Rh7DG384100

purine permease

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
52397562 .. 52397777
216 bp
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UTR
Exon/CDS
Intron
Rh7DG384100.1

Sequence Viewer

Length: 216 bp
ATGGAGGAGGATTCACCAAATCCTCCAGTTTCATTGCGTGCCAGGATTTCTGCCCTGAAGACAGTGGCTTGGGAAGAATATAAAAGCAAGCCAATCTCATATTGGATTCTTCTACTTCTAAGCAGTGTGGCAATGCTCGTAGTGTTTCCTGCATCAAGCCTTCTATCTCGTATCTATTTTGCCAATGACGGCACTAGCAAGTGGATCATTTCATAG
Functional Annotation

Protein Analysis

71

Amino Acids

7.99

Weight (kDa)

8.06

Isoelectric Point (pI)

49.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0031261)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0003271.1_g000008
rosa_samantha Rh7DG384100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 212
AcuI CTGAAG 1 cut(s) 77
AjnI CCWGG 1 cut(s) 41
AlwI GGATC 1 cut(s) 212
AsuHPI GGTGA 1 cut(s) 6
BbsI GAAGAC 1 cut(s) 65
BceAI ACGGC 1 cut(s) 205
BciT130I CCWGG 1 cut(s) 43
BfaI CTAG 1 cut(s) 195
Bme1390I CCNGG 1 cut(s) 43
BmrFI CCNGG 1 cut(s) 43
BmsI GCATC 1 cut(s) 161
BpiI GAAGAC 1 cut(s) 65
BpmI CTGGAG 1 cut(s) 9
Bse1I ACTGG 1 cut(s) 26
Bse3DI GCAATG 2 cut(s) 32, 138
BseBI CCWGG 1 cut(s) 43
BseMI GCAATG 2 cut(s) 32, 138
BseNI ACTGG 1 cut(s) 26
BseRI GAGGAG 1 cut(s) 20
Bsp143I GATC 1 cut(s) 204
BspPI GGATC 1 cut(s) 212
BsrDI GCAATG 2 cut(s) 32, 138
BsrI ACTGG 1 cut(s) 26
BssMI GATC 1 cut(s) 204
Bst2UI CCWGG 1 cut(s) 43
Bst4CI ACNGT 1 cut(s) 64
BstC8I GCNNGC 2 cut(s) 39, 89
BstDEI CTNAG 1 cut(s) 119
BstKTI GATC 1 cut(s) 207
BstMBI GATC 1 cut(s) 204
BstNI CCWGG 1 cut(s) 43
BstSCI CCNGG 1 cut(s) 41
BstV2I GAAGAC 1 cut(s) 65
BtsI GCAGTG 1 cut(s) 130
BtsIMutI CAGTG 2 cut(s) 69, 130
Cac8I GCNNGC 2 cut(s) 39, 89
CviJI RGCY 3 cut(s) 68, 91, 159
CviKI_1 RGCY 3 cut(s) 68, 91, 159
DdeI CTNAG 1 cut(s) 119
DpnI GATC 1 cut(s) 206
DpnII GATC 1 cut(s) 204
Eco57I CTGAAG 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 41
FaiI YATR 3 cut(s) 81, 100, 214
FspBI CTAG 1 cut(s) 195
GsuI CTGGAG 1 cut(s) 9
HinfI GANTC 2 cut(s) 11, 106
HphI GGTGA 1 cut(s) 6
HpyAV CCTTC 1 cut(s) 170
HpyCH4III ACNGT 1 cut(s) 64
HpyCH4V TGCA 1 cut(s) 152
HpyF3I CTNAG 1 cut(s) 119
Kzo9I GATC 1 cut(s) 204
LpnPI CCDG 5 cut(s) 28, 39, 55, 68, 162
LweI GCATC 1 cut(s) 161
MaeI CTAG 1 cut(s) 195
MalI GATC 1 cut(s) 206
MboI GATC 1 cut(s) 204
MboII GAAGA 3 cut(s) 70, 86, 101
MnlI CCTC 1 cut(s) 33
MspR9I CCNGG 1 cut(s) 43
MvaI CCWGG 1 cut(s) 43
NdeII GATC 1 cut(s) 204
PfeI GAWTC 2 cut(s) 11, 106
Psp6I CCWGG 1 cut(s) 41
PspGI CCWGG 1 cut(s) 41
Sau3AI GATC 1 cut(s) 204
ScrFI CCNGG 1 cut(s) 43
SfaNI GCATC 1 cut(s) 161
SspMI CTAG 1 cut(s) 195
StyD4I CCNGG 1 cut(s) 41
TaaI ACNGT 1 cut(s) 64
TfiI GAWTC 2 cut(s) 11, 106
TscAI CASTG 2 cut(s) 69, 130
TspDTI ATGAA 2 cut(s) 21, 201
TspRI CASTG 2 cut(s) 69, 130
XcmI CCANNNNNNNNNTGG 1 cut(s) 99
XspI CTAG 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.