Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0023814

Physical Location & Seq

Genomic Coordinates Reverse (-)

12899575 .. 12902815

Gene Structure 3241 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G30240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2496 bp

ATGGAGCTTTCGATGTTTGGCAGAGAAGATACCAACTCGTCGCAGTGGGGCGAAGTGCACGGTCCATTCATGCTGGAAGAGATTGTGTGCCAGGCACAAAACATGCTGACCTCAAGAGGCATTTTCATGAAAAGTAACCCTCTCAAATACGCATTGCCTCTTCTATTGCTACAAATGTCAGTCATCATCGTCACCTCTAGGCTTATCTTCCGCGTCCTTCAACCTTTAAAGCAAGGAATGATCTCTGCTCAAGTCTTGACTGGTGTTGTTTTAGGACCGTCTTTCTTAGGACATAATGTGATTTACATGAACATGTTTCTTCCCGCGGGAGGCAAGATCATAATACAAACGCTTTCAAACGTCGGTTTCGTCATCCATCTCTTCCTCCTCGGACTCAAAATCGATGGGAGTATTATCAGAAAAGCTGGTTCTAAAGCCATTCTTATTGGTACAGCCTCTTACGCCTTCCCGTTCTCTCTTGGGAACCTCACGATTATGTTCATTAGTAAAACTATGGGACTTCCCAGCGACGTGATTAGTTGTACAAGCAGCGCAATCTCCTTGAGCTCTATGACTTCATTCCCGGTTACAACCACGGTCTTAGCGGAACTTAACATCCTTAACTCCGAGCTAGGTCGTTTAGCCACCCACTGCTCAATGGTCTGCGAAGTTTGTAGCTGGTTTGTCGCTCTCGCTTTTAATCTCTACACACGTGACCGGACGATGACTAGTCTTTACGCGCTTTCCATGATCATAGGTCTCCTTCTGGTGATTTATTTCGTCTTTAGACCTATAATAGTATGGCTCACCCAGAGGAAAACCAAATCCATGGATAAGAAAGACGTTGTCCCGTTCTTTCCGGTACTCTTGCTTTTATCTATAGCTAGCCTTAGTGGAGAGGCCATGGGGGTCCATGCTGCGTTTGGAGCGTTTTGGTTAGGTGTTTCGCTCCCTGATGGTCCACCTTTAGGCACGGAACTTGCTGCAAAACTCGAGATGTTTGCTTCGAATTTGTTCCTCCCTTGTTTCATTGCCATTAGTGGGTTGCAAACTAATTTCTTTGAGATAACAGAGAGCCATGAGCACCATGTGGTAATGATTGAGATAATTCTCTTGATCACTTATGGATGCAAGTTCCTTGGAACAGCAGCTGCGTCTGCTTACTGCCAAACGCAGATTGGAGACGCGCTTTGTTTGGCCTTCTTGATGTGTTGCCAAGGTATCATTGAAGTCTACACTACTATCGTGTGGAAAGACGCTCAGGTTGTTGATACAGAATGCTTTAATCTGGTGATCATCACGATTTTGTTCGTAACTGGTATTTCCCGGTTCCTCGTGGTGTACCTCTACGACCCTTCAAAACGTTACAAAAGCAAAAGCAAACGAACAATCCTCAACACGAGACAACATAATCTTCAGCTACGTCTTCTCCTTGGTCTCTATAATGTTGAAAACGTTCCTTCCATGGTTAATCTTCTAGAAGCTACTTACCCGACACGGTTTAACCCGATCTCATTCTTTACGTTGCACCTCGTCGAGCTTAAAGGCCGAGCTCATGCACTCCTTACACCACACCATCAGATGAACAAACTTGACCCTAACACGGCCCAGTCCACACATATTGTCAACGCCTTTCAGCGTTTTGAGCAAAAGTACCAGGGAGCTCTCATGGCGCAACACTTTACCGCAGCCGCGCCTTACTCGAGTATAAACAACGACATATGCACGCTGGCCCTCGACAAGAAAGCGACGTTAATCGTGATTCCGTTCCACAAGCAGTACGCGATTGACGGGACGGTCGGACAAGTCAACGGGCCCATCCGGACCATAAACCTTAACGTGTTGGACGCGGCACCTTGTTCGGTGGCAATATTCATAGACCGAGGAGAGACCGAGGGACGTCGGTCCGTGTTGATGACCAATACGTGGCAGAACGTTGCGATGCTCTTCATCGGTGGCAAGGATGATGCGGAAGCGCTCGCGTTATGCATGAGGATGGCTGAAAAACCAGACCTTAACGTTACGATGATACATTTCCGTCACAAGAGCGCTCTTCAAGACGAAGATTACAGCGACATGTCTGAGTACAATCTCATCAGTGATTTCAAGAGCTATGCAGCGAACAAAGGGAAAATTCACTACGTAGAGGAGATAGTGAGAGATGGCGTGGAGACTACGCAAGTGATTAGCTCACTTGGAGATGCCTATGACATGGTGTTAGTGGGTCGAGACCATGACCTAGAGTCTTCGGTCTTGTACGGACTCACGGACTGGAGTGAGTGCCCTGAGTTAGGTGTGATCGGAGATATGTTGACGTCGCCGGATTTTCATTTCTCCGTACTTGTCGTTCATCAGCAGCAAGGAGACGACTTACTGGCCATGGACGATAGTTATAAATTGCCTAACGTCGAGCATCAGAAGATTGGTGATACTGGAATACAACAACGTTTCTCTGCTGAAGAAGGTTTCACTACCATTGATCTCGGTAAACGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006885 GO:0008150 GO:0008324 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015079 GO:0015318 GO:0015672 GO:0016020 GO:0022857 GO:0022890 GO:0030001 GO:0034220 GO:0042592 GO:0044464 GO:0046873 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055067 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

831

Amino Acids

92.19

Weight (kDa)

6.03

Isoelectric Point (pI)

33.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	66 - 445	4.1e-71	Sodium/hydrogen exchanger, transmembrane
CHX17_2nd	PF23256	506 - 630	6.3e-13	Plant cation/H(+) antiporter domain
CHX17_C	PF23259	646 - 787	2.9e-10	Plant cation/H(+) antiporter, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0023814)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06970 AT2G30240
prunus_persica	Prupe.6G047300_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2394
AasI	GACNNNNNNGTC	1 cut(s)	1796
AatII	GACGTC	2 cut(s)	1903, 2318
AccB1I	GGYRCC	1 cut(s)	1852
AccB7I	CCANNNNNTGG	1 cut(s)	1926
AccI	GTMKAC	1 cut(s)	1233
AccII	CGCG	8 cut(s)	213, 326, 740, 1187, 1694, 1784, 1850, 1982
AccIII	TCCGGA	1 cut(s)	1821
AciI	CCGC	8 cut(s)	211, 324, 326, 605, 1686, 1692, 1850, 1970
AclI	AACGTT	5 cut(s)	1363, 1455, 1935, 2019, 2446
AcoI	YGGCCR	1 cut(s)	2376
AcsI	RAATTY	2 cut(s)	1009, 2133
AcuI	CTGAAG	2 cut(s)	1400, 2478
AcvI	CACGTG	1 cut(s)	713
AcyI	GRCGYC	2 cut(s)	1900, 2315
AdeI	CACNNNGTG	1 cut(s)	1090
AfaI	GTAC	9 cut(s)	451, 544, 864, 1343, 1655, 1781, 2087, 2258, 2340
AfeI	AGCGCT	2 cut(s)	1977, 2050
AfiI	CCNNNNNNNGG	6 cut(s)	329, 968, 1041, 1603, 1926, 2291
AflIII	ACRYGT	4 cut(s)	312, 710, 1839, 2076
AgsI	TTSAA	7 cut(s)	221, 357, 1229, 1359, 1451, 2057, 2107
AhdI	GACNNNNNGTC	1 cut(s)	2242
AhlI	ACTAGT	1 cut(s)	728
AjiI	CACGTC	1 cut(s)	532
AjnI	CCWGG	2 cut(s)	90, 1656
AloI	GAACNNNNNNTCC	2 cut(s)	600, 632
Alw21I	GWGCWC	5 cut(s)	60, 569, 1086, 1555, 1666
Alw26I	GTCTC	8 cut(s)	764, 1176, 1396, 1442, 1883, 2165, 2223, 2358
Alw44I	GTGCAC	1 cut(s)	56
AlwNI	CAGNNNCTG	1 cut(s)	1151
Ama87I	CYCGRG	2 cut(s)	992, 1702
Aor13HI	TCCGGA	1 cut(s)	1821
Aor51HI	AGCGCT	2 cut(s)	1977, 2050
AoxI	GGCC	7 cut(s)	900, 1197, 1546, 1605, 1731, 1814, 2376
ApaI	GGGCCC	1 cut(s)	1818
ApaLI	GTGCAC	1 cut(s)	56
ApeKI	GCWGC	8 cut(s)	549, 917, 983, 1148, 1151, 1688, 2117, 2356
ApoI	RAATTY	2 cut(s)	1009, 2133
Asp700I	GAANNNNTTC	2 cut(s)	1013, 1455
AspLEI	GCGC	7 cut(s)	554, 742, 1189, 1675, 1696, 1978, 2051
AsuC2I	CCSGG	2 cut(s)	584, 1327
AsuHPI	GGTGA	5 cut(s)	184, 781, 799, 1303, 2438
AsuII	TTCGAA	1 cut(s)	1007
AsuNHI	GCTAGC	1 cut(s)	884
AvaI	CYCGRG	2 cut(s)	992, 1702
AvaII	GGWCC	6 cut(s)	62, 275, 910, 959, 1824, 1905
BaeGI	GKGCMC	3 cut(s)	60, 1818, 2285
BalI	TGGCCA	1 cut(s)	2378
BanI	GGYRCC	1 cut(s)	1852
BanII	GRGCYC	4 cut(s)	569, 1555, 1666, 1818
BauI	CACGAG	2 cut(s)	1334, 1399
BbrPI	CACGTG	1 cut(s)	713
BbsI	GAAGAC	2 cut(s)	1418, 2238
Bbv12I	GWGCWC	5 cut(s)	60, 569, 1086, 1555, 1666
BbvI	GCAGC	8 cut(s)	561, 904, 970, 1138, 1160, 1700, 2129, 2368
BccI	CCATC	7 cut(s)	384, 398, 950, 1584, 1826, 1990, 2156
BceAI	ACGGC	1 cut(s)	1620
BcgI	CGANNNNNNTGC	4 cut(s)	983, 1017, 1842, 1876
BciT130I	CCWGG	2 cut(s)	92, 1658
BclI	TGATCA	3 cut(s)	750, 1116, 1293
BcnI	CCSGG	2 cut(s)	584, 1327
BcoDI	GTCTC	8 cut(s)	764, 1176, 1396, 1442, 1883, 2165, 2223, 2358
BcuI	ACTAGT	1 cut(s)	728
BfaI	CTAG	7 cut(s)	198, 632, 729, 885, 1478, 2240, 2494
BfmI	CTRYAG	1 cut(s)	879
BfoI	RGCGCY	2 cut(s)	1979, 2052
Bme1390I	CCNGG	4 cut(s)	92, 584, 1327, 1658
Bme18I	GGWCC	6 cut(s)	62, 275, 910, 959, 1824, 1905
BmeRI	GACNNNNNGTC	1 cut(s)	2242
BmeT110I	CYCGRG	2 cut(s)	992, 1702
BmgBI	CACGTC	1 cut(s)	532
BmiI	GGNNCC	5 cut(s)	485, 911, 1331, 1816, 1854
BmrFI	CCNGG	4 cut(s)	92, 584, 1327, 1658
BmrI	ACTGGG	1 cut(s)	1603
BmsI	GCATC	5 cut(s)	1118, 1932, 1957, 2191, 2422
BmtI	GCTAGC	1 cut(s)	888
BmuI	ACTGGG	1 cut(s)	1603
BoxI	GACNNNNGTC	1 cut(s)	1903
BpiI	GAAGAC	2 cut(s)	1418, 2238
BpmI	CTGGAG	1 cut(s)	2293
Bpu10I	CCTNAGC	1 cut(s)	1260
Bpu14I	TTCGAA	1 cut(s)	1007
BpuEI	CTTGAG	3 cut(s)	97, 234, 583
BpuMI	CCSGG	2 cut(s)	584, 1327
Bsa29I	ATCGAT	1 cut(s)	402
BsaAI	YACGTR	3 cut(s)	713, 1926, 2143
BsaHI	GRCGYC	2 cut(s)	1900, 2315
BsaI	GGTCTC	4 cut(s)	764, 1442, 1883, 2223
BsaWI	WCCGGW	3 cut(s)	717, 859, 1821
BsaXI	ACNNNNNCTCC	2 cut(s)	1413, 1443
Bsc4I	CCNNNNNNNGG	6 cut(s)	329, 968, 1041, 1603, 1926, 2291
Bse1I	ACTGG	6 cut(s)	265, 1321, 1609, 2276, 2379, 2437
Bse3DI	GCAATG	2 cut(s)	152, 1029
BseAI	TCCGGA	1 cut(s)	1821
BseBI	CCWGG	2 cut(s)	92, 1658
BseCI	ATCGAT	1 cut(s)	402
BseGI	GGATG	6 cut(s)	372, 615, 1133, 1818, 1969, 2001
BseLI	CCNNNNNNNGG	6 cut(s)	329, 968, 1041, 1603, 1926, 2291
BseMI	GCAATG	2 cut(s)	152, 1029
BseMII	CTCAG	3 cut(s)	1274, 2073, 2277
BseNI	ACTGG	6 cut(s)	265, 1321, 1609, 2276, 2379, 2437
BseRI	GAGGAG	3 cut(s)	377, 1899, 2162
BseSI	GKGCMC	3 cut(s)	60, 1818, 2285
BseXI	GCAGC	8 cut(s)	561, 904, 970, 1138, 1160, 1700, 2129, 2368
BseYI	CCCAGC	1 cut(s)	524
Bsh1236I	CGCG	8 cut(s)	213, 326, 740, 1187, 1694, 1784, 1850, 1982
Bsh1285I	CGRYCG	1 cut(s)	1800
BshFI	GGCC	7 cut(s)	902, 1199, 1548, 1607, 1733, 1816, 2378
BshNI	GGYRCC	1 cut(s)	1852
BshVI	ATCGAT	1 cut(s)	402
BsiEI	CGRYCG	1 cut(s)	1800
BsiHKAI	GWGCWC	5 cut(s)	60, 569, 1086, 1555, 1666
BsiHKCI	CYCGRG	2 cut(s)	992, 1702
BsiSI	CCGG	6 cut(s)	584, 718, 860, 1327, 1822, 2321
BslFI	GGGAC	4 cut(s)	531, 833, 1807, 1911
BslI	CCNNNNNNNGG	6 cut(s)	329, 968, 1041, 1603, 1926, 2291
BsmAI	GTCTC	8 cut(s)	764, 1176, 1396, 1442, 1883, 2165, 2223, 2358
BsmBI	CGTCTC	2 cut(s)	1176, 2358
BsmFI	GGGAC	4 cut(s)	531, 833, 1807, 1911
BsmI	GAATGC	1 cut(s)	1283
BsnI	GGCC	7 cut(s)	902, 1199, 1548, 1607, 1733, 1816, 2378
Bso31I	GGTCTC	4 cut(s)	764, 1442, 1883, 2223
BsoBI	CYCGRG	2 cut(s)	992, 1702
Bsp119I	TTCGAA	1 cut(s)	1007
Bsp120I	GGGCCC	1 cut(s)	1814
Bsp1286I	GDGCHC	7 cut(s)	60, 569, 1086, 1555, 1666, 1818, 2285
Bsp13I	TCCGGA	1 cut(s)	1821
Bsp1407I	TGTACA	1 cut(s)	542
Bsp143I	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
Bsp19I	CCATGG	4 cut(s)	828, 903, 1464, 2379
BspACI	CCGC	8 cut(s)	211, 324, 326, 605, 1686, 1692, 1850, 1970
BspANI	GGCC	7 cut(s)	902, 1199, 1548, 1607, 1733, 1816, 2378
BspCNI	CTCAG	3 cut(s)	1273, 2074, 2278
BspDI	ATCGAT	1 cut(s)	402
BspEI	TCCGGA	1 cut(s)	1821
BspFNI	CGCG	8 cut(s)	213, 326, 740, 1187, 1694, 1784, 1850, 1982
BspHI	TCATGA	1 cut(s)	126
BspLI	GGNNCC	5 cut(s)	485, 911, 1331, 1816, 1854
BspOI	GCTAGC	1 cut(s)	888
BspQI	GCTCTTC	2 cut(s)	1952, 2058
BspT104I	TTCGAA	1 cut(s)	1007
BspT107I	GGYRCC	1 cut(s)	1852
BspTNI	GGTCTC	4 cut(s)	764, 1442, 1883, 2223
BsrDI	GCAATG	2 cut(s)	152, 1029
BsrGI	TGTACA	1 cut(s)	542
BsrI	ACTGG	6 cut(s)	265, 1321, 1609, 2276, 2379, 2437
BssMI	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
BssNI	GRCGYC	2 cut(s)	1900, 2315
BssSI	CACGAG	2 cut(s)	1334, 1399
BssT1I	CCWWGG	7 cut(s)	828, 903, 1138, 1216, 1432, 1464, 2379
Bst2BI	CACGAG	2 cut(s)	1334, 1399
Bst2UI	CCWGG	2 cut(s)	92, 1658
Bst4CI	ACNGT	5 cut(s)	62, 279, 598, 1500, 1798
Bst6I	CTCTTC	5 cut(s)	72, 165, 386, 1952, 2058
BstACI	GRCGYC	2 cut(s)	1900, 2315
BstAUI	TGTACA	1 cut(s)	542
BstBAI	YACGTR	3 cut(s)	713, 1926, 2143
BstBI	TTCGAA	1 cut(s)	1007
BstC8I	GCNNGC	4 cut(s)	886, 1727, 1731, 1980
BstDEI	CTNAG	6 cut(s)	286, 601, 890, 1260, 2082, 2286
BstDSI	CCRYGG	6 cut(s)	324, 594, 828, 903, 1464, 2379
BstENI	CCTNNNNNAGG	1 cut(s)	2289
BstF5I	GGATG	6 cut(s)	372, 615, 1133, 1818, 1969, 2001
BstFNI	CGCG	8 cut(s)	213, 326, 740, 1187, 1694, 1784, 1850, 1982
BstH2I	RGCGCY	2 cut(s)	1979, 2052
BstHHI	GCGC	7 cut(s)	554, 742, 1189, 1675, 1696, 1978, 2051
BstKTI	GATC	8 cut(s)	243, 339, 753, 1119, 1296, 1512, 2301, 2482
BstMAI	GTCTC	8 cut(s)	764, 1176, 1396, 1442, 1883, 2165, 2223, 2358
BstMBI	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
BstMCI	CGRYCG	1 cut(s)	1800
BstMWI	GCNNNNNNNGC	5 cut(s)	461, 926, 1157, 1645, 1670
BstNI	CCWGG	2 cut(s)	92, 1658
BstNSI	RCATGY	3 cut(s)	106, 316, 2080
BstPAI	GACNNNNGTC	1 cut(s)	1903
BstSCI	CCNGG	4 cut(s)	90, 582, 1325, 1656
BstSFI	CTRYAG	1 cut(s)	879
BstSLI	GKGCMC	3 cut(s)	60, 1818, 2285
BstSNI	TACGTA	1 cut(s)	2143
BstUI	CGCG	8 cut(s)	213, 326, 740, 1187, 1694, 1784, 1850, 1982
BstV1I	GCAGC	8 cut(s)	561, 904, 970, 1138, 1160, 1700, 2129, 2368
BstV2I	GAAGAC	2 cut(s)	1418, 2238
BstXI	CCANNNNNNTGG	1 cut(s)	829
Bsu15I	ATCGAT	1 cut(s)	402
BsuRI	GGCC	7 cut(s)	902, 1199, 1548, 1607, 1733, 1816, 2378
BsuTUI	ATCGAT	1 cut(s)	402
BtgI	CCRYGG	6 cut(s)	324, 594, 828, 903, 1464, 2379
BtgZI	GCGATG	1 cut(s)	1955
BtrI	CACGTC	1 cut(s)	532
BtsCI	GGATG	6 cut(s)	372, 615, 1133, 1818, 1969, 2001
BtsI	GCAGTG	2 cut(s)	50, 649
BtsIMutI	CAGTG	3 cut(s)	50, 649, 2104
Cac8I	GCNNGC	4 cut(s)	886, 1727, 1731, 1980
CaiI	CAGNNNCTG	1 cut(s)	1151
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	7 cut(s)	554, 742, 1189, 1675, 1696, 1978, 2051
Cfr42I	CCGCGG	1 cut(s)	327
ClaI	ATCGAT	1 cut(s)	402
CpoI	CGGWCCG	1 cut(s)	1905
CseI	GACGC	5 cut(s)	202, 1143, 1193, 1265, 1856
Csp6I	GTAC	9 cut(s)	450, 543, 863, 1342, 1654, 1780, 2086, 2257, 2339
CspCI	CAANNNNNGTGG	2 cut(s)	1603, 1638
CspI	CGGWCCG	1 cut(s)	1905
CviQI	GTAC	9 cut(s)	450, 543, 863, 1342, 1654, 1780, 2086, 2257, 2339
DdeI	CTNAG	6 cut(s)	286, 601, 890, 1260, 2082, 2286
DpnI	GATC	8 cut(s)	242, 338, 752, 1118, 1295, 1511, 2300, 2481
DpnII	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
DraI	TTTAAA	1 cut(s)	228
DraIII	CACNNNGTG	1 cut(s)	1090
DrdI	GACNNNNNNGTC	1 cut(s)	1796
DriI	GACNNNNNGTC	1 cut(s)	2242
DseDI	GACNNNNNNGTC	1 cut(s)	1796
EaeI	YGGCCR	1 cut(s)	2376
Eam1104I	CTCTTC	5 cut(s)	72, 165, 386, 1952, 2058
Eam1105I	GACNNNNNGTC	1 cut(s)	2242
EarI	CTCTTC	5 cut(s)	72, 165, 386, 1952, 2058
Ecl136II	GAGCTC	3 cut(s)	567, 1553, 1664
Eco105I	TACGTA	1 cut(s)	2143
Eco130I	CCWWGG	7 cut(s)	828, 903, 1138, 1216, 1432, 1464, 2379
Eco24I	GRGCYC	4 cut(s)	569, 1555, 1666, 1818
Eco31I	GGTCTC	4 cut(s)	764, 1442, 1883, 2223
Eco47I	GGWCC	6 cut(s)	62, 275, 910, 959, 1824, 1905
Eco47III	AGCGCT	2 cut(s)	1977, 2050
Eco53kI	GAGCTC	3 cut(s)	567, 1553, 1664
Eco57I	CTGAAG	2 cut(s)	1400, 2478
Eco72I	CACGTG	1 cut(s)	713
Eco88I	CYCGRG	2 cut(s)	992, 1702
EcoICRI	GAGCTC	3 cut(s)	567, 1553, 1664
EcoNI	CCTNNNNNAGG	1 cut(s)	2289
EcoRII	CCWGG	2 cut(s)	90, 1656
EcoT14I	CCWWGG	7 cut(s)	828, 903, 1138, 1216, 1432, 1464, 2379
EcoT22I	ATGCAT	1 cut(s)	1991
EcoT38I	GRGCYC	4 cut(s)	569, 1555, 1666, 1818
ErhI	CCWWGG	7 cut(s)	828, 903, 1138, 1216, 1432, 1464, 2379
Esp3I	CGTCTC	2 cut(s)	1176, 2358
FalI	AAGNNNNNCTT	2 cut(s)	426, 458
FaqI	GGGAC	4 cut(s)	531, 833, 1807, 1911
FauI	CCCGC	2 cut(s)	319, 331
FauNDI	CATATG	1 cut(s)	1721
FbaI	TGATCA	3 cut(s)	750, 1116, 1293
FblI	GTMKAC	1 cut(s)	1233
FokI	GGATG	6 cut(s)	359, 602, 1140, 1805, 1976, 2008
FriOI	GRGCYC	4 cut(s)	569, 1555, 1666, 1818
FspBI	CTAG	7 cut(s)	198, 632, 729, 885, 1478, 2240, 2494
GlaI	GCGC	7 cut(s)	553, 741, 1188, 1674, 1695, 1977, 2050
GsaI	CCCAGC	1 cut(s)	528
GsuI	CTGGAG	1 cut(s)	2293
HaeII	RGCGCY	2 cut(s)	1979, 2052
HaeIII	GGCC	7 cut(s)	902, 1199, 1548, 1607, 1733, 1816, 2378
HapII	CCGG	6 cut(s)	584, 718, 860, 1327, 1822, 2321
HgaI	GACGC	5 cut(s)	202, 1143, 1193, 1265, 1856
HhaI	GCGC	7 cut(s)	554, 742, 1189, 1675, 1696, 1978, 2051
Hin1I	GRCGYC	2 cut(s)	1900, 2315
Hin6I	GCGC	7 cut(s)	552, 740, 1187, 1673, 1694, 1976, 2049
HinP1I	GCGC	7 cut(s)	552, 740, 1187, 1673, 1694, 1976, 2049
HincII	GTYRAC	3 cut(s)	1627, 1810, 2313
HindII	GTYRAC	3 cut(s)	1627, 1810, 2313
HinfI	GANTC	4 cut(s)	393, 1762, 2243, 2262
HpaII	CCGG	6 cut(s)	584, 718, 860, 1327, 1822, 2321
HphI	GGTGA	5 cut(s)	184, 781, 799, 1303, 2438
Hpy166II	GTNNAC	9 cut(s)	58, 962, 1234, 1342, 1614, 1627, 1810, 2313, 2489
Hpy188I	TCNGA	8 cut(s)	392, 419, 628, 1581, 1802, 2083, 2303, 2418
Hpy8I	GTNNAC	9 cut(s)	58, 962, 1234, 1342, 1614, 1627, 1810, 2313, 2489
Hpy99I	CGWCG	8 cut(s)	43, 365, 533, 1538, 1753, 1905, 2320, 2411
HpyAV	CCTTC	7 cut(s)	227, 475, 773, 1210, 1365, 1470, 2456
HpyCH4III	ACNGT	5 cut(s)	62, 279, 598, 1500, 1798
HpyCH4V	TGCA	9 cut(s)	58, 986, 1048, 1131, 1528, 1559, 1725, 1989, 2117
HpyF10VI	GCNNNNNNNGC	5 cut(s)	461, 926, 1157, 1645, 1670
HpyF3I	CTNAG	6 cut(s)	286, 601, 890, 1260, 2082, 2286
Hsp92I	GRCGYC	2 cut(s)	1900, 2315
HspAI	GCGC	7 cut(s)	552, 740, 1187, 1673, 1694, 1976, 2049
Kpn2I	TCCGGA	1 cut(s)	1821
Ksp22I	TGATCA	3 cut(s)	750, 1116, 1293
KspI	CCGCGG	1 cut(s)	327
Kzo9I	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
LguI	GCTCTTC	2 cut(s)	1952, 2058
LmnI	GCTCC	4 cut(s)	4, 926, 954, 1661
Lsp1109I	GCAGC	8 cut(s)	561, 904, 970, 1138, 1160, 1700, 2129, 2368
LweI	GCATC	5 cut(s)	1118, 1932, 1957, 2191, 2422
MaeI	CTAG	7 cut(s)	198, 632, 729, 885, 1478, 2240, 2494
MaeIII	GTNAC	8 cut(s)	134, 190, 586, 713, 1312, 1364, 2020, 2039
MalI	GATC	8 cut(s)	242, 338, 752, 1118, 1295, 1511, 2300, 2481
MboI	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
MhlI	GDGCHC	7 cut(s)	60, 569, 1086, 1555, 1666, 1818, 2285
MlsI	TGGCCA	1 cut(s)	2378
MluCI	AATT	5 cut(s)	1009, 1054, 1107, 2133, 2396
MluNI	TGGCCA	1 cut(s)	2378
MlyI	GAGTC	3 cut(s)	387, 2252, 2256
MmeI	TCCRAC	2 cut(s)	1780, 1824
Mox20I	TGGCCA	1 cut(s)	2378
Mph1103I	ATGCAT	1 cut(s)	1991
MroI	TCCGGA	1 cut(s)	1821
MroXI	GAANNNNTTC	2 cut(s)	1013, 1455
MscI	TGGCCA	1 cut(s)	2378
MslI	CAYNNNNRTG	4 cut(s)	125, 311, 494, 1994
Msp20I	TGGCCA	1 cut(s)	2378
MspA1I	CMGCKG	2 cut(s)	326, 1151
MspI	CCGG	6 cut(s)	584, 718, 860, 1327, 1822, 2321
MspR9I	CCNGG	4 cut(s)	92, 584, 1327, 1658
Mva1269I	GAATGC	1 cut(s)	1283
MvaI	CCWGG	2 cut(s)	92, 1658
MvnI	CGCG	8 cut(s)	213, 326, 740, 1187, 1694, 1784, 1850, 1982
MwoI	GCNNNNNNNGC	5 cut(s)	461, 926, 1157, 1645, 1670
NciI	CCSGG	2 cut(s)	584, 1327
NcoI	CCATGG	4 cut(s)	828, 903, 1464, 2379
NdeI	CATATG	1 cut(s)	1721
NdeII	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
NheI	GCTAGC	1 cut(s)	884
NlaIV	GGNNCC	5 cut(s)	485, 911, 1331, 1816, 1854
NmeAIII	GCCGAG	1 cut(s)	1574
NmuCI	GTSAC	3 cut(s)	190, 713, 2039
NsiI	ATGCAT	1 cut(s)	1991
NspI	RCATGY	3 cut(s)	106, 316, 2080
NspV	TTCGAA	1 cut(s)	1007
PaeR7I	CTCGAG	2 cut(s)	992, 1702
PagI	TCATGA	1 cut(s)	126
PciI	ACATGT	2 cut(s)	312, 2076
PciSI	GCTCTTC	2 cut(s)	1952, 2058
PcsI	WCGNNNNNNNCGW	1 cut(s)	366
PctI	GAATGC	1 cut(s)	1283
PdmI	GAANNNNTTC	2 cut(s)	1013, 1455
PfeI	GAWTC	1 cut(s)	1762
PflFI	GACNNNGTC	1 cut(s)	845
PflMI	CCANNNNNTGG	1 cut(s)	1926
PleI	GAGTC	3 cut(s)	387, 2251, 2256
PmaCI	CACGTG	1 cut(s)	713
PmlI	CACGTG	1 cut(s)	713
PpsI	GAGTC	3 cut(s)	387, 2251, 2256
Ppu21I	YACGTR	3 cut(s)	713, 1926, 2143
PscI	ACATGT	2 cut(s)	312, 2076
PshAI	GACNNNNGTC	1 cut(s)	1903
PsiI	TTATAA	1 cut(s)	2394
Psp124BI	GAGCTC	3 cut(s)	569, 1555, 1666
Psp1406I	AACGTT	5 cut(s)	1363, 1455, 1935, 2019, 2446
Psp6I	CCWGG	2 cut(s)	90, 1656
PspCI	CACGTG	1 cut(s)	713
PspFI	CCCAGC	1 cut(s)	524
PspGI	CCWGG	2 cut(s)	90, 1656
PspN4I	GGNNCC	5 cut(s)	485, 911, 1331, 1816, 1854
PspOMI	GGGCCC	1 cut(s)	1814
PspXI	VCTCGAGB	1 cut(s)	1702
PsrI	GAACNNNNNNTAC	2 cut(s)	2331, 2363
PstNI	CAGNNNCTG	1 cut(s)	1151
PsyI	GACNNNGTC	1 cut(s)	845
PvuII	CAGCTG	1 cut(s)	1151
RsaI	GTAC	9 cut(s)	451, 544, 864, 1343, 1655, 1781, 2087, 2258, 2340
RsaNI	GTAC	9 cut(s)	450, 543, 863, 1342, 1654, 1780, 2086, 2257, 2339
RseI	CAYNNNNRTG	4 cut(s)	125, 311, 494, 1994
Rsr2I	CGGWCCG	1 cut(s)	1905
RsrII	CGGWCCG	1 cut(s)	1905
SacI	GAGCTC	3 cut(s)	569, 1555, 1666
SacII	CCGCGG	1 cut(s)	327
SapI	GCTCTTC	2 cut(s)	1952, 2058
Sau3AI	GATC	8 cut(s)	240, 336, 750, 1116, 1293, 1509, 2298, 2479
SchI	GAGTC	3 cut(s)	387, 2252, 2256
ScrFI	CCNGG	4 cut(s)	92, 584, 1327, 1658
SduI	GDGCHC	7 cut(s)	60, 569, 1086, 1555, 1666, 1818, 2285
SfaNI	GCATC	5 cut(s)	1118, 1932, 1957, 2191, 2422
SfcI	CTRYAG	1 cut(s)	879
Sfr274I	CTCGAG	2 cut(s)	992, 1702
Sfr303I	CCGCGG	1 cut(s)	327
SfuI	TTCGAA	1 cut(s)	1007
SgrBI	CCGCGG	1 cut(s)	327
SinI	GGWCC	6 cut(s)	62, 275, 910, 959, 1824, 1905
SlaI	CTCGAG	2 cut(s)	992, 1702
SmiMI	CAYNNNNRTG	4 cut(s)	125, 311, 494, 1994
SmlI	CTYRAG	5 cut(s)	112, 249, 562, 992, 1702
SmoI	CTYRAG	5 cut(s)	112, 249, 562, 992, 1702
SnaBI	TACGTA	1 cut(s)	2143
SpeI	ACTAGT	1 cut(s)	728
Sse9I	AATT	5 cut(s)	1009, 1054, 1107, 2133, 2396
SsiI	CCGC	8 cut(s)	211, 324, 326, 605, 1686, 1692, 1850, 1970
SspI	AATATT	1 cut(s)	1872
SspMI	CTAG	7 cut(s)	198, 632, 729, 885, 1478, 2240, 2494
SstI	GAGCTC	3 cut(s)	569, 1555, 1666
StyD4I	CCNGG	4 cut(s)	90, 582, 1325, 1656
StyI	CCWWGG	7 cut(s)	828, 903, 1138, 1216, 1432, 1464, 2379
TaaI	ACNGT	5 cut(s)	62, 279, 598, 1500, 1798
TaqI	TCGA	9 cut(s)	11, 402, 993, 1007, 1536, 1703, 1737, 2227, 2409
TaqII	GACCGA	4 cut(s)	1893, 1896, 1907, 2239
TasI	AATT	5 cut(s)	1009, 1054, 1107, 2133, 2396
TatI	WGTACW	2 cut(s)	542, 2085
TauI	GCSGC	2 cut(s)	1694, 1853
TfiI	GAWTC	1 cut(s)	1762
TscAI	CASTG	3 cut(s)	50, 656, 2104
TseFI	GTSAC	3 cut(s)	190, 713, 2039
TseI	GCWGC	8 cut(s)	549, 917, 983, 1148, 1151, 1688, 2117, 2356
Tsp45I	GTSAC	3 cut(s)	190, 713, 2039
TspGWI	ACGGA	7 cut(s)	989, 1755, 1897, 2027, 2274, 2282, 2326
TspRI	CASTG	3 cut(s)	50, 656, 2104
Tth111I	GACNNNGTC	1 cut(s)	845
Van91I	CCANNNNNTGG	1 cut(s)	1926
VneI	GTGCAC	1 cut(s)	56
VpaK11BI	GGWCC	6 cut(s)	62, 275, 910, 959, 1824, 1905
XagI	CCTNNNNNAGG	1 cut(s)	2289
XapI	RAATTY	2 cut(s)	1009, 2133
XbaI	TCTAGA	1 cut(s)	1477
XceI	RCATGY	3 cut(s)	106, 316, 2080
XcmI	CCANNNNNNNNNTGG	2 cut(s)	920, 1175
XhoI	CTCGAG	2 cut(s)	992, 1702
XmiI	GTMKAC	1 cut(s)	1233
XmnI	GAANNNNTTC	2 cut(s)	1013, 1455
XspI	CTAG	7 cut(s)	198, 632, 729, 885, 1478, 2240, 2494
ZraI	GACGTC	2 cut(s)	1901, 2316
Zsp2I	ATGCAT	1 cut(s)	1991

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.