AT2G34920

protein binding, zinc ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0020217
Physical Location & Seq
Reverse (-)
14728027 .. 14731255
3229 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G34920.1

Sequence Viewer

Length: 1959 bp
ATGGCCTCGTTACGACCTAGTTTTGGATCTGTTCTTAGAGATCGCAACCAACGGCACAATGACGATGTTGTTTTCAAGAAGAATCTGAAAGCTCAAGTGAAAACTGCTCCTCCGGCCATCTCCGACGAGAGCTCGGAGAACAGAGTTGATTCTTTGATCGGAAACAAGCGGAAAAAGAACAATAAAAGCCGTCCTGGATCGCCGGAGAAACCACGGACTAGAAAAGGAAACAACTTTTCCGACAATCTTGGAGGAGCTTCTTCTCTTGTGCAGATATGGGAGGCGAGGCTAAATCGATCCAACGGCGGAAACTCGGCTATCCATAGCCAATCAATAGAGATCAGCTCAGAAGCGAGCGTTCAAGAAATACACCTTTTAGCTCCATCCATCGACGGAGAATCTGAATCAGAGAACGAATCCAAGAGTCCTGATCAGACGGTGGAGATTGAATCTGGGACTCTCAATTCGGTTTCTGATATTATCCGGAGATTGAGTAACGAACAGAAGCTAACCGCCAGCAATAATGGCGGTGCAGTCGATATGCCGATCGTTAAAACGCCGACGCTGGAGAAAAGCAGTTTTCAGGTGGTTACTTGCTCTCCGCGAATTCGAGGAAGGCAAGCTTACTCCGATCTGCTTGTGCATCTGGAACGCGAACGTCACCGCGAATTGGAATCACTTCTTGGACGCAACGCAGTTTCTAGGTTTCCTCAACGTGGTCGCCTCCAGTCAATGTTGCGGCTAAGGAGTCTCAAACGCGGCCTAGCGATTCAAGATCGTCATCGTGGTACCACAAAAAGCGATTTGAATCGCTTCCAACCTAGTTCTACAATTCTCCATCTAAGAGAAAAACTCCGGGAAAAAGCAGCAAACGCTGCCGCTGAAGCCGGACTAAAGAAGGGTCAACAATCCACCGTAGAAACAGAGAGCATGCAGTCAAAAGAAACCAGTGGTATTCTTCATTCTCCTTCTACAGAGCGGTTAAGTCCTCAAAAACGCAACATAGAGGAAGCAATCTTACGCAAGAACGAAACTGAAACCAAAATGAGTTACCTTCAGCTGAAAAAAGCCATAGTAGCAGAAGTATTGGAAAGAGAATCTGATAACACTAGTCCTCTCACCAGCGTAACTCCTCAAGAACCGCGGATACTAAGGAACGAGGAAGCGGGGAAACTAGAAAGCGGTACAGAGGGAACTCAAGAGACACCGTTCCTTGAGACACAAGAAATGTCATTCCAAAGCGGATGGGAAGAGCAAGAAGAGTATGAGGATGAGCAGTCTTATTACGGAGACATGAGCTATGACTGGTTTACAGAAATATCTAGGCCTCGGACTTATTGGGAAGATCTGAGGAAATCTCGGTATCTGGAAGTGATGAACACTAAATCTGACAAGGACGATATATGCAGACTTCTTGAGAGAAGAACGGTTTCGGGTTTCCTCCAAAGCGGATTACGAGAGAAGATCGATAAGCTCATAATGTCCCGTGTTCAGATACATCCGGCTCACCGGATTGAAGAAGCAACTAAAGAGGAAGAGAAATATGACATAGGAGAAGAAAAAGATGAAGACAGAGATGACTTGAGCCAATCATCATCACAGATATTTGCACCGTCTCCGGCAGGATCATGGAGTTCTCTGGACACAGGAGTTACTTCCACACCAACGCACAATCTTCATTCCACTCTCCAACTAGAAATGTCTGAGCTACGAGACTCTGTCAAAACGTGTTTGGACGTCAATGCTAGCCTTCAAAAGTCGGTTCACCTGGAAAATCCCTTTAAACGCAAATGCTGCGTTTGTAACGAAACGCAAGTTGAAACACTTTTATACAGGTGTGGGCACATGTGCACATGCCTGAGATGCGCAAACGAACTACAATATAATGGCGGGAAATGCCCGATTTGTCATGCCAAGATTCTAGACGTTGTTCGCGTTTTCGTCGATTCAAGAACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000209 GO:0001654 GO:0001709 GO:0002009 GO:0002064 GO:0002065 GO:0002066 GO:0002165 GO:0002682 GO:0002683 GO:0003002 GO:0003006 GO:0003008 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006464 GO:0006807 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007389 GO:0007398 GO:0007399 GO:0007422 GO:0007423 GO:0007444 GO:0007472 GO:0007476 GO:0007498 GO:0007552 GO:0007560 GO:0007610 GO:0007611 GO:0007613 GO:0007616 GO:0008052 GO:0008104 GO:0008150 GO:0008152 GO:0008270 GO:0008289 GO:0008356 GO:0008593 GO:0009653 GO:0009791 GO:0009886 GO:0009887 GO:0009888 GO:0009966 GO:0009967 GO:0009987 GO:0010160 GO:0010646 GO:0010647 GO:0016020 GO:0016043 GO:0016360 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019827 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023056 GO:0030154 GO:0030707 GO:0030718 GO:0030855 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0035091 GO:0035107 GO:0035114 GO:0035120 GO:0035203 GO:0035204 GO:0035220 GO:0035239 GO:0035295 GO:0036211 GO:0042478 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043412 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0045165 GO:0045314 GO:0045595 GO:0045596 GO:0045610 GO:0045611 GO:0045613 GO:0045614 GO:0045664 GO:0045747 GO:0046532 GO:0046872 GO:0046914 GO:0048468 GO:0048471 GO:0048477 GO:0048513 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048563 GO:0048569 GO:0048580 GO:0048581 GO:0048583 GO:0048584 GO:0048609 GO:0048645 GO:0048646 GO:0048699 GO:0048707 GO:0048729 GO:0048731 GO:0048736 GO:0048737 GO:0048749 GO:0048856 GO:0048859 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0050877 GO:0050890 GO:0051093 GO:0051179 GO:0051239 GO:0051241 GO:0051259 GO:0051260 GO:0051301 GO:0051704 GO:0051960 GO:0060284 GO:0060429 GO:0060562 GO:0060581 GO:0060582 GO:0061630 GO:0061659 GO:0065003 GO:0065007 GO:0070647 GO:0071704 GO:0071840 GO:0071944 GO:0098727 GO:0140096 GO:1901564 GO:1901981 GO:1903706 GO:1903707 GO:2000026 GO:2000027
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-C3HC4_3

Protein Analysis

652

Amino Acids

73.66

Weight (kDa)

6.61

Isoelectric Point (pI)

65.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-C3HC4_3 PF13920 595 - 642 1.1e-11 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020217)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30860 AT2G34920 AT4G20160 AT4G20160 AT4G20160 AT5G44690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1740
Acc16I TGCGCA 1 cut(s) 1867
Acc65I GGTACC 1 cut(s) 788
AccB1I GGYRCC 1 cut(s) 788
AccBSI CCGCTC 1 cut(s) 979
AccII CGCG 6 cut(s) 604, 654, 666, 759, 1144, 1935
AccIII TCCGGA 1 cut(s) 483
AclWI GGATC 4 cut(s) 34, 205, 291, 1633
AcoI YGGCCR 1 cut(s) 114
AcsI RAATTY 1 cut(s) 606
AcuI CTGAAG 2 cut(s) 903, 1040
AcyI GRCGYC 1 cut(s) 1737
AfaI GTAC 2 cut(s) 790, 1186
AfiI CCNNNNNNNGG 3 cut(s) 23, 670, 716
AflIII ACRYGT 2 cut(s) 1727, 1845
AgsI TTSAA 9 cut(s) 76, 362, 449, 773, 808, 1517, 1754, 1820, 1950
AhlI ACTAGT 1 cut(s) 1109
AjnI CCWGG 2 cut(s) 193, 1767
AjuI GAANNNNNNNTTGG 2 cut(s) 666, 698
Alw21I GWGCWC 2 cut(s) 134, 1853
Alw26I GTCTC 6 cut(s) 755, 1196, 1211, 1284, 1620, 1707
Alw44I GTGCAC 1 cut(s) 1849
AlwI GGATC 4 cut(s) 34, 205, 291, 1633
Aor13HI TCCGGA 1 cut(s) 483
AoxI GGCC 4 cut(s) 3, 114, 760, 1325
ApaLI GTGCAC 1 cut(s) 1849
ApeKI GCWGC 3 cut(s) 866, 875, 1794
ApoI RAATTY 1 cut(s) 606
ArsI GACNNNNNNTTYG 2 cut(s) 448, 480
Asp700I GAANNNNTTC 3 cut(s) 678, 812, 1429
Asp718I GGTACC 1 cut(s) 788
AspLEI GCGC 1 cut(s) 1868
AsuC2I CCSGG 1 cut(s) 857
AsuHPI GGTGA 4 cut(s) 653, 1111, 1499, 1757
AsuNHI GCTAGC 1 cut(s) 1745
BaeGI GKGCMC 2 cut(s) 1845, 1853
BanI GGYRCC 1 cut(s) 788
BanII GRGCYC 1 cut(s) 134
BarI GAAGNNNNNNTAC 2 cut(s) 1002, 1034
BbsI GAAGAC 1 cut(s) 1575
Bbv12I GWGCWC 2 cut(s) 134, 1853
BbvI GCAGC 3 cut(s) 862, 878, 1781
BccI CCATC 5 cut(s) 125, 391, 395, 846, 1239
BceAI ACGGC 3 cut(s) 68, 174, 319
BciT130I CCWGG 2 cut(s) 195, 1769
BciVI GTATCC 1 cut(s) 1140
BclI TGATCA 1 cut(s) 430
BcnI CCSGG 1 cut(s) 857
BcoDI GTCTC 6 cut(s) 755, 1196, 1211, 1284, 1620, 1707
BcuI ACTAGT 1 cut(s) 1109
BfmI CTRYAG 1 cut(s) 972
BfuI GTATCC 1 cut(s) 1140
BglII AGATCT 1 cut(s) 1345
BisI GCNGC 6 cut(s) 740, 760, 867, 876, 879, 1795
BlsI GCNGC 6 cut(s) 741, 761, 868, 877, 880, 1796
Bme1390I CCNGG 3 cut(s) 195, 857, 1769
BmiI GGNNCC 1 cut(s) 790
BmrFI CCNGG 3 cut(s) 195, 857, 1769
BmsI GCATC 2 cut(s) 652, 1853
BmtI GCTAGC 1 cut(s) 1749
BpiI GAAGAC 1 cut(s) 1575
BplI GAGNNNNNCTC 6 cut(s) 329, 361, 837, 869, 1342, 1374
BpmI CTGGAG 2 cut(s) 587, 710
Bpu10I CCTNAGC 1 cut(s) 743
BpuEI CTTGAG 6 cut(s) 78, 1119, 1182, 1235, 1436, 1603
BpuMI CCSGG 1 cut(s) 857
Bsa29I ATCGAT 2 cut(s) 295, 1467
BsaBI GATNNNNATC 2 cut(s) 780, 807
BsaHI GRCGYC 1 cut(s) 1737
BsaJI CCNNGG 3 cut(s) 212, 1142, 1328
BsaWI WCCGGW 2 cut(s) 483, 1509
BsaXI ACNNNNNCTCC 6 cut(s) 94, 124, 478, 508, 583, 613
Bsc4I CCNNNNNNNGG 3 cut(s) 23, 670, 716
Bse1I ACTGG 3 cut(s) 727, 948, 1310
Bse8I GATNNNNATC 2 cut(s) 780, 807
BseAI TCCGGA 1 cut(s) 483
BseBI CCWGG 2 cut(s) 195, 1769
BseCI ATCGAT 2 cut(s) 295, 1467
BseDI CCNNGG 3 cut(s) 212, 1142, 1328
BseGI GGATG 4 cut(s) 383, 1250, 1276, 1498
BseJI GATNNNNATC 2 cut(s) 780, 807
BseLI CCNNNNNNNGG 3 cut(s) 23, 670, 716
BseMII CTCAG 4 cut(s) 360, 1340, 1695, 1850
BseNI ACTGG 3 cut(s) 727, 948, 1310
BseRI GAGGAG 3 cut(s) 99, 267, 1122
BseSI GKGCMC 2 cut(s) 1845, 1853
BseXI GCAGC 3 cut(s) 862, 878, 1781
BsgI GTGCAG 2 cut(s) 290, 552
Bsh1236I CGCG 6 cut(s) 604, 654, 666, 759, 1144, 1935
Bsh1285I CGRYCG 1 cut(s) 549
BshFI GGCC 4 cut(s) 5, 116, 762, 1327
BshNI GGYRCC 1 cut(s) 788
BshVI ATCGAT 2 cut(s) 295, 1467
BsiEI CGRYCG 1 cut(s) 549
BsiHKAI GWGCWC 2 cut(s) 134, 1853
BsiSI CCGG 8 cut(s) 113, 203, 484, 856, 888, 1502, 1510, 1619
BslFI GGGAC 2 cut(s) 469, 1468
BslI CCNNNNNNNGG 3 cut(s) 23, 670, 716
BsmAI GTCTC 6 cut(s) 755, 1196, 1211, 1284, 1620, 1707
BsmBI CGTCTC 1 cut(s) 1620
BsmFI GGGAC 2 cut(s) 469, 1468
BsnI GGCC 4 cut(s) 5, 116, 762, 1327
Bsp1286I GDGCHC 3 cut(s) 134, 1845, 1853
Bsp13I TCCGGA 1 cut(s) 483
BspANI GGCC 4 cut(s) 5, 116, 762, 1327
BspCNI CTCAG 4 cut(s) 359, 1341, 1696, 1851
BspDI ATCGAT 2 cut(s) 295, 1467
BspEI TCCGGA 1 cut(s) 483
BspFNI CGCG 6 cut(s) 604, 654, 666, 759, 1144, 1935
BspLI GGNNCC 1 cut(s) 790
BspOI GCTAGC 1 cut(s) 1749
BspPI GGATC 4 cut(s) 34, 205, 291, 1633
BspQI GCTCTTC 1 cut(s) 1245
BspT107I GGYRCC 1 cut(s) 788
BsrBI CCGCTC 1 cut(s) 979
BsrI ACTGG 3 cut(s) 727, 948, 1310
BssECI CCNNGG 3 cut(s) 212, 1142, 1328
BssNI GRCGYC 1 cut(s) 1737
Bst2UI CCWGG 2 cut(s) 195, 1769
Bst4CI ACNGT 5 cut(s) 439, 916, 1209, 1429, 1614
Bst6I CTCTTC 3 cut(s) 1245, 1254, 1530
BstACI GRCGYC 1 cut(s) 1737
BstAPI GCANNNNNTGC 2 cut(s) 875, 1794
BstC8I GCNNGC 5 cut(s) 355, 517, 621, 932, 1747
BstDEI CTNAG 8 cut(s) 35, 346, 743, 842, 1151, 1349, 1704, 1859
BstDSI CCRYGG 2 cut(s) 212, 1142
BstF5I GGATG 4 cut(s) 383, 1250, 1276, 1498
BstFNI CGCG 6 cut(s) 604, 654, 666, 759, 1144, 1935
BstHHI GCGC 1 cut(s) 1868
BstMAI GTCTC 6 cut(s) 755, 1196, 1211, 1284, 1620, 1707
BstMCI CGRYCG 1 cut(s) 549
BstMWI GCNNNNNNNGC 9 cut(s) 113, 525, 872, 875, 884, 1076, 1794, 1863, 1896
BstNI CCWGG 2 cut(s) 195, 1769
BstNSI RCATGY 3 cut(s) 934, 1849, 1857
BstSCI CCNGG 3 cut(s) 193, 855, 1767
BstSFI CTRYAG 1 cut(s) 972
BstSLI GKGCMC 2 cut(s) 1845, 1853
BstUI CGCG 6 cut(s) 604, 654, 666, 759, 1144, 1935
BstV1I GCAGC 3 cut(s) 862, 878, 1781
BstV2I GAAGAC 1 cut(s) 1575
BstX2I RGATCY 2 cut(s) 26, 1345
BstYI RGATCY 2 cut(s) 26, 1345
Bsu15I ATCGAT 2 cut(s) 295, 1467
BsuI GTATCC 1 cut(s) 1140
BsuRI GGCC 4 cut(s) 5, 116, 762, 1327
BsuTUI ATCGAT 2 cut(s) 295, 1467
BtgI CCRYGG 2 cut(s) 212, 1142
BtsCI GGATG 4 cut(s) 383, 1250, 1276, 1498
BtsIMutI CAGTG 1 cut(s) 955
Cac8I GCNNGC 5 cut(s) 355, 517, 621, 932, 1747
CfoI GCGC 1 cut(s) 1868
Cfr42I CCGCGG 1 cut(s) 1145
ClaI ATCGAT 2 cut(s) 295, 1467
CseI GACGC 2 cut(s) 571, 696
Csp6I GTAC 2 cut(s) 789, 1185
CviAII CATG 6 cut(s) 931, 1294, 1629, 1846, 1854, 1910
CviQI GTAC 2 cut(s) 789, 1185
DdeI CTNAG 8 cut(s) 35, 346, 743, 842, 1151, 1349, 1704, 1859
DraI TTTAAA 1 cut(s) 1783
EaeI YGGCCR 1 cut(s) 114
Eam1104I CTCTTC 3 cut(s) 1245, 1254, 1530
EarI CTCTTC 3 cut(s) 1245, 1254, 1530
EciI GGCGGA 1 cut(s) 321
Ecl136II GAGCTC 1 cut(s) 132
Eco147I AGGCCT 1 cut(s) 1327
Eco24I GRGCYC 1 cut(s) 134
Eco53kI GAGCTC 1 cut(s) 132
Eco57I CTGAAG 2 cut(s) 903, 1040
EcoICRI GAGCTC 1 cut(s) 132
EcoRI GAATTC 1 cut(s) 606
EcoRII CCWGG 2 cut(s) 193, 1767
EcoT38I GRGCYC 1 cut(s) 134
Esp3I CGTCTC 1 cut(s) 1620
FaeI CATG 6 cut(s) 934, 1297, 1632, 1849, 1857, 1913
FalI AAGNNNNNCTT 2 cut(s) 607, 639
FaqI GGGAC 2 cut(s) 469, 1468
FatI CATG 6 cut(s) 930, 1293, 1628, 1845, 1853, 1909
FauI CCCGC 2 cut(s) 1159, 1883
FbaI TGATCA 1 cut(s) 430
Fnu4HI GCNGC 6 cut(s) 740, 760, 867, 876, 879, 1795
FokI GGATG 4 cut(s) 370, 1257, 1283, 1485
FriOI GRGCYC 1 cut(s) 134
Fsp4HI GCNGC 6 cut(s) 740, 760, 867, 876, 879, 1795
FspI TGCGCA 1 cut(s) 1867
GlaI GCGC 1 cut(s) 1867
GluI GCNGC 6 cut(s) 740, 760, 867, 876, 879, 1795
GsuI CTGGAG 2 cut(s) 587, 710
HaeIII GGCC 4 cut(s) 5, 116, 762, 1327
HapII CCGG 8 cut(s) 113, 203, 484, 856, 888, 1502, 1510, 1619
HgaI GACGC 2 cut(s) 571, 696
HhaI GCGC 1 cut(s) 1868
Hin1I GRCGYC 1 cut(s) 1737
Hin1II CATG 6 cut(s) 934, 1297, 1632, 1849, 1857, 1913
Hin6I GCGC 1 cut(s) 1866
HinP1I GCGC 1 cut(s) 1866
HincII GTYRAC 1 cut(s) 905
HindII GTYRAC 1 cut(s) 905
HindIII AAGCTT 1 cut(s) 621
HpaII CCGG 8 cut(s) 113, 203, 484, 856, 888, 1502, 1510, 1619
HphI GGTGA 4 cut(s) 653, 1111, 1499, 1757
Hpy166II GTNNAC 4 cut(s) 905, 1311, 1765, 1851
Hpy8I GTNNAC 4 cut(s) 905, 1311, 1765, 1851
Hpy99I CGWCG 4 cut(s) 128, 395, 565, 1946
HpyAV CCTTC 5 cut(s) 609, 892, 978, 1064, 1760
HpyCH4III ACNGT 5 cut(s) 439, 916, 1209, 1429, 1614
HpyCH4IV ACGT 5 cut(s) 658, 715, 1727, 1737, 1926
HpyCH4V TGCA 7 cut(s) 271, 533, 643, 934, 1407, 1610, 1851
HpyF10VI GCNNNNNNNGC 9 cut(s) 113, 525, 872, 875, 884, 1076, 1794, 1863, 1896
HpyF3I CTNAG 8 cut(s) 35, 346, 743, 842, 1151, 1349, 1704, 1859
HpySE526I ACGT 5 cut(s) 658, 715, 1727, 1737, 1926
Hsp92I GRCGYC 1 cut(s) 1737
Hsp92II CATG 6 cut(s) 934, 1297, 1632, 1849, 1857, 1913
HspAI GCGC 1 cut(s) 1866
Kpn2I TCCGGA 1 cut(s) 483
KpnI GGTACC 1 cut(s) 792
Ksp22I TGATCA 1 cut(s) 430
KspI CCGCGG 1 cut(s) 1145
LguI GCTCTTC 1 cut(s) 1245
LmnI GCTCC 3 cut(s) 112, 254, 385
Lsp1109I GCAGC 3 cut(s) 862, 878, 1781
LweI GCATC 2 cut(s) 652, 1853
MaeII ACGT 5 cut(s) 658, 715, 1727, 1737, 1926
MaeIII GTNAC 8 cut(s) 9, 494, 589, 659, 1049, 1126, 1651, 1802
MbiI CCGCTC 1 cut(s) 979
MflI RGATCY 2 cut(s) 26, 1345
MhlI GDGCHC 3 cut(s) 134, 1845, 1853
MluCI AATT 4 cut(s) 463, 606, 668, 831
MlyI GAGTC 4 cut(s) 433, 451, 757, 1709
MmeI TCCRAC 5 cut(s) 147, 264, 324, 841, 1714
MroI TCCGGA 1 cut(s) 483
MroXI GAANNNNTTC 3 cut(s) 678, 812, 1429
MseI TTAA 3 cut(s) 552, 983, 1782
MspA1I CMGCKG 3 cut(s) 881, 1060, 1144
MspI CCGG 8 cut(s) 113, 203, 484, 856, 888, 1502, 1510, 1619
MspR9I CCNGG 3 cut(s) 195, 857, 1769
MvaI CCWGG 2 cut(s) 195, 1769
MvnI CGCG 6 cut(s) 604, 654, 666, 759, 1144, 1935
MwoI GCNNNNNNNGC 9 cut(s) 113, 525, 872, 875, 884, 1076, 1794, 1863, 1896
NciI CCSGG 1 cut(s) 857
NheI GCTAGC 1 cut(s) 1745
NlaIII CATG 6 cut(s) 934, 1297, 1632, 1849, 1857, 1913
NlaIV GGNNCC 1 cut(s) 790
NmeAIII GCCGAG 1 cut(s) 293
NmuCI GTSAC 1 cut(s) 659
NsbI TGCGCA 1 cut(s) 1867
NspI RCATGY 3 cut(s) 934, 1849, 1857
PaeI GCATGC 1 cut(s) 934
PceI AGGCCT 1 cut(s) 1327
PciI ACATGT 1 cut(s) 1845
PciSI GCTCTTC 1 cut(s) 1245
PcsI WCGNNNNNNNCGW 1 cut(s) 1932
PdmI GAANNNNTTC 3 cut(s) 678, 812, 1429
PflFI GACNNNGTC 1 cut(s) 1718
PfoI TCCNGGA 2 cut(s) 193, 855
PkrI GCNGC 6 cut(s) 741, 761, 868, 877, 880, 1796
Ple19I CGATCG 1 cut(s) 549
PleI GAGTC 4 cut(s) 432, 451, 756, 1709
PpsI GAGTC 4 cut(s) 432, 451, 756, 1709
PscI ACATGT 1 cut(s) 1845
Psp124BI GAGCTC 1 cut(s) 134
Psp6I CCWGG 2 cut(s) 193, 1767
PspGI CCWGG 2 cut(s) 193, 1767
PspN4I GGNNCC 1 cut(s) 790
PsrI GAACNNNNNNTAC 2 cut(s) 1131, 1163
PsuI RGATCY 2 cut(s) 26, 1345
PsyI GACNNNGTC 1 cut(s) 1718
PvuI CGATCG 1 cut(s) 549
PvuII CAGCTG 1 cut(s) 1060
RsaI GTAC 2 cut(s) 790, 1186
RsaNI GTAC 2 cut(s) 789, 1185
SacI GAGCTC 1 cut(s) 134
SacII CCGCGG 1 cut(s) 1145
SapI GCTCTTC 1 cut(s) 1245
SaqAI TTAA 3 cut(s) 552, 983, 1782
SatI GCNGC 6 cut(s) 740, 760, 867, 876, 879, 1795
SchI GAGTC 4 cut(s) 433, 451, 757, 1709
ScrFI CCNGG 3 cut(s) 195, 857, 1769
SduI GDGCHC 3 cut(s) 134, 1845, 1853
SfaNI GCATC 2 cut(s) 652, 1853
SfcI CTRYAG 1 cut(s) 972
Sfr303I CCGCGG 1 cut(s) 1145
SgrBI CCGCGG 1 cut(s) 1145
SmlI CTYRAG 6 cut(s) 93, 1134, 1197, 1214, 1415, 1582
SmoI CTYRAG 6 cut(s) 93, 1134, 1197, 1214, 1415, 1582
SpeI ACTAGT 1 cut(s) 1109
SphI GCATGC 1 cut(s) 934
Sse9I AATT 4 cut(s) 463, 606, 668, 831
SseBI AGGCCT 1 cut(s) 1327
SstI GAGCTC 1 cut(s) 134
StuI AGGCCT 1 cut(s) 1327
StyD4I CCNGG 3 cut(s) 193, 855, 1767
TaaI ACNGT 5 cut(s) 439, 916, 1209, 1429, 1614
TaiI ACGT 5 cut(s) 661, 718, 1730, 1740, 1929
TaqI TCGA 6 cut(s) 295, 390, 537, 610, 1467, 1944
TasI AATT 4 cut(s) 463, 606, 668, 831
TauI GCSGC 3 cut(s) 742, 762, 881
Tru1I TTAA 3 cut(s) 552, 983, 1782
Tru9I TTAA 3 cut(s) 552, 983, 1782
TscAI CASTG 1 cut(s) 955
TseFI GTSAC 1 cut(s) 659
TseI GCWGC 3 cut(s) 866, 875, 1794
Tsp45I GTSAC 1 cut(s) 659
TspDTI ATGAA 4 cut(s) 950, 1391, 1581, 1667
TspGWI ACGGA 3 cut(s) 229, 408, 1302
TspRI CASTG 1 cut(s) 955
Tth111I GACNNNGTC 1 cut(s) 1718
VneI GTGCAC 1 cut(s) 1849
XapI RAATTY 1 cut(s) 606
XbaI TCTAGA 1 cut(s) 1921
XceI RCATGY 3 cut(s) 934, 1849, 1857
XmnI GAANNNNTTC 3 cut(s) 678, 812, 1429
ZraI GACGTC 1 cut(s) 1738
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.