Crossover junction endonuclease
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0078731 |
| rosa_samantha | Rh2AG290200 Rh2DG315000 |
| rosa_wichuraiana | Rw5G006250 Rw6G034150 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 379 |
| AccI | GTMKAC | 1 cut(s) | 205 |
| AcoI | YGGCCR | 1 cut(s) | 62 |
| AcsI | RAATTY | 1 cut(s) | 135 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 43 |
| AgsI | TTSAA | 1 cut(s) | 407 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 235, 267 |
| AluBI | AGCT | 4 cut(s) | 11, 290, 317, 402 |
| AluI | AGCT | 4 cut(s) | 11, 290, 317, 402 |
| Alw21I | GWGCWC | 1 cut(s) | 292 |
| Alw26I | GTCTC | 1 cut(s) | 123 |
| AoxI | GGCC | 1 cut(s) | 62 |
| ApeKI | GCWGC | 3 cut(s) | 314, 317, 379 |
| ApoI | RAATTY | 1 cut(s) | 135 |
| AseI | ATTAAT | 1 cut(s) | 249 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 250 |
| AspS9I | GGNCC | 2 cut(s) | 233, 332 |
| AsuHPI | GGTGA | 1 cut(s) | 188 |
| AvaII | GGWCC | 2 cut(s) | 233, 332 |
| BalI | TGGCCA | 1 cut(s) | 64 |
| BanII | GRGCYC | 2 cut(s) | 292, 365 |
| BbsI | GAAGAC | 1 cut(s) | 71 |
| Bbv12I | GWGCWC | 1 cut(s) | 292 |
| BbvI | GCAGC | 3 cut(s) | 304, 326, 366 |
| BccI | CCATC | 4 cut(s) | 73, 160, 221, 277 |
| BcoDI | GTCTC | 1 cut(s) | 123 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BfuAI | ACCTGC | 1 cut(s) | 379 |
| BisI | GCNGC | 3 cut(s) | 315, 318, 380 |
| BlsI | GCNGC | 3 cut(s) | 316, 319, 381 |
| Bme18I | GGWCC | 2 cut(s) | 233, 332 |
| BmgT120I | GGNCC | 2 cut(s) | 233, 332 |
| BmsI | GCATC | 1 cut(s) | 275 |
| BpiI | GAAGAC | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 1 cut(s) | 344 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseDI | CCNNGG | 1 cut(s) | 344 |
| BseGI | GGATG | 2 cut(s) | 152, 232 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BseRI | GAGGAG | 1 cut(s) | 291 |
| BseXI | GCAGC | 3 cut(s) | 304, 326, 366 |
| BsgI | GTGCAG | 1 cut(s) | 377 |
| BshFI | GGCC | 1 cut(s) | 64 |
| BsiHKAI | GWGCWC | 1 cut(s) | 292 |
| BslFI | GGGAC | 1 cut(s) | 43 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 43 |
| BsmAI | GTCTC | 1 cut(s) | 123 |
| BsmFI | GGGAC | 1 cut(s) | 43 |
| BsnI | GGCC | 1 cut(s) | 64 |
| Bsp1286I | GDGCHC | 2 cut(s) | 292, 365 |
| BspANI | GGCC | 1 cut(s) | 64 |
| BspMI | ACCTGC | 1 cut(s) | 379 |
| BssECI | CCNNGG | 1 cut(s) | 344 |
| BssT1I | CCWWGG | 1 cut(s) | 344 |
| Bst6I | CTCTTC | 1 cut(s) | 58 |
| BstC8I | GCNNGC | 2 cut(s) | 365, 369 |
| BstF5I | GGATG | 2 cut(s) | 152, 232 |
| BstMAI | GTCTC | 1 cut(s) | 123 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 364, 385 |
| BstV1I | GCAGC | 3 cut(s) | 304, 326, 366 |
| BstV2I | GAAGAC | 1 cut(s) | 71 |
| BsuRI | GGCC | 1 cut(s) | 64 |
| BtsCI | GGATG | 2 cut(s) | 152, 232 |
| BtsIMutI | CAGTG | 1 cut(s) | 22 |
| BveI | ACCTGC | 1 cut(s) | 379 |
| Cac8I | GCNNGC | 2 cut(s) | 365, 369 |
| Cfr13I | GGNCC | 2 cut(s) | 233, 332 |
| CviAII | CATG | 1 cut(s) | 311 |
| CviJI | RGCY | 8 cut(s) | 11, 64, 290, 317, 363, 371, 379, 402 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 64, 290, 317, 363, 371, 379, 402 |
| EaeI | YGGCCR | 1 cut(s) | 62 |
| Eam1104I | CTCTTC | 1 cut(s) | 58 |
| EarI | CTCTTC | 1 cut(s) | 58 |
| Ecl136II | GAGCTC | 1 cut(s) | 290 |
| Eco130I | CCWWGG | 1 cut(s) | 344 |
| Eco24I | GRGCYC | 2 cut(s) | 292, 365 |
| Eco47I | GGWCC | 2 cut(s) | 233, 332 |
| Eco53kI | GAGCTC | 1 cut(s) | 290 |
| EcoICRI | GAGCTC | 1 cut(s) | 290 |
| EcoO109I | RGGNCCY | 1 cut(s) | 233 |
| EcoRI | GAATTC | 1 cut(s) | 135 |
| EcoT14I | CCWWGG | 1 cut(s) | 344 |
| EcoT38I | GRGCYC | 2 cut(s) | 292, 365 |
| ErhI | CCWWGG | 1 cut(s) | 344 |
| FaeI | CATG | 1 cut(s) | 314 |
| FaqI | GGGAC | 1 cut(s) | 43 |
| FatI | CATG | 1 cut(s) | 310 |
| FauNDI | CATATG | 2 cut(s) | 111, 384 |
| FblI | GTMKAC | 1 cut(s) | 205 |
| Fnu4HI | GCNGC | 3 cut(s) | 315, 318, 380 |
| FokI | GGATG | 2 cut(s) | 139, 239 |
| FriOI | GRGCYC | 2 cut(s) | 292, 365 |
| Fsp4HI | GCNGC | 3 cut(s) | 315, 318, 380 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GluI | GCNGC | 3 cut(s) | 315, 318, 380 |
| HaeIII | GGCC | 1 cut(s) | 64 |
| Hin1II | CATG | 1 cut(s) | 314 |
| HphI | GGTGA | 1 cut(s) | 188 |
| Hpy166II | GTNNAC | 1 cut(s) | 206 |
| Hpy188I | TCNGA | 1 cut(s) | 256 |
| Hpy188III | TCNNGA | 1 cut(s) | 86 |
| Hpy8I | GTNNAC | 1 cut(s) | 206 |
| HpyAV | CCTTC | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 5 cut(s) | 266, 314, 358, 382, 388 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 364, 385 |
| Hsp92II | CATG | 1 cut(s) | 314 |
| LmnI | GCTCC | 2 cut(s) | 287, 295 |
| LpnPI | CCDG | 2 cut(s) | 344, 374 |
| Lsp1109I | GCAGC | 3 cut(s) | 304, 326, 366 |
| LweI | GCATC | 1 cut(s) | 275 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MboII | GAAGA | 5 cut(s) | 45, 71, 74, 101, 131 |
| MhlI | GDGCHC | 2 cut(s) | 292, 365 |
| MlsI | TGGCCA | 1 cut(s) | 64 |
| MluCI | AATT | 4 cut(s) | 135, 246, 250, 305 |
| MluNI | TGGCCA | 1 cut(s) | 64 |
| MnlI | CCTC | 3 cut(s) | 88, 224, 312 |
| Mox20I | TGGCCA | 1 cut(s) | 64 |
| MroXI | GAANNNNTTC | 1 cut(s) | 250 |
| MscI | TGGCCA | 1 cut(s) | 64 |
| MseI | TTAA | 1 cut(s) | 249 |
| Msp20I | TGGCCA | 1 cut(s) | 64 |
| MspA1I | CMGCKG | 1 cut(s) | 317 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 364, 385 |
| NdeI | CATATG | 2 cut(s) | 111, 384 |
| NlaIII | CATG | 1 cut(s) | 314 |
| PdmI | GAANNNNTTC | 1 cut(s) | 250 |
| PkrI | GCNGC | 3 cut(s) | 316, 319, 381 |
| PpuMI | RGGWCCY | 1 cut(s) | 233 |
| PshBI | ATTAAT | 1 cut(s) | 249 |
| Psp124BI | GAGCTC | 1 cut(s) | 292 |
| Psp5II | RGGWCCY | 1 cut(s) | 233 |
| PspPI | GGNCC | 2 cut(s) | 233, 332 |
| PspPPI | RGGWCCY | 1 cut(s) | 233 |
| PvuII | CAGCTG | 1 cut(s) | 317 |
| SacI | GAGCTC | 1 cut(s) | 292 |
| SaqAI | TTAA | 1 cut(s) | 249 |
| SatI | GCNGC | 3 cut(s) | 315, 318, 380 |
| Sau96I | GGNCC | 2 cut(s) | 233, 332 |
| SduI | GDGCHC | 2 cut(s) | 292, 365 |
| SetI | ASST | 8 cut(s) | 13, 99, 235, 264, 292, 319, 393, 404 |
| SfaNI | GCATC | 1 cut(s) | 275 |
| SinI | GGWCC | 2 cut(s) | 233, 332 |
| Sse9I | AATT | 4 cut(s) | 135, 246, 250, 305 |
| SspMI | CTAG | 1 cut(s) | 222 |
| SstI | GAGCTC | 1 cut(s) | 292 |
| StyI | CCWWGG | 1 cut(s) | 344 |
| TaqI | TCGA | 1 cut(s) | 85 |
| TasI | AATT | 4 cut(s) | 135, 246, 250, 305 |
| Tru1I | TTAA | 1 cut(s) | 249 |
| Tru9I | TTAA | 1 cut(s) | 249 |
| TscAI | CASTG | 1 cut(s) | 22 |
| TseI | GCWGC | 3 cut(s) | 314, 317, 379 |
| TspDTI | ATGAA | 5 cut(s) | 17, 98, 128, 285, 299 |
| TspRI | CASTG | 1 cut(s) | 22 |
| VpaK11BI | GGWCC | 2 cut(s) | 233, 332 |
| VspI | ATTAAT | 1 cut(s) | 249 |
| XapI | RAATTY | 1 cut(s) | 135 |
| XmiI | GTMKAC | 1 cut(s) | 205 |
| XmnI | GAANNNNTTC | 1 cut(s) | 250 |
| XspI | CTAG | 1 cut(s) | 222 |