AT1G14770

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0021987
Physical Location & Seq
Reverse (-)
5086595 .. 5088898
2304 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G14770.2

Sequence Viewer

Length: 1290 bp
ATGGATGACCATGGTGGTTCTGATTTGAGCCTCGAGGATCTCATGGATGAGTATTCTTCTCGACCCGCACAAATAGCTGAATGGTTATGGTGTATTGAATATGTAGCCAAATTTGTCAAGGATCTAAGCTGCTTACTCGATTTGATGAACATTGGTTATCAGTACTCTGATGACTATGGGAAGAGGATTAATGAAGTCCTGTCTCTTAGAGTCTTGGAGTTCATGTTTGATCCAAGCATGAGCGATGCTAACGGTGTTGGTGTTGCTTCTGCTTTAGAGGAAAAAGTGGAGTTTGATTTATCTTTGAGTAACGCTGATGTTCTCAGAGGAATTCTGAAAGAGATTCCAGTAGCAGAACTACGAGTGGGCATGCCAGAGCTATCAAAGTTCAATGTTCTACCATTTATTGCTCACAAGAACTTGTGTTTGCCACAATGTGCACTAGAGAAGCTGAGAGATGTGAGTTTAATGGAGAATCAGACTAGTGCAACTCCTTTCATGGAAACAAATGACCCTGTTTTTAGAGATGATAGATCAGTGCACATGGATTTATGCGAGGAGGAGCCGGTAGATGAACAGCAATTACATATTGGTAACGCGAAGGAACCCACTGATGAGCAACATGTGCATATTGGTAACGAGAAGGAATCCATTGATGAGCAACAAGTGCATATTGGTTTGGAACTAAACAGAAACGAGAAGGATAAAGTAATTGCCATCGACGATGAAGATGAGCCAATGCACACCAATGAAAAAGGTGAAGTAGTTGTGATTAATGACGATACTGAGAGTGATCAAGGCACAACCAGTGATGGGACCTTTTCTCCAAGGCACAACGGTAATACTACCGATGAGACCACCTTTTCTCCAAGCTCTAGAAGATCTCCAGAGGATGCACATGTAAAATGTACAAAAGATGGAACCTGGTTAATCAGTGGGAGCGATGATGAGTCAGATAAAGATCCACCCTCGATCAAGAAAAATCCAAACACTTACTTGAACCTTCTTCCTTCGAGCTCCCGAACAAGACCGGAGAATGTATGCTGGAAGTGTGAGAAAGAAGGAACGTTATTGATTTGTAGCAGAAGCGAGTGTGCAGCAAAAGTTCACAAGGAGTGTTTGAATTGTCCGGTTAACGTTGATGAATACGGGAACTTTCTCTGCCCTCTGTGCTGGTATGACCGACTCGCAATGGAGTATCATGAATCTCAGAAGTTGATTAGCTGCGCAAAGAGAAGATTGGTGAAGTGTTTCCCGGTGCTTTCCATAAGAAGCAAGAGACTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

429

Amino Acids

48.56

Weight (kDa)

4.71

Isoelectric Point (pI)

58.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021987)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G14770 AT1G14770 AT1G68030 AT1G68030

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 32
Acc16I TGCGCA 1 cut(s) 1228
AccII CGCG 1 cut(s) 599
AciI CCGC 1 cut(s) 66
AclI AACGTT 2 cut(s) 1067, 1137
AclWI GGATC 4 cut(s) 45, 129, 224, 956
AcsI RAATTY 2 cut(s) 110, 330
AdeI CACNNNGTG 1 cut(s) 437
AfaI GTAC 2 cut(s) 164, 910
AfiI CCNNNNNNNGG 1 cut(s) 813
AflIII ACRYGT 2 cut(s) 622, 898
AgsI TTSAA 4 cut(s) 98, 391, 1000, 1123
AhlI ACTAGT 1 cut(s) 482
AjnI CCWGG 1 cut(s) 923
AluBI AGCT 7 cut(s) 77, 129, 379, 451, 873, 1017, 1224
AluI AGCT 7 cut(s) 77, 129, 379, 451, 873, 1017, 1224
Alw21I GWGCWC 3 cut(s) 442, 543, 1019
Alw26I GTCTC 3 cut(s) 207, 848, 1273
Alw44I GTGCAC 2 cut(s) 438, 539
AlwI GGATC 4 cut(s) 45, 129, 224, 956
Ama87I CYCGRG 1 cut(s) 32
ApaLI GTGCAC 2 cut(s) 438, 539
ApeKI GCWGC 3 cut(s) 129, 1097, 1224
ApoI RAATTY 2 cut(s) 110, 330
AseI ATTAAT 2 cut(s) 189, 774
Asp700I GAANNNNTTC 1 cut(s) 1250
AspLEI GCGC 1 cut(s) 1229
AspS9I GGNCC 1 cut(s) 816
AsuC2I CCSGG 1 cut(s) 1256
AsuHPI GGTGA 2 cut(s) 770, 1255
AvaI CYCGRG 1 cut(s) 32
AvaII GGWCC 1 cut(s) 816
BaeGI GKGCMC 2 cut(s) 442, 543
BanII GRGCYC 1 cut(s) 1019
Bbv12I GWGCWC 3 cut(s) 442, 543, 1019
BbvI GCAGC 3 cut(s) 116, 1109, 1211
BccI CCATC 3 cut(s) 725, 806, 911
BciT130I CCWGG 1 cut(s) 925
BclI TGATCA 1 cut(s) 793
BcnI CCSGG 1 cut(s) 1256
BcoDI GTCTC 3 cut(s) 207, 848, 1273
BcuI ACTAGT 1 cut(s) 482
BfaI CTAG 3 cut(s) 443, 483, 876
BglII AGATCT 1 cut(s) 881
BisI GCNGC 3 cut(s) 130, 1098, 1225
BlsI GCNGC 3 cut(s) 131, 1099, 1226
BmcAI AGTACT 1 cut(s) 164
Bme1390I CCNGG 2 cut(s) 925, 1256
Bme18I GGWCC 1 cut(s) 816
BmeT110I CYCGRG 1 cut(s) 32
BmgT120I GGNCC 1 cut(s) 816
BmiI GGNNCC 4 cut(s) 564, 606, 817, 922
BmrFI CCNGG 2 cut(s) 925, 1256
BmsI GCATC 2 cut(s) 235, 883
BpmI CTGGAG 1 cut(s) 870
BpuEI CTTGAG 1 cut(s) 1268
BpuMI CCSGG 1 cut(s) 1256
BsaBI GATNNNNATC 1 cut(s) 960
BsaI GGTCTC 1 cut(s) 848
BsaJI CCNNGG 2 cut(s) 10, 827
BsaWI WCCGGW 2 cut(s) 1030, 1129
BsaXI ACNNNNNCTCC 6 cut(s) 209, 239, 808, 838, 850, 880
Bsc4I CCNNNNNNNGG 1 cut(s) 813
Bse118I RCCGGY 1 cut(s) 565
Bse1I ACTGG 2 cut(s) 347, 807
Bse3DI GCAATG 1 cut(s) 1197
Bse8I GATNNNNATC 1 cut(s) 960
BseBI CCWGG 1 cut(s) 925
BseDI CCNNGG 2 cut(s) 10, 827
BseGI GGATG 3 cut(s) 10, 52, 898
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 1 cut(s) 813
BseMI GCAATG 1 cut(s) 1197
BseMII CTCAG 4 cut(s) 337, 443, 777, 1223
BseNI ACTGG 2 cut(s) 347, 807
BseRI GAGGAG 2 cut(s) 572, 575
BseSI GKGCMC 2 cut(s) 442, 543
BseXI GCAGC 3 cut(s) 116, 1109, 1211
BsgI GTGCAG 1 cut(s) 1116
Bsh1236I CGCG 1 cut(s) 599
BsiHKAI GWGCWC 3 cut(s) 442, 543, 1019
BsiHKCI CYCGRG 1 cut(s) 32
BsiSI CCGG 4 cut(s) 566, 1031, 1130, 1256
BslFI GGGAC 1 cut(s) 829
BslI CCNNNNNNNGG 1 cut(s) 813
BsmAI GTCTC 3 cut(s) 207, 848, 1273
BsmFI GGGAC 1 cut(s) 829
Bso31I GGTCTC 1 cut(s) 848
BsoBI CYCGRG 1 cut(s) 32
Bsp1286I GDGCHC 3 cut(s) 442, 543, 1019
Bsp1407I TGTACA 1 cut(s) 908
Bsp143I GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
Bsp19I CCATGG 1 cut(s) 10
BspACI CCGC 1 cut(s) 66
BspCNI CTCAG 4 cut(s) 336, 444, 778, 1222
BspFNI CGCG 1 cut(s) 599
BspHI TCATGA 1 cut(s) 1201
BspLI GGNNCC 4 cut(s) 564, 606, 817, 922
BspPI GGATC 4 cut(s) 45, 129, 224, 956
BspTNI GGTCTC 1 cut(s) 848
BsrDI GCAATG 1 cut(s) 1197
BsrFI RCCGGY 1 cut(s) 565
BsrGI TGTACA 1 cut(s) 908
BsrI ACTGG 2 cut(s) 347, 807
BssAI RCCGGY 1 cut(s) 565
BssECI CCNNGG 2 cut(s) 10, 827
BssMI GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
BssT1I CCWWGG 2 cut(s) 10, 827
Bst2UI CCWGG 1 cut(s) 925
Bst4CI ACNGT 2 cut(s) 254, 839
Bst6I CTCTTC 1 cut(s) 176
BstAPI GCANNNNNTGC 2 cut(s) 625, 667
BstAUI TGTACA 1 cut(s) 908
BstC8I GCNNGC 1 cut(s) 371
BstDEI CTNAG 6 cut(s) 125, 206, 323, 452, 786, 1209
BstDSI CCRYGG 1 cut(s) 10
BstF5I GGATG 3 cut(s) 10, 52, 898
BstFNI CGCG 1 cut(s) 599
BstHHI GCGC 1 cut(s) 1229
BstKTI GATC 8 cut(s) 40, 124, 232, 536, 796, 884, 964, 975
BstMAI GTCTC 3 cut(s) 207, 848, 1273
BstMBI GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
BstMWI GCNNNNNNNGC 4 cut(s) 74, 625, 667, 1170
BstNI CCWGG 1 cut(s) 925
BstNSI RCATGY 3 cut(s) 373, 626, 902
BstSCI CCNGG 2 cut(s) 923, 1254
BstSLI GKGCMC 2 cut(s) 442, 543
BstUI CGCG 1 cut(s) 599
BstV1I GCAGC 3 cut(s) 116, 1109, 1211
BstX2I RGATCY 4 cut(s) 37, 121, 881, 961
BstYI RGATCY 4 cut(s) 37, 121, 881, 961
BtgI CCRYGG 1 cut(s) 10
BtgZI GCGATG 2 cut(s) 258, 957
BtsCI GGATG 3 cut(s) 10, 52, 898
BtsIMutI CAGTG 4 cut(s) 543, 609, 814, 940
Cac8I GCNNGC 1 cut(s) 371
CciI TCATGA 1 cut(s) 1201
CfoI GCGC 1 cut(s) 1229
Cfr10I RCCGGY 1 cut(s) 565
Cfr13I GGNCC 1 cut(s) 816
CsiI ACCWGGT 1 cut(s) 923
Csp6I GTAC 2 cut(s) 163, 909
CviQI GTAC 2 cut(s) 163, 909
DdeI CTNAG 6 cut(s) 125, 206, 323, 452, 786, 1209
DpnI GATC 8 cut(s) 39, 123, 231, 535, 795, 883, 963, 974
DpnII GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
DraIII CACNNNGTG 1 cut(s) 437
Eam1104I CTCTTC 1 cut(s) 176
EarI CTCTTC 1 cut(s) 176
Ecl136II GAGCTC 1 cut(s) 1017
Eco130I CCWWGG 2 cut(s) 10, 827
Eco24I GRGCYC 1 cut(s) 1019
Eco31I GGTCTC 1 cut(s) 848
Eco47I GGWCC 1 cut(s) 816
Eco53kI GAGCTC 1 cut(s) 1017
Eco88I CYCGRG 1 cut(s) 32
EcoICRI GAGCTC 1 cut(s) 1017
EcoO109I RGGNCCY 1 cut(s) 816
EcoRI GAATTC 1 cut(s) 330
EcoRII CCWGG 1 cut(s) 923
EcoT14I CCWWGG 2 cut(s) 10, 827
EcoT38I GRGCYC 1 cut(s) 1019
ErhI CCWWGG 2 cut(s) 10, 827
FaqI GGGAC 1 cut(s) 829
FauI CCCGC 1 cut(s) 73
FbaI TGATCA 1 cut(s) 793
Fnu4HI GCNGC 3 cut(s) 130, 1098, 1225
FokI GGATG 3 cut(s) 17, 59, 905
FriOI GRGCYC 1 cut(s) 1019
Fsp4HI GCNGC 3 cut(s) 130, 1098, 1225
FspBI CTAG 3 cut(s) 443, 483, 876
FspI TGCGCA 1 cut(s) 1228
GlaI GCGC 1 cut(s) 1228
GluI GCNGC 3 cut(s) 130, 1098, 1225
GsuI CTGGAG 1 cut(s) 870
HapII CCGG 4 cut(s) 566, 1031, 1130, 1256
HhaI GCGC 1 cut(s) 1229
Hin6I GCGC 1 cut(s) 1227
HinP1I GCGC 1 cut(s) 1227
HincII GTYRAC 1 cut(s) 1135
HindII GTYRAC 1 cut(s) 1135
HinfI GANTC 8 cut(s) 210, 343, 475, 647, 950, 1185, 1205, 1281
HpaI GTTAAC 1 cut(s) 1135
HpaII CCGG 4 cut(s) 566, 1031, 1130, 1256
HphI GGTGA 2 cut(s) 770, 1255
Hpy166II GTNNAC 4 cut(s) 440, 541, 1108, 1135
Hpy188I TCNGA 7 cut(s) 22, 169, 326, 336, 480, 955, 1212
Hpy188III TCNNGA 6 cut(s) 60, 876, 887, 976, 1020, 1202
Hpy8I GTNNAC 4 cut(s) 440, 541, 1108, 1135
Hpy99I CGWCG 1 cut(s) 725
HpyAV CCTTC 6 cut(s) 595, 637, 694, 1013, 1020, 1055
HpyCH4III ACNGT 2 cut(s) 254, 839
HpyCH4IV ACGT 2 cut(s) 1067, 1137
HpyCH4V TGCA 8 cut(s) 440, 488, 541, 628, 670, 742, 896, 1097
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 625, 667, 1170
HpyF3I CTNAG 6 cut(s) 125, 206, 323, 452, 786, 1209
HpySE526I ACGT 2 cut(s) 1067, 1137
HspAI GCGC 1 cut(s) 1227
Ksp22I TGATCA 1 cut(s) 793
KspAI GTTAAC 1 cut(s) 1135
Kzo9I GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
LmnI GCTCC 3 cut(s) 562, 939, 1022
Lsp1109I GCAGC 3 cut(s) 116, 1109, 1211
LweI GCATC 2 cut(s) 235, 883
MabI ACCWGGT 1 cut(s) 923
MaeI CTAG 3 cut(s) 443, 483, 876
MaeII ACGT 2 cut(s) 1067, 1137
MaeIII GTNAC 3 cut(s) 308, 593, 635
MalI GATC 8 cut(s) 39, 123, 231, 535, 795, 883, 963, 974
MboI GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
MboII GAAGA 6 cut(s) 48, 193, 740, 891, 998, 1248
MflI RGATCY 4 cut(s) 37, 121, 881, 961
MhlI GDGCHC 3 cut(s) 442, 543, 1019
MluCI AATT 5 cut(s) 110, 330, 581, 711, 1123
MlyI GAGTC 4 cut(s) 219, 959, 1179, 1275
MroXI GAANNNNTTC 1 cut(s) 1250
MseI TTAA 5 cut(s) 189, 467, 774, 929, 1134
MslI CAYNNNNRTG 1 cut(s) 747
MspI CCGG 4 cut(s) 566, 1031, 1130, 1256
MspR9I CCNGG 2 cut(s) 925, 1256
MvaI CCWGG 1 cut(s) 925
MvnI CGCG 1 cut(s) 599
MwoI GCNNNNNNNGC 4 cut(s) 74, 625, 667, 1170
NciI CCSGG 1 cut(s) 1256
NcoI CCATGG 1 cut(s) 10
NdeII GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
NlaIV GGNNCC 4 cut(s) 564, 606, 817, 922
NsbI TGCGCA 1 cut(s) 1228
NspI RCATGY 3 cut(s) 373, 626, 902
PaeI GCATGC 1 cut(s) 373
PaeR7I CTCGAG 1 cut(s) 32
PagI TCATGA 1 cut(s) 1201
PciI ACATGT 2 cut(s) 622, 898
PdmI GAANNNNTTC 1 cut(s) 1250
PfeI GAWTC 4 cut(s) 343, 475, 647, 1205
PkrI GCNGC 3 cut(s) 131, 1099, 1226
PleI GAGTC 4 cut(s) 218, 958, 1179, 1275
PpsI GAGTC 4 cut(s) 218, 958, 1179, 1275
PpuMI RGGWCCY 1 cut(s) 816
PscI ACATGT 2 cut(s) 622, 898
PshBI ATTAAT 2 cut(s) 189, 774
Psp124BI GAGCTC 1 cut(s) 1019
Psp1406I AACGTT 2 cut(s) 1067, 1137
Psp5II RGGWCCY 1 cut(s) 816
Psp6I CCWGG 1 cut(s) 923
PspGI CCWGG 1 cut(s) 923
PspN4I GGNNCC 4 cut(s) 564, 606, 817, 922
PspPI GGNCC 1 cut(s) 816
PspPPI RGGWCCY 1 cut(s) 816
PspXI VCTCGAGB 1 cut(s) 32
PsrI GAACNNNNNNTAC 2 cut(s) 567, 599
PsuI RGATCY 4 cut(s) 37, 121, 881, 961
RsaI GTAC 2 cut(s) 164, 910
RsaNI GTAC 2 cut(s) 163, 909
RseI CAYNNNNRTG 1 cut(s) 747
SacI GAGCTC 1 cut(s) 1019
SaqAI TTAA 5 cut(s) 189, 467, 774, 929, 1134
SatI GCNGC 3 cut(s) 130, 1098, 1225
Sau3AI GATC 8 cut(s) 37, 121, 229, 533, 793, 881, 961, 972
Sau96I GGNCC 1 cut(s) 816
ScaI AGTACT 1 cut(s) 164
SchI GAGTC 4 cut(s) 219, 959, 1179, 1275
ScrFI CCNGG 2 cut(s) 925, 1256
SduI GDGCHC 3 cut(s) 442, 543, 1019
SexAI ACCWGGT 1 cut(s) 923
SfaNI GCATC 2 cut(s) 235, 883
Sfr274I CTCGAG 1 cut(s) 32
SinI GGWCC 1 cut(s) 816
SlaI CTCGAG 1 cut(s) 32
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 2 cut(s) 32, 1283
SmoI CTYRAG 2 cut(s) 32, 1283
SpeI ACTAGT 1 cut(s) 482
SphI GCATGC 1 cut(s) 373
Sse9I AATT 5 cut(s) 110, 330, 581, 711, 1123
SsiI CCGC 1 cut(s) 66
SspMI CTAG 3 cut(s) 443, 483, 876
SstI GAGCTC 1 cut(s) 1019
StyD4I CCNGG 2 cut(s) 923, 1254
StyI CCWWGG 2 cut(s) 10, 827
TaaI ACNGT 2 cut(s) 254, 839
TaiI ACGT 2 cut(s) 1070, 1140
TaqI TCGA 6 cut(s) 33, 61, 138, 720, 971, 1013
TaqII GACCGA 1 cut(s) 1197
TasI AATT 5 cut(s) 110, 330, 581, 711, 1123
TatI WGTACW 2 cut(s) 162, 908
TfiI GAWTC 4 cut(s) 343, 475, 647, 1205
Tru1I TTAA 5 cut(s) 189, 467, 774, 929, 1134
Tru9I TTAA 5 cut(s) 189, 467, 774, 929, 1134
TscAI CASTG 4 cut(s) 543, 616, 814, 940
TseI GCWGC 3 cut(s) 129, 1097, 1224
TspDTI ATGAA 9 cut(s) 161, 207, 211, 487, 588, 741, 765, 1158, 1218
TspRI CASTG 4 cut(s) 543, 616, 814, 940
VneI GTGCAC 2 cut(s) 438, 539
VpaK11BI GGWCC 1 cut(s) 816
VspI ATTAAT 2 cut(s) 189, 774
XapI RAATTY 2 cut(s) 110, 330
XbaI TCTAGA 1 cut(s) 875
XceI RCATGY 3 cut(s) 373, 626, 902
XhoI CTCGAG 1 cut(s) 32
XmnI GAANNNNTTC 1 cut(s) 1250
XspI CTAG 3 cut(s) 443, 483, 876
ZrmI AGTACT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.