(s) 248
BstKTI GATC 3 cut(s) 114, 220, 280
BstMBI GATC 3 cut(s) 111, 217, 277
BstPI GGTNACC 1 cut(s) 248
BstSLI GKGCMC 1 cut(s) 302
BstV1I GCAGC 1 cut(s) 162
BstV2I GAAGAC 1 cut(s) 33
BstX2I RGATCY 1 cut(s) 111
BstYI RGATCY 1 cut(s) 111
Csp6I GTAC 1 cut(s) 185
CviAII CATG 3 cut(s) 182, 257, 307
CviJI RGCY 3 cut(s) 21, 121, 340
CviKI_1 RGCY 3 cut(s) 21, 121, 340
CviQI GTAC 1 cut(s) 185
DdeI CTNAG 1 cut(s) 289
DpnI GATC 3 cut(s) 113, 219, 279
DpnII GATC 3 cut(s) 111, 217, 277
Eco130I CCWWGG 1 cut(s) 335
Eco91I GGTNACC 1 cut(s) 248
EcoO65I GGTNACC 1 cut(s) 248
EcoT14I CCWWGG 1 cut(s) 335
ErhI CCWWGG 1 cut(s) 335
FaeI CATG 3 cut(s) 185, 260, 310
FaiI YATR 6 cut(s) 15, 42, 47, 183, 258, 308
FatI CATG 3 cut(s) 181, 256, 306
FblI GTMKAC 1 cut(s) 136
Fnu4HI GCNGC 1 cut(s) 151
Fsp4HI GCNGC 1 cut(s) 151
FspBI CTAG 1 cut(s) 321
GluI GCNGC 1 cut(s) 151
Hin1II CATG 3 cut(s) 185, 260, 310
HindIII AAGCTT 1 cut(s) 119
HphI GGTGA 1 cut(s) 242
Hpy166II GTNNAC 2 cut(s) 137, 300
Hpy8I GTNNAC 2 cut(s) 137, 300
HpyCH4IV ACGT 1 cut(s) 187
HpyCH4V TGCA 3 cut(s) 103, 209, 300
HpyF3I CTNAG 1 cut(s) 289
HpySE526I ACGT 1 cut(s) 187
Hsp92II CATG 3 cut(s) 185, 260, 310
Kzo9I GATC 3 cut(s) 111, 217, 277
Lsp1109I GCAGC 1 cut(s) 162
MaeI CTAG 1 cut(s) 321
MaeII ACGT 1 cut(s) 187
MaeIII GTNAC 1 cut(s) 248
MalI GATC 3 cut(s) 113, 219, 279
MboI GATC 3 cut(s) 111, 217, 277
MboII GAAGA 2 cut(s) 38, 254
MflI RGATCY 1 cut(s) 111
MhlI GDGCHC 1 cut(s) 302
MnlI CCTC 2 cut(s) 30, 263
MseI TTAA 2 cut(s) 123, 212
MslI CAYNNNNRTG 3 cut(s) 186, 255, 305
Mva1269I GAATGC 2 cut(s) 103, 177
NdeII GATC 3 cut(s) 111, 217, 277
NlaIII CATG 3 cut(s) 185, 260, 310
NmuCI GTSAC 1 cut(s) 248
NspV TTCGAA 1 cut(s) 24
PctI GAATGC 2 cut(s) 103, 177
PkrI GCNGC 1 cut(s) 152
Ppu21I YACGTR 1 cut(s) 188
PspEI GGTNACC 1 cut(s) 248
PsuI RGATCY 1 cut(s) 111
RsaI GTAC 1 cut(s) 186
RsaNI GTAC 1 cut(s) 185
RseI CAYNNNNRTG 3 cut(s) 186, 255, 305
SaqAI TTAA 2 cut(s) 123, 212
SatI GCNGC 1 cut(s) 151
Sau3AI GATC 3 cut(s) 111, 217, 277
SduI GDGCHC 1 cut(s) 302
SetI ASST 5 cut(s) 23, 41, 123, 190, 255
SfuI TTCGAA 1 cut(s) 24
SgeI CNNG 9 cut(s) 43, 102, 120, 188, 194, 200, 269, 319, 333
SmiMI CAYNNNNRTG 3 cut(s) 186, 255, 305
SsiI CCGC 1 cut(s) 239
SspMI CTAG 1 cut(s) 321
StyI CCWWGG 1 cut(s) 335
TaiI ACGT 1 cut(s) 190
TaqI TCGA 1 cut(s) 24
Tru1I TTAA 2 cut(s) 123, 212
Tru9I TTAA 2 cut(s) 123, 212
TseFI GTSAC 1 cut(s) 248
TseI GCWGC 1 cut(s) 150
Tsp45I GTSAC 1 cut(s) 248
TspGWI ACGGA 1 cut(s) 124
VneI GTGCAC 1 cut(s) 298
XmiI GTMKAC 1 cut(s) 136
XspI CTAG 1 cut(s) 321
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.