Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0026180

Physical Location & Seq

Genomic Coordinates Forward (+)

40737873 .. 40741686

Gene Structure 3814 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG332400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1422 bp

ATGGCGTGCTCCGCTCAAATCAACGTCCTGGGCACTCCCCCGGGTGCATCACTCCCAAGGACGCTGTTTTTAGGTCAGAGATTGGGACAAGCGGCGCCGTTGCGGGGCTTCGTCACCCTACGATCCAACGGCACTGCTCGAAGGGCGGGACCGCTCCGCATAGTAAACGAGAAAGTTGTGGGGATCGATTTGGGGACGACTAACTCGGCCGTTGGTGCTATGGAGGGTGGTAAGCCCACCATAGTGACCAATGCTGAGGGCCAGAGAACCACGCCGTCCGTCGTCGCTTACACGAAGAGCGGCGATAGGCTCGTCGGTCAGATCGCAAAACGACAGGCCGTTGTGAACCCGGAGAACACCTTCTTTTCGGTGAAGAGGTTTATTGGGAGGAAGATGTCTGAGGTTGACGAAGAGTCTAAGCAGGTCTCCTACAAGGTTGTTAGGGATGAGAATGGGAATGTTAAGCTTGATTGTCCTGCTATTGGCAAACAGTTCGCCGCCGAAGAAATCTCTGCTCAGAGGATTGTGGATTGGCTTGCTGCGGAATTCAAAAGAGATGAAGGAATAGATCTATTGAAGGATAAACAAGCCCTTCAGCGGCTGACAGAGACAGCTGAGAAGGCCAAAATGGAGTTGTCATCTTTAACGCAGACAAATTTAAGCTTGCCTTTCATTACTGCGACTGCAGATGGCCCCAAGCACATTGAGACAACACTTACAAGGGTCAAGTTTGAGGAGCTGTGCTCTGATCTCCTTGACAGACTTAAAACACCAGTTGAAACTTCGTTGAGGGATGCAAAACTCTCCTTTAAAGATCTAGATGAGGTAATACTTGTTGGTGGCTCAACCCGTATACCAGCTGTTCAGGAGCTTGTGAGGAAGTTAACCGGAAAGGAACCAAATGTTACAGTCAATCCTGATGAAGTTGTTGCCCTTGGGGCTGCAGTTCAGGCTGGTGTATTAGCTGGAGATGACATCACCATTACCGGTGCGAGCACATTGCCCAATGATGAGGTACAAAGAATGGTTAATGAAGCAGAGAAGTTTGCAAAGGAGGACAAGGAGAAGAGAGATGCCATTGACACAAAGAACCAGGCAGATTCCGTTGTCTACCAGACTGAGAAGCAGCTTAAGGAACTGGGAGACAAGGTTCCAGCCCCAGTTAAAGAGAAGGTTGAGGCAAAACTCGGAGAACTCAAGGAAGCTATTTCTGGGGGTTCAACCCAAGCTATTAAGGATGCCATGGCTGCTCTCAACCAGGAAGTCATGCAGCTGGGACAGTCCCTTTATAACCAGCCTGGTGCCCCTGGTACAGGCCCAACAGCACCCGGTGCTGAAGCTGGGCCTTCAGAGTCGTCATCATCATCCGGCAAGGGACCTGAAGGAGATGTTATCGATGCAGATTTCACCGACAGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0006605 GO:0006810 GO:0006886 GO:0006950 GO:0008104 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009941 GO:0010035 GO:0010038 GO:0015031 GO:0015833 GO:0031967 GO:0031975 GO:0033036 GO:0033365 GO:0034613 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045184 GO:0046686 GO:0046907 GO:0048046 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072596 GO:0072598

KEGG Pathways

Metabolic & Signaling

ko03040 ko04010 ko04141 ko04144 ko04213 ko04612 ko04915 ko05134 ko05145 ko05162 ko05164 ko05169 map03040 map04010 map04141 map04144 map04213 map04612 map04915 map05134 map05145 map05162 map05164 map05169

Pfam Domains

Protein Families

HSP70

Protein Analysis

473

Amino Acids

50.5

Weight (kDa)

5.31

Isoelectric Point (pI)

30.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	59 - 173	2.4e-42	Hsp70 protein
HSP70	PF00012	173 - 324	5.1e-62	Hsp70 protein
HSP70	PF00012	325 - 430	1.9e-20	Hsp70 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0026180)

Species	Orthologous Gene IDs
rosa_samantha	Rh1AG158600 Rh7BG327200 Rh7DG332400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1290
Acc36I	ACCTGC	1 cut(s)	412
AccB1I	GGYRCC	2 cut(s)	94, 1301
AccBSI	CCGCTC	3 cut(s)	14, 154, 300
AccI	GTMKAC	2 cut(s)	853, 1110
AclWI	GGATC	2 cut(s)	117, 191
AcoI	YGGCCR	1 cut(s)	207
AcsI	RAATTY	2 cut(s)	545, 655
AcuI	CTGAAG	4 cut(s)	578, 1332, 1356, 1401
AcyI	GRCGYC	1 cut(s)	95
AdeI	CACNNNGTG	1 cut(s)	1331
AfaI	GTAC	2 cut(s)	1017, 1312
AfiI	CCNNNNNNNGG	4 cut(s)	104, 482, 597, 1313
AflII	CTTAAG	1 cut(s)	1130
AgeI	ACCGGT	1 cut(s)	986
AgsI	TTSAA	4 cut(s)	550, 577, 779, 1221
AhdI	GACNNNNNGTC	1 cut(s)	412
AjnI	CCWGG	5 cut(s)	27, 1092, 1257, 1297, 1306
AleI	CACNNNNGTG	1 cut(s)	242
AloI	GAACNNNNNNTCC	2 cut(s)	1134, 1166
Alw21I	GWGCWC	3 cut(s)	11, 746, 998
Alw26I	GTCTC	4 cut(s)	430, 602, 701, 1137
AlwI	GGATC	2 cut(s)	117, 191
AlwNI	CAGNNNCTG	1 cut(s)	601
Ama87I	CYCGRG	1 cut(s)	40
AoxI	GGCC	7 cut(s)	207, 259, 336, 621, 691, 1315, 1343
ApeKI	GCWGC	5 cut(s)	539, 941, 1126, 1247, 1270
ApoI	RAATTY	2 cut(s)	545, 655
AsiGI	ACCGGT	1 cut(s)	986
Asp700I	GAANNNNTTC	1 cut(s)	359
AspLEI	GCGC	1 cut(s)	97
AspS9I	GGNCC	6 cut(s)	149, 259, 692, 1316, 1343, 1376
AsuC2I	CCSGG	4 cut(s)	41, 42, 350, 1329
AsuHPI	GGTGA	4 cut(s)	106, 382, 970, 1399
AvaI	CYCGRG	1 cut(s)	40
AvaII	GGWCC	2 cut(s)	149, 1376
BaeGI	GKGCMC	2 cut(s)	35, 1306
BanI	GGYRCC	2 cut(s)	94, 1301
Bbv12I	GWGCWC	3 cut(s)	11, 746, 998
BbvCI	CCTCAGC	1 cut(s)	255
BbvI	GCAGC	5 cut(s)	526, 928, 1138, 1234, 1282
BccI	CCATC	1 cut(s)	683
BceAI	ACGGC	5 cut(s)	82, 145, 194, 259, 323
BcgI	CGANNNNNNTGC	4 cut(s)	475, 509, 982, 1016
BciT130I	CCWGG	5 cut(s)	29, 1094, 1259, 1299, 1308
BcnI	CCSGG	4 cut(s)	41, 42, 350, 1329
BcoDI	GTCTC	4 cut(s)	430, 602, 701, 1137
BfaI	CTAG	1 cut(s)	818
BfmI	CTRYAG	2 cut(s)	684, 942
BfoI	RGCGCY	1 cut(s)	98
BfrI	CTTAAG	1 cut(s)	1130
BfuAI	ACCTGC	1 cut(s)	412
BglI	GCCNNNNNGGC	1 cut(s)	938
BglII	AGATCT	2 cut(s)	568, 814
BisI	GCNGC	9 cut(s)	93, 301, 498, 540, 599, 942, 1127, 1248, 1271
BlsI	GCNGC	9 cut(s)	94, 302, 499, 541, 600, 943, 1128, 1249, 1272
Bme1390I	CCNGG	9 cut(s)	29, 41, 42, 350, 1094, 1259, 1299, 1308, 1329
Bme18I	GGWCC	2 cut(s)	149, 1376
BmeRI	GACNNNNNGTC	1 cut(s)	412
BmeT110I	CYCGRG	1 cut(s)	40
BmgT120I	GGNCC	6 cut(s)	149, 259, 692, 1316, 1343, 1376
BmiI	GGNNCC	7 cut(s)	96, 150, 694, 897, 1152, 1303, 1377
BmrFI	CCNGG	9 cut(s)	29, 41, 42, 350, 1094, 1259, 1299, 1308, 1329
BmrI	ACTGGG	2 cut(s)	1148, 1154
BmsI	GCATC	5 cut(s)	56, 784, 1063, 1228, 1387
BmuI	ACTGGG	2 cut(s)	1148, 1154
BplI	GAGNNNNNCTC	2 cut(s)	728, 760
BpmI	CTGGAG	1 cut(s)	987
Bpu10I	CCTNAGC	1 cut(s)	255
BpuEI	CTTGAG	1 cut(s)	1181
BpuMI	CCSGG	4 cut(s)	41, 42, 350, 1329
Bsa29I	ATCGAT	2 cut(s)	186, 1395
BsaHI	GRCGYC	1 cut(s)	95
BsaI	GGTCTC	1 cut(s)	430
BsaJI	CCNNGG	7 cut(s)	28, 39, 40, 56, 934, 1242, 1306
BsaWI	WCCGGW	2 cut(s)	887, 986
BsaXI	ACNNNNNCTCC	2 cut(s)	1134, 1164
Bsc4I	CCNNNNNNNGG	4 cut(s)	104, 482, 597, 1313
Bse118I	RCCGGY	1 cut(s)	986
Bse1I	ACTGG	3 cut(s)	773, 1143, 1160
Bse3DI	GCAATG	1 cut(s)	998
BseBI	CCWGG	5 cut(s)	29, 1094, 1259, 1299, 1308
BseCI	ATCGAT	2 cut(s)	186, 1395
BseDI	CCNNGG	7 cut(s)	28, 39, 40, 56, 934, 1242, 1306
BseGI	GGATG	4 cut(s)	451, 799, 1243, 1364
BseLI	CCNNNNNNNGG	4 cut(s)	104, 482, 597, 1313
BseMI	GCAATG	1 cut(s)	998
BseMII	CTCAG	5 cut(s)	246, 390, 530, 606, 1110
BseNI	ACTGG	3 cut(s)	773, 1143, 1160
BseRI	GAGGAG	1 cut(s)	749
BseSI	GKGCMC	2 cut(s)	35, 1306
BseX3I	CGGCCG	1 cut(s)	207
BseXI	GCAGC	5 cut(s)	526, 928, 1138, 1234, 1282
BseYI	CCCAGC	2 cut(s)	1273, 1340
Bsh1285I	CGRYCG	1 cut(s)	210
BshFI	GGCC	7 cut(s)	209, 261, 338, 623, 693, 1317, 1345
BshNI	GGYRCC	2 cut(s)	94, 1301
BshTI	ACCGGT	1 cut(s)	986
BshVI	ATCGAT	2 cut(s)	186, 1395
BsiEI	CGRYCG	1 cut(s)	210
BsiHKAI	GWGCWC	3 cut(s)	11, 746, 998
BsiHKCI	CYCGRG	1 cut(s)	40
BsiSI	CCGG	6 cut(s)	41, 350, 888, 987, 1329, 1368
BslFI	GGGAC	6 cut(s)	99, 162, 208, 1267, 1290, 1389
BslI	CCNNNNNNNGG	4 cut(s)	104, 482, 597, 1313
BsmAI	GTCTC	4 cut(s)	430, 602, 701, 1137
BsmFI	GGGAC	6 cut(s)	99, 162, 208, 1267, 1290, 1389
BsnI	GGCC	7 cut(s)	209, 261, 338, 623, 693, 1317, 1345
Bso31I	GGTCTC	1 cut(s)	430
BsoBI	CYCGRG	1 cut(s)	40
Bsp1286I	GDGCHC	5 cut(s)	11, 35, 746, 998, 1306
Bsp143I	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
Bsp19I	CCATGG	1 cut(s)	1242
BspANI	GGCC	7 cut(s)	209, 261, 338, 623, 693, 1317, 1345
BspCNI	CTCAG	5 cut(s)	247, 391, 529, 607, 1111
BspDI	ATCGAT	2 cut(s)	186, 1395
BspLI	GGNNCC	7 cut(s)	96, 150, 694, 897, 1152, 1303, 1377
BspMAI	CTGCAG	2 cut(s)	688, 946
BspMI	ACCTGC	1 cut(s)	412
BspPI	GGATC	2 cut(s)	117, 191
BspQI	GCTCTTC	1 cut(s)	290
BspT107I	GGYRCC	2 cut(s)	94, 1301
BspTI	CTTAAG	1 cut(s)	1130
BspTNI	GGTCTC	1 cut(s)	430
BsrBI	CCGCTC	3 cut(s)	14, 154, 300
BsrDI	GCAATG	1 cut(s)	998
BsrFI	RCCGGY	1 cut(s)	986
BsrI	ACTGG	3 cut(s)	773, 1143, 1160
BssAI	RCCGGY	1 cut(s)	986
BssECI	CCNNGG	7 cut(s)	28, 39, 40, 56, 934, 1242, 1306
BssMI	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
BssNAI	GTATAC	1 cut(s)	854
BssNI	GRCGYC	1 cut(s)	95
BssT1I	CCWWGG	3 cut(s)	56, 934, 1242
Bst1107I	GTATAC	1 cut(s)	854
Bst2UI	CCWGG	5 cut(s)	29, 1094, 1259, 1299, 1308
Bst4CI	ACNGT	3 cut(s)	492, 910, 1281
Bst6I	CTCTTC	4 cut(s)	290, 368, 405, 1061
BstACI	GRCGYC	1 cut(s)	95
BstAFI	CTTAAG	1 cut(s)	1130
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstC8I	GCNNGC	4 cut(s)	7, 537, 665, 994
BstDEI	CTNAG	6 cut(s)	255, 399, 417, 516, 615, 1119
BstDSI	CCRYGG	1 cut(s)	1242
BstENI	CCTNNNNNAGG	1 cut(s)	1311
BstF5I	GGATG	4 cut(s)	451, 799, 1243, 1364
BstH2I	RGCGCY	1 cut(s)	98
BstHHI	GCGC	1 cut(s)	97
BstKTI	GATC	6 cut(s)	125, 186, 324, 571, 751, 817
BstMAI	GTCTC	4 cut(s)	430, 602, 701, 1137
BstMBI	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
BstMCI	CGRYCG	1 cut(s)	210
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 143, 215, 620, 938, 950, 1247, 1331
BstNI	CCWGG	5 cut(s)	29, 1094, 1259, 1299, 1308
BstSCI	CCNGG	9 cut(s)	27, 39, 40, 348, 1092, 1257, 1297, 1306, 1327
BstSFI	CTRYAG	2 cut(s)	684, 942
BstSLI	GKGCMC	2 cut(s)	35, 1306
BstV1I	GCAGC	5 cut(s)	526, 928, 1138, 1234, 1282
BstX2I	RGATCY	2 cut(s)	568, 814
BstYI	RGATCY	2 cut(s)	568, 814
BstZ17I	GTATAC	1 cut(s)	854
BstZI	CGGCCG	1 cut(s)	207
Bsu15I	ATCGAT	2 cut(s)	186, 1395
BsuRI	GGCC	7 cut(s)	209, 261, 338, 623, 693, 1317, 1345
BsuTUI	ATCGAT	2 cut(s)	186, 1395
BtgI	CCRYGG	1 cut(s)	1242
BtsCI	GGATG	4 cut(s)	451, 799, 1243, 1364
BtsI	GCAGTG	1 cut(s)	132
BtsIMutI	CAGTG	1 cut(s)	132
BveI	ACCTGC	1 cut(s)	412
Cac8I	GCNNGC	4 cut(s)	7, 537, 665, 994
CaiI	CAGNNNCTG	1 cut(s)	601
CfoI	GCGC	1 cut(s)	97
Cfr10I	RCCGGY	1 cut(s)	986
Cfr13I	GGNCC	6 cut(s)	149, 259, 692, 1316, 1343, 1376
Cfr9I	CCCGGG	1 cut(s)	40
ClaI	ATCGAT	2 cut(s)	186, 1395
CseI	GACGC	1 cut(s)	70
Csp6I	GTAC	2 cut(s)	1016, 1311
CspAI	ACCGGT	1 cut(s)	986
CviAII	CATG	2 cut(s)	1243, 1267
CviQI	GTAC	2 cut(s)	1016, 1311
DdeI	CTNAG	6 cut(s)	255, 399, 417, 516, 615, 1119
DinI	GGCGCC	1 cut(s)	96
DpnI	GATC	6 cut(s)	124, 185, 323, 570, 750, 816
DpnII	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
DraI	TTTAAA	1 cut(s)	811
DraIII	CACNNNGTG	1 cut(s)	1331
DriI	GACNNNNNGTC	1 cut(s)	412
EaeI	YGGCCR	1 cut(s)	207
EagI	CGGCCG	1 cut(s)	207
Eam1104I	CTCTTC	4 cut(s)	290, 368, 405, 1061
Eam1105I	GACNNNNNGTC	1 cut(s)	412
EarI	CTCTTC	4 cut(s)	290, 368, 405, 1061
EclXI	CGGCCG	1 cut(s)	207
Eco130I	CCWWGG	3 cut(s)	56, 934, 1242
Eco31I	GGTCTC	1 cut(s)	430
Eco47I	GGWCC	2 cut(s)	149, 1376
Eco52I	CGGCCG	1 cut(s)	207
Eco57I	CTGAAG	4 cut(s)	578, 1332, 1356, 1401
Eco88I	CYCGRG	1 cut(s)	40
EcoNI	CCTNNNNNAGG	1 cut(s)	1311
EcoO109I	RGGNCCY	1 cut(s)	1376
EcoRI	GAATTC	1 cut(s)	545
EcoRII	CCWGG	5 cut(s)	27, 1092, 1257, 1297, 1306
EcoT14I	CCWWGG	3 cut(s)	56, 934, 1242
EgeI	GGCGCC	1 cut(s)	96
EheI	GGCGCC	1 cut(s)	96
ErhI	CCWWGG	3 cut(s)	56, 934, 1242
FaeI	CATG	2 cut(s)	1246, 1270
FaiI	YATR	7 cut(s)	161, 221, 242, 854, 1244, 1268, 1290
FalI	AAGNNNNNCTT	2 cut(s)	652, 684
FaqI	GGGAC	6 cut(s)	99, 162, 208, 1267, 1290, 1389
FatI	CATG	2 cut(s)	1242, 1266
FauI	CCCGC	2 cut(s)	96, 139
FblI	GTMKAC	2 cut(s)	853, 1110
Fnu4HI	GCNGC	9 cut(s)	93, 301, 498, 540, 599, 942, 1127, 1248, 1271
FokI	GGATG	4 cut(s)	458, 806, 1250, 1351
Fsp4HI	GCNGC	9 cut(s)	93, 301, 498, 540, 599, 942, 1127, 1248, 1271
FspBI	CTAG	1 cut(s)	818
GlaI	GCGC	1 cut(s)	96
GluI	GCNGC	9 cut(s)	93, 301, 498, 540, 599, 942, 1127, 1248, 1271
GsaI	CCCAGC	2 cut(s)	1277, 1344
GsuI	CTGGAG	1 cut(s)	987
HaeII	RGCGCY	1 cut(s)	98
HaeIII	GGCC	7 cut(s)	209, 261, 338, 623, 693, 1317, 1345
HapII	CCGG	6 cut(s)	41, 350, 888, 987, 1329, 1368
HgaI	GACGC	1 cut(s)	70
HhaI	GCGC	1 cut(s)	97
Hin1I	GRCGYC	1 cut(s)	95
Hin1II	CATG	2 cut(s)	1246, 1270
Hin6I	GCGC	1 cut(s)	95
HinP1I	GCGC	1 cut(s)	95
HincII	GTYRAC	2 cut(s)	406, 885
HindII	GTYRAC	2 cut(s)	406, 885
HindIII	AAGCTT	2 cut(s)	464, 661
HinfI	GANTC	3 cut(s)	413, 1100, 1352
HpaI	GTTAAC	1 cut(s)	885
HpaII	CCGG	6 cut(s)	41, 350, 888, 987, 1329, 1368
HphI	GGTGA	4 cut(s)	106, 382, 970, 1399
Hpy166II	GTNNAC	6 cut(s)	166, 346, 406, 854, 885, 1111
Hpy188I	TCNGA	7 cut(s)	78, 321, 400, 519, 748, 1190, 1351
Hpy188III	TCNNGA	3 cut(s)	818, 866, 917
Hpy8I	GTNNAC	6 cut(s)	166, 346, 406, 854, 885, 1111
Hpy99I	CGWCG	3 cut(s)	284, 287, 317
HpyAV	CCTTC	9 cut(s)	135, 370, 554, 571, 602, 613, 1165, 1356, 1376
HpyCH4III	ACNGT	3 cut(s)	492, 910, 1281
HpyCH4IV	ACGT	1 cut(s)	24
HpyCH4V	TGCA	7 cut(s)	47, 686, 797, 944, 1049, 1270, 1400
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 143, 215, 620, 938, 950, 1247, 1331
HpyF3I	CTNAG	6 cut(s)	255, 399, 417, 516, 615, 1119
HpySE526I	ACGT	1 cut(s)	24
Hsp92I	GRCGYC	1 cut(s)	95
Hsp92II	CATG	2 cut(s)	1246, 1270
HspAI	GCGC	1 cut(s)	95
KasI	GGCGCC	1 cut(s)	94
KspAI	GTTAAC	1 cut(s)	885
Kzo9I	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
LguI	GCTCTTC	1 cut(s)	290
LmnI	GCTCC	4 cut(s)	14, 159, 736, 868
Lsp1109I	GCAGC	5 cut(s)	526, 928, 1138, 1234, 1282
LweI	GCATC	5 cut(s)	56, 784, 1063, 1228, 1387
MaeI	CTAG	1 cut(s)	818
MaeII	ACGT	1 cut(s)	24
MaeIII	GTNAC	3 cut(s)	112, 244, 904
MalI	GATC	6 cut(s)	124, 185, 323, 570, 750, 816
MbiI	CCGCTC	3 cut(s)	14, 154, 300
MboI	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
MboII	GAAGA	6 cut(s)	307, 385, 403, 422, 515, 1078
MflI	RGATCY	2 cut(s)	568, 814
MhlI	GDGCHC	5 cut(s)	11, 35, 746, 998, 1306
MluCI	AATT	2 cut(s)	545, 655
Mly113I	GGCGCC	1 cut(s)	95
MlyI	GAGTC	2 cut(s)	422, 1361
MmeI	TCCRAC	1 cut(s)	150
MroXI	GAANNNNTTC	1 cut(s)	359
MslI	CAYNNNNRTG	1 cut(s)	242
MspA1I	CMGCKG	4 cut(s)	598, 614, 860, 1273
MspCI	CTTAAG	1 cut(s)	1130
MspI	CCGG	6 cut(s)	41, 350, 888, 987, 1329, 1368
MspR9I	CCNGG	9 cut(s)	29, 41, 42, 350, 1094, 1259, 1299, 1308, 1329
MvaI	CCWGG	5 cut(s)	29, 1094, 1259, 1299, 1308
MwoI	GCNNNNNNNGC	8 cut(s)	11, 143, 215, 620, 938, 950, 1247, 1331
NarI	GGCGCC	1 cut(s)	95
NciI	CCSGG	4 cut(s)	41, 42, 350, 1329
NcoI	CCATGG	1 cut(s)	1242
NdeII	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
NlaIII	CATG	2 cut(s)	1246, 1270
NlaIV	GGNNCC	7 cut(s)	96, 150, 694, 897, 1152, 1303, 1377
NmeAIII	GCCGAG	1 cut(s)	185
NmuCI	GTSAC	2 cut(s)	112, 244
OliI	CACNNNNGTG	1 cut(s)	242
PciSI	GCTCTTC	1 cut(s)	290
PdmI	GAANNNNTTC	1 cut(s)	359
PfeI	GAWTC	1 cut(s)	1100
PinAI	ACCGGT	1 cut(s)	986
PkrI	GCNGC	9 cut(s)	94, 302, 499, 541, 600, 943, 1128, 1249, 1272
PleI	GAGTC	2 cut(s)	421, 1360
PluTI	GGCGCC	1 cut(s)	98
PpsI	GAGTC	2 cut(s)	421, 1360
PpuMI	RGGWCCY	1 cut(s)	1376
PsiI	TTATAA	1 cut(s)	1290
Psp5II	RGGWCCY	1 cut(s)	1376
Psp6I	CCWGG	5 cut(s)	27, 1092, 1257, 1297, 1306
PspFI	CCCAGC	2 cut(s)	1273, 1340
PspGI	CCWGG	5 cut(s)	27, 1092, 1257, 1297, 1306
PspN4I	GGNNCC	7 cut(s)	96, 150, 694, 897, 1152, 1303, 1377
PspPI	GGNCC	6 cut(s)	149, 259, 692, 1316, 1343, 1376
PspPPI	RGGWCCY	1 cut(s)	1376
PstI	CTGCAG	2 cut(s)	688, 946
PstNI	CAGNNNCTG	1 cut(s)	601
PsuI	RGATCY	2 cut(s)	568, 814
PvuII	CAGCTG	3 cut(s)	614, 860, 1273
RsaI	GTAC	2 cut(s)	1017, 1312
RsaNI	GTAC	2 cut(s)	1016, 1311
RseI	CAYNNNNRTG	1 cut(s)	242
SapI	GCTCTTC	1 cut(s)	290
SatI	GCNGC	9 cut(s)	93, 301, 498, 540, 599, 942, 1127, 1248, 1271
Sau3AI	GATC	6 cut(s)	122, 183, 321, 568, 748, 814
Sau96I	GGNCC	6 cut(s)	149, 259, 692, 1316, 1343, 1376
SchI	GAGTC	2 cut(s)	422, 1361
ScrFI	CCNGG	9 cut(s)	29, 41, 42, 350, 1094, 1259, 1299, 1308, 1329
SduI	GDGCHC	5 cut(s)	11, 35, 746, 998, 1306
SfaNI	GCATC	5 cut(s)	56, 784, 1063, 1228, 1387
SfcI	CTRYAG	2 cut(s)	684, 942
SfoI	GGCGCC	1 cut(s)	96
SinI	GGWCC	2 cut(s)	149, 1376
SmaI	CCCGGG	1 cut(s)	42
SmiMI	CAYNNNNRTG	1 cut(s)	242
SmlI	CTYRAG	2 cut(s)	1130, 1196
SmoI	CTYRAG	2 cut(s)	1130, 1196
Sse9I	AATT	2 cut(s)	545, 655
SspDI	GGCGCC	1 cut(s)	94
SspMI	CTAG	1 cut(s)	818
StyD4I	CCNGG	9 cut(s)	27, 39, 40, 348, 1092, 1257, 1297, 1306, 1327
StyI	CCWWGG	3 cut(s)	56, 934, 1242
TaaI	ACNGT	3 cut(s)	492, 910, 1281
TaiI	ACGT	1 cut(s)	27
TaqI	TCGA	3 cut(s)	139, 186, 1395
TaqII	GACCGA	1 cut(s)	305
TasI	AATT	2 cut(s)	545, 655
TauI	GCSGC	4 cut(s)	95, 303, 500, 601
TfiI	GAWTC	1 cut(s)	1100
TscAI	CASTG	1 cut(s)	139
TseFI	GTSAC	2 cut(s)	112, 244
TseI	GCWGC	5 cut(s)	539, 941, 1126, 1247, 1270
Tsp45I	GTSAC	2 cut(s)	112, 244
TspDTI	ATGAA	4 cut(s)	573, 661, 936, 1047
TspGWI	ACGGA	2 cut(s)	268, 1093
TspMI	CCCGGG	1 cut(s)	40
TspRI	CASTG	1 cut(s)	139
Vha464I	CTTAAG	1 cut(s)	1130
VpaK11BI	GGWCC	2 cut(s)	149, 1376
XagI	CCTNNNNNAGG	1 cut(s)	1311
XapI	RAATTY	2 cut(s)	545, 655
XbaI	TCTAGA	1 cut(s)	817
XmaI	CCCGGG	1 cut(s)	40
XmiI	GTMKAC	2 cut(s)	853, 1110
XmnI	GAANNNNTTC	1 cut(s)	359
XspI	CTAG	1 cut(s)	818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.