AT1G06970

cation H( )

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0023814
Physical Location & Seq
Forward (+)
2137871 .. 2140975
3105 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G06970.1

Sequence Viewer

Length: 2490 bp
ATGTCAAAGCTAGACCTGGAGGAGGTGAACTCGATGCAGAGAGGCAAAGTTCATGGGCCATTCTTGGTGGAAAACATGGTGTGCCAGAAAAACCACATGTTGACCTCAAAGGGTGTTTTCTTGGGCAGTGACCCTCTCAAATACGCAATGCCACTTATGTTGCTGCAAATGTCCGTCATCATCATCACCTCAAGGCTTCTCTACCGCCTCCTCAAGCCCTTGAAGCAAGGCATGATCTCTGCCCAAGTCTTGGCTGGGATCATCCTAGGACCGTCTCTCTTTGGCCAAAGCAGCGCATATATGCAGATGTTCCTCCCCATAAGCGGCAAAATCACTTTACAAACGCTCTCAAACCTCGGGTTCTTCATCCATCTCTTCTTACTTGGACTAAGAATCGACGCTAGCATCATTCGTAAAGCTGGTTCCAAAGCCATACTCATTGGCACAGCTTCCTACGCCTTGCCATTCTCCCTCGGTAACCTCACTGTCCTCTTTTTGAAAAACACTTACAACCTCCCGCCAGACGTTGTCCACTGCATAAGCACAGTGATCTCCCTCAATGCAATGACCTCATTCCCGGTCACCACAACCGTCTTAGCTGAGCTTAACATCCTTAACTCTGATCTTGGACGGTTAGCCACAAACTGCTCCATTGTCTGTGAGGCCTTTAGCTGGATAGTTGCACTTGTTTTCAGAATGTTCTTGCGGGATGGGACACTAGCTAGCGTTTGGTCTTTCGTTTGGGTGACTGCTCTTATCCTCGTGATTTTCTTCGTCTGCAGACCGGCTATCATCTGGTTGACAGAGAGAAGAAGCATTTCGATCGATAAAGCAGGCGAGATCCCATTCTTCCCGATCATAATGGTCCTGCTGACGATAAGCTTGACCTCCGAAGTTCTCGGGGTCCATGCGGCGTTTGGAGCGTTCTGGCTCGGAGTATCACTCCCGGATGGACCTCCTTTAGGGACCGGGCTCACCACAAAGCTCGAAATGTTTGCAACGAGCCTTATGCTCCCTTGTTTCATCTCCATTAGTGGATTGCAGACCAATTTCTTCATTATCGGAGAAAGCCACGTGAAGATCATTGAGGCCGTTATACTCATCACCTACGGCTGCAAATTCCTAGGAACAGCAGCAGCTTCCGCTTATTGCAACATACAAATCGGAGACGCATTTTCTTTGGCCCTCTTGATGTGTTGCCAAGGAGTCATTGAGATTTACACATGTGTCATGTGGAAAGACGAAAAGGTTCTAAACACAGAATGCTTCAATCTCCTTATCATCACGCTCTTGCTCGTGACAGGTATTTCGCGGTTCCTCGTAGTTTGCCTCTATGACCCGTCTAAACGCTACAGAAGCAAGAGTAAGCGAACGATCCTCGATACGAGACAACGGAACCTTCAGTTCCGGCTCCTGCTCTGTGTCTACAACGTTGAAAATGTACCTTCCATGGTTAATCTTCTAGAAGCTTCTTACCCGAGTAGGTTCAGCCCGATCTCTGTCTTCACACTCCACCTTGTCGAGCTTAAAGGTCGAGCGCACGCCGTGCTCGTGCCGCATCATCAGATGAACAAACTCGATCCCAACACAGTTCAATCCACTCACATCGTCAACGGTTTCCAACGATTCGAACAGCAGAACCAAGGAACCCTAATGGCTCAGCATTTCACAGCTGCAGCTCCATTCTCCAGCATCAACGATGACATTTGCACTCTCGCCCTCGACAAGAAAGCGACGCTCATCGTCATCCCTTTCCACAAACAGTACGCGATAGACGGGACGGTAGACCACGTGAACCCATCAATCCGTAACATAAACCTTAACGTGCTAGAAAAGGCACCTTGTTCTGTCGGAATATTCATCGATCGAGGAGAAACAGAAGGCCGCCGCTCGGTCCTCATGAGCTACACATGGCGAAACGTCGCAGTGATCTTCATCGAAGGCCGAGATGACGCAGAAGCCCTAGCTTTCTCCATGAGAATCGCAGAGCACCCGGAAGTAAGCGTCACGATGATCCATTTCCGCCATAAGAGCTCCCTCCAGCAGAACCACGTAGTAGATGTGGAATCCGAATTAGCAGAGTCCTACCTTATAAACGATTTCAAGAATTTCGCAATGAGCAAACCGAAAATCAGTTACAGAGAAGAGATAGTGAGAGATGGCGTGGAAACCACGCAAGTGATTAGTTCACTAGGGGATTCATTCGATCTGGTGGTTGTGGGTCGTGACCATGACCTTGAGTCGTCGGTGTTATACGGACTTACAGACTGGAGCGAGTGCCCTGAGCTAGGTGTGATCGGAGACATGTTTGCGTCGTCGGATTTTCATTTCTCGGTGCTAGTGATTCATCAACAAGAAGGAGATTCTCTAGCGATGGATAATAGCTATAAATTGCCAGCTTCACCTCATAGGGTTGGGGATCCAAGAGTGCACCCTCGTTTCTCTGTTGAAGAAGGCTTTACTTCTGTTGATCTTCACAGCAACCGTTAA

Protein Analysis

829

Amino Acids

92.16

Weight (kDa)

6.56

Isoelectric Point (pI)

36.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 66 - 439 6.7e-70 Sodium/hydrogen exchanger, transmembrane
CHX17_2nd PF23256 501 - 625 5.1e-13 Plant cation/H(+) antiporter domain
CHX17_C PF23259 641 - 785 2.2e-09 Plant cation/H(+) antiporter, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0023814)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G06970 AT2G30240
prunus_persica Prupe.6G047300_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2093
AccB1I GGYRCC 1 cut(s) 1837
AccB7I CCANNNNNTGG 1 cut(s) 250
AccBSI CCGCTC 1 cut(s) 1890
AccI GTMKAC 2 cut(s) 1425, 1785
AccII CGCG 2 cut(s) 1312, 1769
AclI AACGTT 1 cut(s) 1431
AclWI GGATC 7 cut(s) 266, 835, 1369, 1574, 2008, 2414, 2427
AcoI YGGCCR 1 cut(s) 283
AcsI RAATTY 2 cut(s) 1118, 2107
AcuI CTGAAG 1 cut(s) 1385
AcvI CACGTG 2 cut(s) 1075, 1792
AdeI CACNNNGTG 1 cut(s) 1546
AfaI GTAC 2 cut(s) 1443, 1766
AfiI CCNNNNNNNGG 7 cut(s) 22, 250, 323, 672, 962, 1891, 2288
AflIII ACRYGT 3 cut(s) 96, 1223, 2304
AgsI TTSAA 7 cut(s) 223, 499, 1270, 1436, 1595, 2104, 2450
AhdI GACNNNNNGTC 1 cut(s) 2239
AjnI CCWGG 1 cut(s) 15
AleI CACNNNNGTG 1 cut(s) 2177
Alw21I GWGCWC 4 cut(s) 1551, 1992, 2036, 2433
Alw26I GTCTC 4 cut(s) 279, 1161, 1381, 2295
Alw44I GTGCAC 1 cut(s) 2429
AlwI GGATC 7 cut(s) 266, 835, 1369, 1574, 2008, 2414, 2427
Ama87I CYCGRG 3 cut(s) 356, 899, 1477
AoxI GGCC 7 cut(s) 56, 283, 663, 1089, 1182, 1882, 1942
ApaLI GTGCAC 1 cut(s) 2429
ApeKI GCWGC 7 cut(s) 163, 291, 1113, 1133, 1136, 1673, 1676
ApoI RAATTY 2 cut(s) 1118, 2107
ArsI GACNNNNNNTTYG 2 cut(s) 1291, 1323
Asp700I GAANNNNTTC 2 cut(s) 817, 1248
AspA2I CCTAGG 2 cut(s) 265, 1123
AspLEI GCGC 2 cut(s) 296, 1540
AspS9I GGNCC 8 cut(s) 56, 269, 865, 904, 953, 966, 1183, 1894
AsuC2I CCSGG 4 cut(s) 578, 947, 970, 1994
AsuHPI GGTGA 7 cut(s) 37, 178, 574, 757, 967, 1096, 2394
AsuII TTCGAA 1 cut(s) 1629
AsuNHI GCTAGC 2 cut(s) 401, 722
AvaI CYCGRG 3 cut(s) 356, 899, 1477
AvaII GGWCC 6 cut(s) 269, 865, 904, 953, 966, 1894
AvrII CCTAGG 2 cut(s) 265, 1123
BaeGI GKGCMC 2 cut(s) 2282, 2433
BalI TGGCCA 1 cut(s) 285
BamHI GGATCC 1 cut(s) 2419
BanI GGYRCC 1 cut(s) 1837
BanII GRGCYC 2 cut(s) 975, 2036
BauI CACGAG 3 cut(s) 761, 1295, 1550
BbrPI CACGTG 2 cut(s) 1075, 1792
BbsI GAAGAC 1 cut(s) 1495
Bbv12I GWGCWC 4 cut(s) 1551, 1992, 2036, 2433
BbvI GCAGC 7 cut(s) 150, 303, 1100, 1145, 1148, 1660, 1688
BccI CCATC 6 cut(s) 378, 704, 944, 1807, 2153, 2368
BceAI ACGGC 3 cut(s) 1076, 1126, 1529
BcgI CGANNNNNNTGC 6 cut(s) 805, 839, 977, 991, 1011, 1025
BciT130I CCWGG 1 cut(s) 17
BcnI CCSGG 4 cut(s) 578, 947, 970, 1994
BcoDI GTCTC 4 cut(s) 279, 1161, 1381, 2295
BfmI CTRYAG 3 cut(s) 778, 1351, 1674
BlnI CCTAGG 2 cut(s) 265, 1123
BlpI GCTNAGC 2 cut(s) 600, 1659
Bme1390I CCNGG 5 cut(s) 17, 578, 947, 970, 1994
Bme18I GGWCC 6 cut(s) 269, 865, 904, 953, 966, 1894
BmeRI GACNNNNNGTC 1 cut(s) 2239
BmeT110I CYCGRG 3 cut(s) 356, 899, 1477
BmgT120I GGNCC 8 cut(s) 56, 269, 865, 904, 953, 966, 1183, 1894
BmiI GGNNCC 9 cut(s) 424, 905, 967, 1316, 1397, 1412, 1648, 1839, 2421
BmrFI CCNGG 5 cut(s) 17, 578, 947, 970, 1994
BmsI GCATC 4 cut(s) 24, 414, 1567, 1701
BmtI GCTAGC 2 cut(s) 405, 726
BpiI GAAGAC 1 cut(s) 1495
BplI GAGNNNNNCTC 4 cut(s) 14, 46, 927, 959
BpmI CTGGAG 4 cut(s) 38, 1672, 2024, 2290
Bpu10I CCTNAGC 1 cut(s) 2283
Bpu1102I GCTNAGC 2 cut(s) 600, 1659
Bpu14I TTCGAA 1 cut(s) 1629
BpuEI CTTGAG 3 cut(s) 175, 197, 2258
BpuMI CCSGG 4 cut(s) 578, 947, 970, 1994
Bsa29I ATCGAT 2 cut(s) 825, 1863
BsaAI YACGTR 3 cut(s) 1075, 1792, 2053
BsaBI GATNNNNATC 1 cut(s) 1934
BsaJI CCNNGG 7 cut(s) 265, 355, 472, 1123, 1201, 1449, 1642
Bsc4I CCNNNNNNNGG 7 cut(s) 22, 250, 323, 672, 962, 1891, 2288
Bse118I RCCGGY 1 cut(s) 784
Bse1I ACTGG 1 cut(s) 2273
Bse3DI GCAATG 3 cut(s) 153, 570, 2121
Bse8I GATNNNNATC 1 cut(s) 1934
BseBI CCWGG 1 cut(s) 17
BseCI ATCGAT 2 cut(s) 825, 1863
BseDI CCNNGG 7 cut(s) 265, 355, 472, 1123, 1201, 1449, 1642
BseGI GGATG 6 cut(s) 261, 366, 609, 715, 955, 1746
BseJI GATNNNNATC 1 cut(s) 1934
BseLI CCNNNNNNNGG 7 cut(s) 22, 250, 323, 672, 962, 1891, 2288
BseMI GCAATG 3 cut(s) 153, 570, 2121
BseMII CTCAG 3 cut(s) 591, 1673, 2274
BseNI ACTGG 1 cut(s) 2273
BseRI GAGGAG 3 cut(s) 35, 200, 1884
BseSI GKGCMC 2 cut(s) 2282, 2433
BseXI GCAGC 7 cut(s) 150, 303, 1100, 1145, 1148, 1660, 1688
BseYI CCCAGC 1 cut(s) 254
Bsh1236I CGCG 2 cut(s) 1312, 1769
Bsh1285I CGRYCG 2 cut(s) 825, 1867
BshFI GGCC 7 cut(s) 58, 285, 665, 1091, 1184, 1884, 1944
BshNI GGYRCC 1 cut(s) 1837
BshVI ATCGAT 2 cut(s) 825, 1863
BsiEI CGRYCG 2 cut(s) 825, 1867
BsiHKAI GWGCWC 4 cut(s) 1551, 1992, 2036, 2433
BsiHKCI CYCGRG 3 cut(s) 356, 899, 1477
BsiSI CCGG 6 cut(s) 578, 785, 947, 969, 1408, 1994
BslFI GGGAC 3 cut(s) 727, 979, 1792
BslI CCNNNNNNNGG 7 cut(s) 22, 250, 323, 672, 962, 1891, 2288
BsmAI GTCTC 4 cut(s) 279, 1161, 1381, 2295
BsmBI CGTCTC 2 cut(s) 279, 1161
BsmFI GGGAC 3 cut(s) 727, 979, 1792
BsmI GAATGC 1 cut(s) 1268
BsnI GGCC 7 cut(s) 58, 285, 665, 1091, 1184, 1884, 1944
BsoBI CYCGRG 3 cut(s) 356, 899, 1477
Bsp119I TTCGAA 1 cut(s) 1629
Bsp1286I GDGCHC 6 cut(s) 975, 1551, 1992, 2036, 2282, 2433
Bsp1720I GCTNAGC 2 cut(s) 600, 1659
Bsp19I CCATGG 1 cut(s) 1449
BspANI GGCC 7 cut(s) 58, 285, 665, 1091, 1184, 1884, 1944
BspCNI CTCAG 3 cut(s) 592, 1672, 2275
BspDI ATCGAT 2 cut(s) 825, 1863
BspFNI CGCG 2 cut(s) 1312, 1769
BspHI TCATGA 1 cut(s) 1899
BspLI GGNNCC 9 cut(s) 424, 905, 967, 1316, 1397, 1412, 1648, 1839, 2421
BspMAI CTGCAG 2 cut(s) 782, 1678
BspOI GCTAGC 2 cut(s) 405, 726
BspPI GGATC 7 cut(s) 266, 835, 1369, 1574, 2008, 2414, 2427
BspT104I TTCGAA 1 cut(s) 1629
BspT107I GGYRCC 1 cut(s) 1837
BsrBI CCGCTC 1 cut(s) 1890
BsrDI GCAATG 3 cut(s) 153, 570, 2121
BsrFI RCCGGY 1 cut(s) 784
BsrI ACTGG 1 cut(s) 2273
BssAI RCCGGY 1 cut(s) 784
BssECI CCNNGG 7 cut(s) 265, 355, 472, 1123, 1201, 1449, 1642
BssSI CACGAG 3 cut(s) 761, 1295, 1550
BssT1I CCWWGG 5 cut(s) 265, 1123, 1201, 1449, 1642
Bst2BI CACGAG 3 cut(s) 761, 1295, 1550
Bst2UI CCWGG 1 cut(s) 17
Bst6I CTCTTC 2 cut(s) 380, 2139
BstAPI GCANNNNNTGC 1 cut(s) 1546
BstBAI YACGTR 3 cut(s) 1075, 1792, 2053
BstBI TTCGAA 1 cut(s) 1629
BstC8I GCNNGC 5 cut(s) 403, 724, 835, 1542, 2397
BstDEI CTNAG 5 cut(s) 389, 595, 600, 1659, 2283
BstDSI CCRYGG 1 cut(s) 1449
BstEII GGTNACC 2 cut(s) 476, 580
BstENI CCTNNNNNAGG 3 cut(s) 20, 960, 2286
BstF5I GGATG 6 cut(s) 261, 366, 609, 715, 955, 1746
BstFNI CGCG 2 cut(s) 1312, 1769
BstHHI GCGC 2 cut(s) 296, 1540
BstMAI GTCTC 4 cut(s) 279, 1161, 1381, 2295
BstMCI CGRYCG 2 cut(s) 825, 1867
BstMWI GCNNNNNNNGC 9 cut(s) 223, 291, 455, 920, 1142, 1356, 1546, 1555, 2031
BstNI CCWGG 1 cut(s) 17
BstNSI RCATGY 3 cut(s) 100, 1227, 2308
BstPI GGTNACC 2 cut(s) 476, 580
BstSCI CCNGG 5 cut(s) 15, 576, 945, 968, 1992
BstSFI CTRYAG 3 cut(s) 778, 1351, 1674
BstSLI GKGCMC 2 cut(s) 2282, 2433
BstUI CGCG 2 cut(s) 1312, 1769
BstV1I GCAGC 7 cut(s) 150, 303, 1100, 1145, 1148, 1660, 1688
BstV2I GAAGAC 1 cut(s) 1495
BstX2I RGATCY 2 cut(s) 840, 2419
BstYI RGATCY 2 cut(s) 840, 2419
Bsu15I ATCGAT 2 cut(s) 825, 1863
BsuRI GGCC 7 cut(s) 58, 285, 665, 1091, 1184, 1884, 1944
BsuTUI ATCGAT 2 cut(s) 825, 1863
BtgI CCRYGG 1 cut(s) 1449
BtgZI GCGATG 1 cut(s) 2387
BtsCI GGATG 6 cut(s) 261, 366, 609, 715, 955, 1746
BtsI GCAGTG 3 cut(s) 133, 532, 1932
BtsIMutI CAGTG 5 cut(s) 133, 483, 532, 552, 1932
Cac8I GCNNGC 5 cut(s) 403, 724, 835, 1542, 2397
CciI TCATGA 1 cut(s) 1899
CfoI GCGC 2 cut(s) 296, 1540
Cfr10I RCCGGY 1 cut(s) 784
Cfr13I GGNCC 8 cut(s) 56, 269, 865, 904, 953, 966, 1183, 1894
ClaI ATCGAT 2 cut(s) 825, 1863
CseI GACGC 6 cut(s) 407, 1178, 1744, 1961, 1993, 2301
Csp6I GTAC 2 cut(s) 1442, 1765
CspCI CAANNNNNGTGG 2 cut(s) 141, 176
CviQI GTAC 2 cut(s) 1442, 1765
DdeI CTNAG 5 cut(s) 389, 595, 600, 1659, 2283
DraIII CACNNNGTG 1 cut(s) 1546
DriI GACNNNNNGTC 1 cut(s) 2239
EaeI YGGCCR 1 cut(s) 283
Eam1104I CTCTTC 2 cut(s) 380, 2139
Eam1105I GACNNNNNGTC 1 cut(s) 2239
EarI CTCTTC 2 cut(s) 380, 2139
EciI GGCGGA 1 cut(s) 2012
Ecl136II GAGCTC 1 cut(s) 2034
Eco130I CCWWGG 5 cut(s) 265, 1123, 1201, 1449, 1642
Eco147I AGGCCT 1 cut(s) 665
Eco24I GRGCYC 2 cut(s) 975, 2036
Eco47I GGWCC 6 cut(s) 269, 865, 904, 953, 966, 1894
Eco53kI GAGCTC 1 cut(s) 2034
Eco57I CTGAAG 1 cut(s) 1385
Eco72I CACGTG 2 cut(s) 1075, 1792
Eco88I CYCGRG 3 cut(s) 356, 899, 1477
Eco91I GGTNACC 2 cut(s) 476, 580
EcoICRI GAGCTC 1 cut(s) 2034
EcoNI CCTNNNNNAGG 3 cut(s) 20, 960, 2286
EcoO65I GGTNACC 2 cut(s) 476, 580
EcoRII CCWGG 1 cut(s) 15
EcoT14I CCWWGG 5 cut(s) 265, 1123, 1201, 1449, 1642
EcoT38I GRGCYC 2 cut(s) 975, 2036
ErhI CCWWGG 5 cut(s) 265, 1123, 1201, 1449, 1642
Esp3I CGTCTC 2 cut(s) 279, 1161
FaqI GGGAC 3 cut(s) 727, 979, 1792
FauI CCCGC 2 cut(s) 525, 699
FblI GTMKAC 2 cut(s) 1425, 1785
FokI GGATG 6 cut(s) 248, 353, 596, 722, 962, 1733
FriOI GRGCYC 2 cut(s) 975, 2036
GlaI GCGC 2 cut(s) 295, 1539
GsaI CCCAGC 1 cut(s) 258
GsuI CTGGAG 4 cut(s) 38, 1672, 2024, 2290
HaeIII GGCC 7 cut(s) 58, 285, 665, 1091, 1184, 1884, 1944
HapII CCGG 6 cut(s) 578, 785, 947, 969, 1408, 1994
HgaI GACGC 6 cut(s) 407, 1178, 1744, 1961, 1993, 2301
HhaI GCGC 2 cut(s) 296, 1540
Hin6I GCGC 2 cut(s) 294, 1538
HinP1I GCGC 2 cut(s) 294, 1538
HincII GTYRAC 3 cut(s) 102, 801, 1612
HindII GTYRAC 3 cut(s) 102, 801, 1612
HindIII AAGCTT 2 cut(s) 880, 1467
HpaII CCGG 6 cut(s) 578, 785, 947, 969, 1408, 1994
HphI GGTGA 7 cut(s) 37, 178, 574, 757, 967, 1096, 2394
Hpy188III TCNNGA 9 cut(s) 763, 853, 1189, 1297, 1463, 1900, 2008, 2104, 2225
Hpy99I CGWCG 6 cut(s) 401, 1738, 1925, 2248, 2317, 2320
HpyAV CCTTC 6 cut(s) 1409, 1455, 1874, 1934, 2351, 2447
HpyCH4IV ACGT 7 cut(s) 525, 1074, 1431, 1791, 1824, 1920, 2052
HpyF10VI GCNNNNNNNGC 9 cut(s) 223, 291, 455, 920, 1142, 1356, 1546, 1555, 2031
HpyF3I CTNAG 5 cut(s) 389, 595, 600, 1659, 2283
HpySE526I ACGT 7 cut(s) 525, 1074, 1431, 1791, 1824, 1920, 2052
HspAI GCGC 2 cut(s) 294, 1538
LmnI GCTCC 7 cut(s) 653, 920, 1017, 1416, 1684, 2039, 2271
Lsp1109I GCAGC 7 cut(s) 150, 303, 1100, 1145, 1148, 1660, 1688
LweI GCATC 4 cut(s) 24, 414, 1567, 1701
MaeII ACGT 7 cut(s) 525, 1074, 1431, 1791, 1824, 1920, 2052
MaeIII GTNAC 9 cut(s) 128, 476, 580, 745, 1297, 1808, 2005, 2135, 2225
MbiI CCGCTC 1 cut(s) 1890
MflI RGATCY 2 cut(s) 840, 2419
MhlI GDGCHC 6 cut(s) 975, 1551, 1992, 2036, 2282, 2433
MlsI TGGCCA 1 cut(s) 285
MluCI AATT 5 cut(s) 1048, 1118, 2072, 2107, 2390
MluNI TGGCCA 1 cut(s) 285
MlyI GAGTC 3 cut(s) 1215, 2090, 2249
MmeI TCCRAC 3 cut(s) 1645, 1831, 2298
Mox20I TGGCCA 1 cut(s) 285
MroXI GAANNNNTTC 2 cut(s) 817, 1248
MscI TGGCCA 1 cut(s) 285
MseI TTAA 6 cut(s) 606, 615, 1455, 1527, 1821, 2488
MslI CAYNNNNRTG 1 cut(s) 2177
Msp20I TGGCCA 1 cut(s) 285
MspA1I CMGCKG 1 cut(s) 1673
MspI CCGG 6 cut(s) 578, 785, 947, 969, 1408, 1994
MspR9I CCNGG 5 cut(s) 17, 578, 947, 970, 1994
Mva1269I GAATGC 1 cut(s) 1268
MvaI CCWGG 1 cut(s) 17
MvnI CGCG 2 cut(s) 1312, 1769
MwoI GCNNNNNNNGC 9 cut(s) 223, 291, 455, 920, 1142, 1356, 1546, 1555, 2031
NciI CCSGG 4 cut(s) 578, 947, 970, 1994
NcoI CCATGG 1 cut(s) 1449
NheI GCTAGC 2 cut(s) 401, 722
NlaIV GGNNCC 9 cut(s) 424, 905, 967, 1316, 1397, 1412, 1648, 1839, 2421
NmeAIII GCCGAG 1 cut(s) 1970
NmuCI GTSAC 6 cut(s) 128, 580, 745, 1297, 2005, 2225
NspI RCATGY 3 cut(s) 100, 1227, 2308
NspV TTCGAA 1 cut(s) 1629
OliI CACNNNNGTG 1 cut(s) 2177
PagI TCATGA 1 cut(s) 1899
PceI AGGCCT 1 cut(s) 665
PciI ACATGT 3 cut(s) 96, 1223, 2304
PcsI WCGNNNNNNNCGW 1 cut(s) 1548
PctI GAATGC 1 cut(s) 1268
PdmI GAANNNNTTC 2 cut(s) 817, 1248
PfeI GAWTC 7 cut(s) 393, 1626, 1980, 2066, 2198, 2344, 2363
PflFI GACNNNGTC 1 cut(s) 527
PflMI CCANNNNNTGG 1 cut(s) 250
PfoI TCCNGGA 1 cut(s) 945
Ple19I CGATCG 2 cut(s) 825, 1867
PleI GAGTC 3 cut(s) 1214, 2089, 2248
PmaCI CACGTG 2 cut(s) 1075, 1792
PmlI CACGTG 2 cut(s) 1075, 1792
PpsI GAGTC 3 cut(s) 1214, 2089, 2248
Ppu21I YACGTR 3 cut(s) 1075, 1792, 2053
PscI ACATGT 3 cut(s) 96, 1223, 2304
PsiI TTATAA 1 cut(s) 2093
Psp124BI GAGCTC 1 cut(s) 2036
Psp1406I AACGTT 1 cut(s) 1431
Psp6I CCWGG 1 cut(s) 15
PspCI CACGTG 2 cut(s) 1075, 1792
PspEI GGTNACC 2 cut(s) 476, 580
PspFI CCCAGC 1 cut(s) 254
PspGI CCWGG 1 cut(s) 15
PspN4I GGNNCC 9 cut(s) 424, 905, 967, 1316, 1397, 1412, 1648, 1839, 2421
PspPI GGNCC 8 cut(s) 56, 269, 865, 904, 953, 966, 1183, 1894
PsrI GAACNNNNNNTAC 2 cut(s) 406, 438
PstI CTGCAG 2 cut(s) 782, 1678
PsuI RGATCY 2 cut(s) 840, 2419
PsyI GACNNNGTC 1 cut(s) 527
PvuI CGATCG 2 cut(s) 825, 1867
PvuII CAGCTG 1 cut(s) 1673
RsaI GTAC 2 cut(s) 1443, 1766
RsaNI GTAC 2 cut(s) 1442, 1765
RseI CAYNNNNRTG 1 cut(s) 2177
SacI GAGCTC 1 cut(s) 2036
SaqAI TTAA 6 cut(s) 606, 615, 1455, 1527, 1821, 2488
Sau96I GGNCC 8 cut(s) 56, 269, 865, 904, 953, 966, 1183, 1894
SchI GAGTC 3 cut(s) 1215, 2090, 2249
ScrFI CCNGG 5 cut(s) 17, 578, 947, 970, 1994
SduI GDGCHC 6 cut(s) 975, 1551, 1992, 2036, 2282, 2433
SfaNI GCATC 4 cut(s) 24, 414, 1567, 1701
SfcI CTRYAG 3 cut(s) 778, 1351, 1674
SfuI TTCGAA 1 cut(s) 1629
SinI GGWCC 6 cut(s) 269, 865, 904, 953, 966, 1894
SmiMI CAYNNNNRTG 1 cut(s) 2177
SmlI CTYRAG 3 cut(s) 190, 212, 2237
SmoI CTYRAG 3 cut(s) 190, 212, 2237
Sse9I AATT 5 cut(s) 1048, 1118, 2072, 2107, 2390
SseBI AGGCCT 1 cut(s) 665
SspI AATATT 1 cut(s) 1857
SstI GAGCTC 1 cut(s) 2036
StuI AGGCCT 1 cut(s) 665
StyD4I CCNGG 5 cut(s) 15, 576, 945, 968, 1992
StyI CCWWGG 5 cut(s) 265, 1123, 1201, 1449, 1642
TaiI ACGT 7 cut(s) 528, 1077, 1434, 1794, 1827, 1923, 2055
TaqII GACCGA 1 cut(s) 1882
TasI AATT 5 cut(s) 1048, 1118, 2072, 2107, 2390
TauI GCSGC 5 cut(s) 327, 914, 1558, 1887, 1890
TfiI GAWTC 7 cut(s) 393, 1626, 1980, 2066, 2198, 2344, 2363
Tru1I TTAA 6 cut(s) 606, 615, 1455, 1527, 1821, 2488
Tru9I TTAA 6 cut(s) 606, 615, 1455, 1527, 1821, 2488
TscAI CASTG 5 cut(s) 133, 490, 539, 552, 1932
TseFI GTSAC 6 cut(s) 128, 580, 745, 1297, 2005, 2225
TseI GCWGC 7 cut(s) 163, 291, 1113, 1133, 1136, 1673, 1676
Tsp45I GTSAC 6 cut(s) 128, 580, 745, 1297, 2005, 2225
TspGWI ACGGA 4 cut(s) 163, 1408, 1796, 2271
TspRI CASTG 5 cut(s) 133, 490, 539, 552, 1932
Tth111I GACNNNGTC 1 cut(s) 527
Van91I CCANNNNNTGG 1 cut(s) 250
VneI GTGCAC 1 cut(s) 2429
VpaK11BI GGWCC 6 cut(s) 269, 865, 904, 953, 966, 1894
XagI CCTNNNNNAGG 3 cut(s) 20, 960, 2286
XapI RAATTY 2 cut(s) 1118, 2107
XbaI TCTAGA 1 cut(s) 1462
XceI RCATGY 3 cut(s) 100, 1227, 2308
XcmI CCANNNNNNNNNTGG 2 cut(s) 251, 914
XmaJI CCTAGG 2 cut(s) 265, 1123
XmiI GTMKAC 2 cut(s) 1425, 1785
XmnI GAANNNNTTC 2 cut(s) 817, 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.