AT1G30860

protein binding, zinc ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0020217
Physical Location & Seq
Reverse (-)
10986496 .. 10989593
3098 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G30860.1

Sequence Viewer

Length: 2193 bp
ATGGTGTCTTCTCCTCAGAGATTCGGTTTAATCTTAAGAGATCGTAACCAAAACGCTGGCGTTTTTCAAAAGAATCTGAAATCTCCGGTGAAAGAGGTTTTGAAATCTCATGTCTCCGATGAGAATTTAGTTGATTCTTGGATCGAAACTCACAATAACAAGAACAATCGTGTTCTTGAATCTCCGTTAGAATCGAAGAGAAACGACAATCTTGTGGCTTCTTCTTTGGTTCAGATATGGGAGGCGAGGCTAAACCGATCCAACGGTGGAAACTCGCCGAGTAGCAGTCAATCTACGGCGAGTAGTAGTAGTCGGAGCGATTCAGGAGTTAGTGTTCAAGATTCCGGTCTTTCAGAATCTTCATCAATCGATGGAGATTCTGAAATTGCTGATCGAACGGTGGAGATTGAATCTAGGTCACATGGTTTGGTTTCTGATTCCGGAGAAAGTAAATGGGGACGAGTCGCTGACCTAATTCGGAGGCTTAGCAACGAAGACAAGAAACGAACCGCTGGAGATAATGGCAGCGGCGGTGGCGGTGGACTCGAGATTATCAGAACGCCGAGGCCTTATTGCACTTCGTCGTCATCGGAGAAAAGTAATTTTCCGGTGGTTAGTTTCTCTCCGAAGATACGAGGACGACAAGCGTTTACCGATTTTCTTATGCAAATGGAACGTGATCGCCACCGTGAATTGGATTCGCTTTTTGAACGCAACGCAGTTTCTAGGTTTACTCAACGTGGTCGTCTCCAGTCAATGCTAAGGTTAAGGAACCTCAATCGCTGTCTTGTGATTCAAGATAGAAACCGGTCTAACGCAAAAACAACCGGATTAAACCGAATTGAATCAGGCTCTGCTGTTCTGCATTTAAGGGAGAAATTTCATGCGAACGTAGTAAACTCTGCGGCTGCAACAGATAAGAGGAAGAATCATCAACGATCCACTGAGATGAACAACAAATCCGTAGAAGAAACAGAAGGAACTACTACCACAAGCACGAGGTTAAAGGATGGTGGTGTTACTCTCGAAGCTTTTTTCGCAGAGCGGTTGAGACCCCGTAACCGCAAGATAGAGGAAGCAACGTTATGTAAGGAAGAAGAATCTGTAAGTGGAACAGTTGATTCACAAAAGAATTGCCTTCAGCTGCAAGAAACAAGAGAAGTAGAAGAAACTTGCAACGATGGCAAGTCTGAAAAGAAAGAAGAAGAAAATACTAGCCCGAGTGAATATTTATCTCGAGAATCGCGGTTGAGACAGAATCAAGACGAGAACAATGTGGGAAAGTATATGCAAGAAACTCGAGAAACAGAAGGTCTAGTTCATGAGAGTAATGAGATGGACCAGTGCCTTGATCAACAAGAAACATCCTATTTGAATAGATGGGGAGAACAAGAAGAGTATGCAGATGAGCAGTCTTATTATGGAGAATATAACGACGACTGGCTTAGTGAAATAGCTAGGCCTCGGAGTTACTGGGAGGAATTGAGGAAGTCACGGTACCTGGAAGTAATGAACACTAGGTCTGAGAAAGATGACATATGCAGACTCCTTGAGCGAAGAACGGTGACAGATTTCCTCGACAGCGGGTTGCGAGAGAAGATCGATAATCTCATGATGTCCCGTGTACAGACACACTCGGATAAGCACTCCAAAAAATGGGAATTGCAACAAGAAGAAGAGGAGGAAGTAAATTTTGAAATTGATGAAGAAATCAAAGAAGAGCCATTAAGAGGAGGTGAAGAGCAAGATGATAGAGATGACTTGAGCCAATCGTCGTCTTCACATATATCTGCATCGTCTCCTGCAGGATCATGGAGTTCTCAAGACACTGATGTTACTTCCACTCCTGCCTTGGTTGTTCAGAATCCTCAGTCACCTGAAATGGAGCTGATAAGCGGTATGAGATCACAGATCCAACAGCTTCAGCAAGAAATGTCAGTACTACGAGATTCTGTCAAAACGTGTTTAGATGCTAACGCGAGCTTGCAACACAAGGCTCACCAAGAAAACCCAATGAAACGAAAATGCTGCGTCTGCGACGAAACACAGGTCGAGGCGGTTTTGTACAGGTGTGGACATATGTGCATGTGCCTAAAATGTGCCAACGAACTACATTGGAGTGGAGGGAAATGTCCGATTTGCAGAGCTCAGATTGTTGACGTTGTTCGTGTCATCTACGATACAAGAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

730

Amino Acids

83.02

Weight (kDa)

5.35

Isoelectric Point (pI)

68.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 673 - 720 2.3e-12 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0020217)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30860 AT2G34920 AT4G20160 AT4G20160 AT4G20160 AT5G44690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1497
AccB1I GGYRCC 1 cut(s) 1497
AccB7I CCANNNNNTGG 1 cut(s) 1656
AccBSI CCGCTC 1 cut(s) 1045
AccII CGCG 2 cut(s) 1246, 1979
AccIII TCCGGA 1 cut(s) 440
AclI AACGTT 1 cut(s) 1082
AclWI GGATC 5 cut(s) 149, 252, 933, 1816, 1906
AcsI RAATTY 3 cut(s) 124, 878, 1690
AcuI CTGAAG 2 cut(s) 1124, 1907
AfaI GTAC 4 cut(s) 1499, 1626, 1941, 2066
AfiI CCNNNNNNNGG 3 cut(s) 694, 1656, 1730
AflII CTTAAG 1 cut(s) 34
AflIII ACRYGT 1 cut(s) 1961
AgeI ACCGGT 1 cut(s) 807
AjnI CCWGG 1 cut(s) 1500
AloI GAACNNNNNNTCC 4 cut(s) 318, 350, 944, 976
AluBI AGCT 7 cut(s) 1031, 1144, 1457, 1888, 1921, 1983, 2147
AluI AGCT 7 cut(s) 1031, 1144, 1457, 1888, 1921, 1983, 2147
Alw21I GWGCWC 1 cut(s) 2149
Alw26I GTCTC 5 cut(s) 118, 752, 1045, 1246, 1803
AlwI GGATC 5 cut(s) 149, 252, 933, 1816, 1906
AlwNI CAGNNNCTG 1 cut(s) 854
Ama87I CYCGRG 4 cut(s) 545, 1219, 1236, 1299
Aor13HI TCCGGA 1 cut(s) 440
AoxI GGCC 2 cut(s) 566, 1460
ApeKI GCWGC 4 cut(s) 525, 908, 1144, 2028
ApoI RAATTY 3 cut(s) 124, 878, 1690
ArsI GACNNNNNNTTYG 2 cut(s) 2034, 2066
AsiGI ACCGGT 1 cut(s) 807
Asp718I GGTACC 1 cut(s) 1497
AspS9I GGNCC 1 cut(s) 1339
AsuHPI GGTGA 5 cut(s) 100, 1576, 1748, 1866, 1991
AvaI CYCGRG 4 cut(s) 545, 1219, 1236, 1299
AvaII GGWCC 1 cut(s) 1339
BanI GGYRCC 1 cut(s) 1497
BanII GRGCYC 1 cut(s) 2149
BarI GAAGNNNNNNTAC 2 cut(s) 1481, 1513
BauI CACGAG 1 cut(s) 997
BbsI GAAGAC 2 cut(s) 501, 1770
Bbv12I GWGCWC 1 cut(s) 2149
BbvI GCAGC 4 cut(s) 537, 895, 1131, 2015
BccI CCATC 5 cut(s) 365, 1004, 1175, 1330, 1374
BceAI ACGGC 1 cut(s) 312
BcgI CGANNNNNNTGC 4 cut(s) 1280, 1314, 2010, 2044
BciT130I CCWGG 1 cut(s) 1502
BclI TGATCA 1 cut(s) 1351
BcoDI GTCTC 5 cut(s) 118, 752, 1045, 1246, 1803
BfaI CTAG 6 cut(s) 414, 726, 1215, 1316, 1458, 1518
BfmI CTRYAG 1 cut(s) 1803
BfrI CTTAAG 1 cut(s) 34
BisI GCNGC 6 cut(s) 526, 529, 906, 909, 1145, 2029
BlpI GCTNAGC 1 cut(s) 485
BlsI GCNGC 6 cut(s) 527, 530, 907, 910, 1146, 2030
BmcAI AGTACT 1 cut(s) 1941
Bme1390I CCNGG 1 cut(s) 1502
Bme18I GGWCC 1 cut(s) 1339
BmeT110I CYCGRG 4 cut(s) 545, 1219, 1236, 1299
BmgT120I GGNCC 1 cut(s) 1339
BmiI GGNNCC 2 cut(s) 773, 1499
BmrFI CCNGG 1 cut(s) 1502
BmrI ACTGGG 1 cut(s) 1483
BmsI GCATC 2 cut(s) 1802, 1960
BmuI ACTGGG 1 cut(s) 1483
BpiI GAAGAC 2 cut(s) 501, 1770
BpmI CTGGAG 2 cut(s) 534, 734
Bpu10I CCTNAGC 1 cut(s) 761
Bpu1102I GCTNAGC 1 cut(s) 485
BpuEI CTTGAG 3 cut(s) 1571, 1783, 1806
Bsa29I ATCGAT 2 cut(s) 369, 1602
BsaI GGTCTC 1 cut(s) 1045
BsaJI CCNNGG 3 cut(s) 563, 1463, 1851
BsaWI WCCGGW 6 cut(s) 85, 344, 440, 607, 807, 827
BsaXI ACNNNNNCTCC 4 cut(s) 318, 348, 1828, 1858
Bsc4I CCNNNNNNNGG 3 cut(s) 694, 1656, 1730
Bse118I RCCGGY 1 cut(s) 807
Bse1I ACTGG 4 cut(s) 751, 1342, 1445, 1478
BseAI TCCGGA 1 cut(s) 440
BseBI CCWGG 1 cut(s) 1502
BseCI ATCGAT 2 cut(s) 369, 1602
BseDI CCNNGG 3 cut(s) 563, 1463, 1851
BseGI GGATG 2 cut(s) 1015, 1364
BseLI CCNNNNNNNGG 3 cut(s) 694, 1656, 1730
BseMII CTCAG 5 cut(s) 29, 936, 1515, 1883, 2162
BseNI ACTGG 4 cut(s) 751, 1342, 1445, 1478
BseRI GAGGAG 2 cut(s) 1694, 1746
BseXI GCAGC 4 cut(s) 537, 895, 1131, 2015
Bsh1236I CGCG 2 cut(s) 1246, 1979
BshFI GGCC 2 cut(s) 568, 1462
BshNI GGYRCC 1 cut(s) 1497
BshTI ACCGGT 1 cut(s) 807
BshVI ATCGAT 2 cut(s) 369, 1602
BsiHKAI GWGCWC 1 cut(s) 2149
BsiHKCI CYCGRG 4 cut(s) 545, 1219, 1236, 1299
BsiSI CCGG 6 cut(s) 86, 345, 441, 608, 808, 828
BslFI GGGAC 2 cut(s) 471, 1603
BslI CCNNNNNNNGG 3 cut(s) 694, 1656, 1730
BsmAI GTCTC 5 cut(s) 118, 752, 1045, 1246, 1803
BsmBI CGTCTC 2 cut(s) 752, 1803
BsmFI GGGAC 2 cut(s) 471, 1603
BsnI GGCC 2 cut(s) 568, 1462
Bso31I GGTCTC 1 cut(s) 1045
BsoBI CYCGRG 4 cut(s) 545, 1219, 1236, 1299
Bsp1286I GDGCHC 1 cut(s) 2149
Bsp13I TCCGGA 1 cut(s) 440
Bsp1407I TGTACA 2 cut(s) 1624, 2064
Bsp1720I GCTNAGC 1 cut(s) 485
BspANI GGCC 2 cut(s) 568, 1462
BspCNI CTCAG 5 cut(s) 28, 937, 1516, 1882, 2161
BspDI ATCGAT 2 cut(s) 369, 1602
BspEI TCCGGA 1 cut(s) 440
BspFNI CGCG 2 cut(s) 1246, 1979
BspHI TCATGA 2 cut(s) 1321, 1611
BspLI GGNNCC 2 cut(s) 773, 1499
BspMAI CTGCAG 1 cut(s) 1807
BspPI GGATC 5 cut(s) 149, 252, 933, 1816, 1906
BspQI GCTCTTC 2 cut(s) 1713, 1734
BspT107I GGYRCC 1 cut(s) 1497
BspTI CTTAAG 1 cut(s) 34
BspTNI GGTCTC 1 cut(s) 1045
BsrBI CCGCTC 1 cut(s) 1045
BsrFI RCCGGY 1 cut(s) 807
BsrGI TGTACA 2 cut(s) 1624, 2064
BsrI ACTGG 4 cut(s) 751, 1342, 1445, 1478
BssAI RCCGGY 1 cut(s) 807
BssECI CCNNGG 3 cut(s) 563, 1463, 1851
BssSI CACGAG 1 cut(s) 997
BssT1I CCWWGG 1 cut(s) 1851
Bst2BI CACGAG 1 cut(s) 997
Bst2UI CCWGG 1 cut(s) 1502
Bst4CI ACNGT 6 cut(s) 266, 400, 689, 1117, 1497, 1564
Bst6I CTCTTC 5 cut(s) 191, 1389, 1671, 1713, 1734
BstAFI CTTAAG 1 cut(s) 34
BstAUI TGTACA 2 cut(s) 1624, 2064
BstC8I GCNNGC 3 cut(s) 58, 1981, 1985
BstDEI CTNAG 8 cut(s) 15, 485, 761, 945, 1445, 1524, 1869, 2148
BstF5I GGATG 2 cut(s) 1015, 1364
BstFNI CGCG 2 cut(s) 1246, 1979
BstMAI GTCTC 5 cut(s) 118, 752, 1045, 1246, 1803
BstMWI GCNNNNNNNGC 4 cut(s) 534, 1037, 1182, 2034
BstNI CCWGG 1 cut(s) 1502
BstNSI RCATGY 1 cut(s) 2089
BstSCI CCNGG 1 cut(s) 1500
BstSFI CTRYAG 1 cut(s) 1803
BstUI CGCG 2 cut(s) 1246, 1979
BstV1I GCAGC 4 cut(s) 537, 895, 1131, 2015
BstV2I GAAGAC 2 cut(s) 501, 1770
BstX2I RGATCY 1 cut(s) 1911
BstXI CCANNNNNNTGG 1 cut(s) 56
BstYI RGATCY 1 cut(s) 1911
Bsu15I ATCGAT 2 cut(s) 369, 1602
BsuRI GGCC 2 cut(s) 568, 1462
BsuTUI ATCGAT 2 cut(s) 369, 1602
BtsCI GGATG 2 cut(s) 1015, 1364
BtsIMutI CAGTG 3 cut(s) 942, 1349, 1827
Cac8I GCNNGC 3 cut(s) 58, 1981, 1985
CaiI CAGNNNCTG 1 cut(s) 854
CciI TCATGA 2 cut(s) 1321, 1611
Cfr10I RCCGGY 1 cut(s) 807
Cfr13I GGNCC 1 cut(s) 1339
ClaI ATCGAT 2 cut(s) 369, 1602
CseI GACGC 1 cut(s) 2020
Csp6I GTAC 4 cut(s) 1498, 1625, 1940, 2065
CspAI ACCGGT 1 cut(s) 807
CviAII CATG 7 cut(s) 110, 422, 884, 1322, 1612, 1812, 2086
CviQI GTAC 4 cut(s) 1498, 1625, 1940, 2065
DdeI CTNAG 8 cut(s) 15, 485, 761, 945, 1445, 1524, 1869, 2148
Eam1104I CTCTTC 5 cut(s) 191, 1389, 1671, 1713, 1734
EarI CTCTTC 5 cut(s) 191, 1389, 1671, 1713, 1734
Ecl136II GAGCTC 1 cut(s) 2147
Eco130I CCWWGG 1 cut(s) 1851
Eco147I AGGCCT 2 cut(s) 568, 1462
Eco24I GRGCYC 1 cut(s) 2149
Eco31I GGTCTC 1 cut(s) 1045
Eco47I GGWCC 1 cut(s) 1339
Eco53kI GAGCTC 1 cut(s) 2147
Eco57I CTGAAG 2 cut(s) 1124, 1907
Eco88I CYCGRG 4 cut(s) 545, 1219, 1236, 1299
EcoICRI GAGCTC 1 cut(s) 2147
EcoRII CCWGG 1 cut(s) 1500
EcoT14I CCWWGG 1 cut(s) 1851
EcoT38I GRGCYC 1 cut(s) 2149
ErhI CCWWGG 1 cut(s) 1851
Esp3I CGTCTC 2 cut(s) 752, 1803
FaeI CATG 7 cut(s) 113, 425, 887, 1325, 1615, 1815, 2089
FaqI GGGAC 2 cut(s) 471, 1603
FatI CATG 7 cut(s) 109, 421, 883, 1321, 1611, 1811, 2085
FauI CCCGC 1 cut(s) 1577
FauNDI CATATG 2 cut(s) 1538, 2079
FbaI TGATCA 1 cut(s) 1351
Fnu4HI GCNGC 6 cut(s) 526, 529, 906, 909, 1145, 2029
FokI GGATG 2 cut(s) 1022, 1351
FriOI GRGCYC 1 cut(s) 2149
Fsp4HI GCNGC 6 cut(s) 526, 529, 906, 909, 1145, 2029
FspBI CTAG 6 cut(s) 414, 726, 1215, 1316, 1458, 1518
GluI GCNGC 6 cut(s) 526, 529, 906, 909, 1145, 2029
GsuI CTGGAG 2 cut(s) 534, 734
HaeIII GGCC 2 cut(s) 568, 1462
HapII CCGG 6 cut(s) 86, 345, 441, 608, 808, 828
HgaI GACGC 1 cut(s) 2020
Hin1II CATG 7 cut(s) 113, 425, 887, 1325, 1615, 1815, 2089
HincII GTYRAC 1 cut(s) 2158
HindII GTYRAC 1 cut(s) 2158
HindIII AAGCTT 1 cut(s) 1029
HpaII CCGG 6 cut(s) 86, 345, 441, 608, 808, 828
HphI GGTGA 5 cut(s) 100, 1576, 1748, 1866, 1991
Hpy166II GTNNAC 7 cut(s) 542, 651, 732, 898, 1625, 2075, 2158
Hpy8I GTNNAC 7 cut(s) 542, 651, 732, 898, 1625, 2075, 2158
Hpy99I CGWCG 4 cut(s) 586, 1439, 1777, 2042
HpyAV CCTTC 3 cut(s) 971, 1148, 1304
HpyCH4III ACNGT 6 cut(s) 266, 400, 689, 1117, 1497, 1564
HpyCH4IV ACGT 6 cut(s) 676, 739, 891, 1082, 1961, 2160
HpyF10VI GCNNNNNNNGC 4 cut(s) 534, 1037, 1182, 2034
HpyF3I CTNAG 8 cut(s) 15, 485, 761, 945, 1445, 1524, 1869, 2148
HpySE526I ACGT 6 cut(s) 676, 739, 891, 1082, 1961, 2160
Hsp92II CATG 7 cut(s) 113, 425, 887, 1325, 1615, 1815, 2089
Kpn2I TCCGGA 1 cut(s) 440
KpnI GGTACC 1 cut(s) 1501
Ksp22I TGATCA 1 cut(s) 1351
LguI GCTCTTC 2 cut(s) 1713, 1734
LmnI GCTCC 2 cut(s) 315, 1885
Lsp1109I GCAGC 4 cut(s) 537, 895, 1131, 2015
LweI GCATC 2 cut(s) 1802, 1960
MaeI CTAG 6 cut(s) 414, 726, 1215, 1316, 1458, 1518
MaeII ACGT 6 cut(s) 676, 739, 891, 1082, 1961, 2160
MaeIII GTNAC 9 cut(s) 44, 417, 1018, 1058, 1469, 1491, 1564, 1834, 1872
MbiI CCGCTC 1 cut(s) 1045
MflI RGATCY 1 cut(s) 1911
MhlI GDGCHC 1 cut(s) 2149
MlyI GAGTC 3 cut(s) 471, 537, 1539
MmeI TCCRAC 3 cut(s) 285, 293, 1939
MroI TCCGGA 1 cut(s) 440
MseI TTAA 7 cut(s) 29, 35, 767, 833, 869, 1004, 1727
MslI CAYNNNNRTG 2 cut(s) 947, 2118
MspA1I CMGCKG 4 cut(s) 512, 528, 1144, 1584
MspCI CTTAAG 1 cut(s) 34
MspI CCGG 6 cut(s) 86, 345, 441, 608, 808, 828
MspR9I CCNGG 1 cut(s) 1502
MvaI CCWGG 1 cut(s) 1502
MvnI CGCG 2 cut(s) 1246, 1979
MwoI GCNNNNNNNGC 4 cut(s) 534, 1037, 1182, 2034
NdeI CATATG 2 cut(s) 1538, 2079
NlaIII CATG 7 cut(s) 113, 425, 887, 1325, 1615, 1815, 2089
NlaIV GGNNCC 2 cut(s) 773, 1499
NmeAIII GCCGAG 2 cut(s) 303, 588
NmuCI GTSAC 4 cut(s) 417, 1491, 1564, 1872
NspI RCATGY 1 cut(s) 2089
PaeR7I CTCGAG 3 cut(s) 545, 1236, 1299
PagI TCATGA 2 cut(s) 1321, 1611
PceI AGGCCT 2 cut(s) 568, 1462
PciSI GCTCTTC 2 cut(s) 1713, 1734
PflMI CCANNNNNTGG 1 cut(s) 1656
PinAI ACCGGT 1 cut(s) 807
PkrI GCNGC 6 cut(s) 527, 530, 907, 910, 1146, 2030
PleI GAGTC 3 cut(s) 470, 537, 1539
PpsI GAGTC 3 cut(s) 470, 537, 1539
Psp124BI GAGCTC 1 cut(s) 2149
Psp1406I AACGTT 1 cut(s) 1082
Psp6I CCWGG 1 cut(s) 1500
PspGI CCWGG 1 cut(s) 1500
PspN4I GGNNCC 2 cut(s) 773, 1499
PspPI GGNCC 1 cut(s) 1339
PstI CTGCAG 1 cut(s) 1807
PstNI CAGNNNCTG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 1911
PvuII CAGCTG 1 cut(s) 1144
RsaI GTAC 4 cut(s) 1499, 1626, 1941, 2066
RsaNI GTAC 4 cut(s) 1498, 1625, 1940, 2065
RseI CAYNNNNRTG 2 cut(s) 947, 2118
SacI GAGCTC 1 cut(s) 2149
SapI GCTCTTC 2 cut(s) 1713, 1734
SaqAI TTAA 7 cut(s) 29, 35, 767, 833, 869, 1004, 1727
SatI GCNGC 6 cut(s) 526, 529, 906, 909, 1145, 2029
Sau96I GGNCC 1 cut(s) 1339
SbfI CCTGCAGG 1 cut(s) 1807
ScaI AGTACT 1 cut(s) 1941
SchI GAGTC 3 cut(s) 471, 537, 1539
ScrFI CCNGG 1 cut(s) 1502
SdaI CCTGCAGG 1 cut(s) 1807
SduI GDGCHC 1 cut(s) 2149
SfaNI GCATC 2 cut(s) 1802, 1960
SfcI CTRYAG 1 cut(s) 1803
Sfr274I CTCGAG 3 cut(s) 545, 1236, 1299
SinI GGWCC 1 cut(s) 1339
SlaI CTCGAG 3 cut(s) 545, 1236, 1299
SmiMI CAYNNNNRTG 2 cut(s) 947, 2118
SmlI CTYRAG 7 cut(s) 34, 545, 1236, 1299, 1550, 1762, 1821
SmoI CTYRAG 7 cut(s) 34, 545, 1236, 1299, 1550, 1762, 1821
Sse8387I CCTGCAGG 1 cut(s) 1807
SseBI AGGCCT 2 cut(s) 568, 1462
SspI AATATT 1 cut(s) 1229
SspMI CTAG 6 cut(s) 414, 726, 1215, 1316, 1458, 1518
SstI GAGCTC 1 cut(s) 2149
StuI AGGCCT 2 cut(s) 568, 1462
StyD4I CCNGG 1 cut(s) 1500
StyI CCWWGG 1 cut(s) 1851
TaaI ACNGT 6 cut(s) 266, 400, 689, 1117, 1497, 1564
TaiI ACGT 6 cut(s) 679, 742, 894, 1085, 1964, 2163
TatI WGTACW 3 cut(s) 1624, 1939, 2064
TauI GCSGC 2 cut(s) 531, 908
Tru1I TTAA 7 cut(s) 29, 35, 767, 833, 869, 1004, 1727
Tru9I TTAA 7 cut(s) 29, 35, 767, 833, 869, 1004, 1727
TscAI CASTG 3 cut(s) 949, 1349, 1834
TseFI GTSAC 4 cut(s) 417, 1491, 1564, 1872
TseI GCWGC 4 cut(s) 525, 908, 1144, 2028
Tsp45I GTSAC 4 cut(s) 417, 1491, 1564, 1872
TspDTI ATGAA 7 cut(s) 351, 872, 965, 1310, 1526, 1719, 2030
TspGWI ACGGA 2 cut(s) 174, 952
TspRI CASTG 3 cut(s) 949, 1349, 1834
Van91I CCANNNNNTGG 1 cut(s) 1656
Vha464I CTTAAG 1 cut(s) 34
VpaK11BI GGWCC 1 cut(s) 1339
XapI RAATTY 3 cut(s) 124, 878, 1690
XceI RCATGY 1 cut(s) 2089
XcmI CCANNNNNNNNNTGG 1 cut(s) 1849
XhoI CTCGAG 3 cut(s) 545, 1236, 1299
XspI CTAG 6 cut(s) 414, 726, 1215, 1316, 1458, 1518
ZrmI AGTACT 1 cut(s) 1941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.