Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0015463

Physical Location & Seq

Genomic Coordinates Reverse (-)

27744790 .. 27749248

Gene Structure 4459 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G73805.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1356 bp

ATGGCAGGGAAGAGGTTATTTCAAGATCTTGATTCTGACCAAGAAAATAAGTCCGAGAAACGGATTAAATCTGTACTACCATCCCTTGCCTCGCCAATTTCCAGTGTGTTTGGAGCATTGATCTCAGAAAACACCCTTCGTTCTGTCCTAGAGCCCGTTATTAGAAAAGTTGTAAGACAAGAAGTGGAATATGGAATTAGTAAACGATTTCGATTATCTCGGTCATCGTCTTTCCGTATCGAAGCTCCGGAGGCGACTACTCCGACACTGAAGCTAATTTTCCGTAAGAACTTAATGACACCAATATTTACAGGGAGTAAAATCAGTGACGTGGACAACAATCCACTTGAGATTATCCTTGTTGATGACTCAAACAAGCCGGTGAATCTCAACCGTCCAATCAAACTAGACATCGTTGCTCTTCACGGAGATTTTCCTTCGGGTGATAAATGGACTAGTGATGAGTTTGAGAGTAACATCATCAAAGAAAGAGATGGGAAACGGCCGTTACTTGCCGGAGAAGTAAGTGTGACGGTGAGAAACGGCGTTGCAACAATCGGAGAAATTGTGTTCACAGACAATTCGAGTTGGATTCGTAGCCGTAAGTTTAGAATCGGTGCGAAAGTTGCGAAAGGGAGTAGCGGTCAAGGCGTTGTGGTTTGTGAAGCGATGACTGAAGCGATTGTTGTTAGAGATCATCGTGGAGAATTGTACAAGAAACATCACCCACCAATGTTAGAAGACGAAGTGTGGCGGCTAGAGAAGATAGGCAAAGATGGGGCCTTTCACAAGAAGCTCTCCTCTCGCCACATCAACACTGTCCAAGACTTTTTGAAACTATCCGTCGTTGACGTCGACGAACTCCGTCAGATTCTGGGGCCTGGAATGTCTGATAGAAAGTGGGAAGTAACATTGAAACATGCTAGAGAGTGTATTTTGGGAAATAAGTTATACATTTCTAGAGGACCGAATTTTTTCATGATTTTGAATCCGATATGCGAAGTTATGAAAGCACTTATCGATGGTCATGTTCTCTCTAGTCAAGAATCCCTCAACCAGCCCTACGTTAAGAACTTAGTTCGAGATGCTTACTCAAAGGGGAACTTTTTAGAAGTGGGCGAACGAACAGCGAACGAGGCTGCTCTTTTGACACAAGGTGATGATTTGGACCAACAATATGCTGCGAGCCACTACCAAAACATCGAAATCGATAAATCATATCAACAAAACGGATATGTTCAAGAGAGATCTACAAACAATTTGGAGATAGTAAACGAAGGGTATATAACGACTCCAGCGGAATTCAATATATGTTTCACCGGATCTTCGTCTCAAAATCATATAAACCCTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002237 GO:0002239 GO:0002682 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009889 GO:0009987 GO:0010033 GO:0010112 GO:0010224 GO:0010337 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0032350 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043902 GO:0044424 GO:0044464 GO:0045088 GO:0046885 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071216 GO:0071219 GO:0080090 GO:0080134 GO:0080142 GO:0097159 GO:0098542 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Calmodulin_bind

Protein Analysis

451

Amino Acids

50.7

Weight (kDa)

7.16

Isoelectric Point (pI)

41.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Calmodulin_bind	PF07887	90 - 233	4.2e-55	Calmodulin binding protein-like N-terminal domain
Calmod_bind_M	PF20451	245 - 311	8.7e-33	Calmodulin binding protein central domain
Calmod_bind_C	PF20452	316 - 371	1.2e-15	Calmodulin binding protein C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015463)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73805
fragaria_vesca	FvH4_5g11800
malus_domestica	MD14G1228600.v1.1
prunus_persica	Prupe.5G223600_v2.0.a1
pyrus_communis	pycom06g19470 pycom14g18990
rosa_chinensis	RchiOBHm_Chr7g0185801
rosa_laevigata	RLG00000004882
rosa_multiflora	Rmu_sc0002121.1_g000002
rosa_roxburghii	Rroxscaffold_3G00268620
rosa_rugosa	Rorug06G0471400.1
rosa_samantha	Rh7AG070900 Rh7BG076900 Rh7CG076900 Rh7DG076800
rosa_wichuraiana	Rw7G006410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	855
AccI	GTMKAC	1 cut(s)	855
AccIII	TCCGGA	1 cut(s)	247
AciI	CCGC	3 cut(s)	642, 754, 1298
AclWI	GGATC	1 cut(s)	1330
AcoI	YGGCCR	1 cut(s)	503
AcsI	RAATTY	2 cut(s)	970, 1301
AcuI	CTGAAG	2 cut(s)	290, 696
AcyI	GRCGYC	1 cut(s)	852
AdeI	CACNNNGTG	1 cut(s)	1157
AfaI	GTAC	2 cut(s)	75, 713
AfiI	CCNNNNNNNGG	1 cut(s)	60
AgsI	TTSAA	6 cut(s)	23, 835, 916, 988, 1241, 1306
AhlI	ACTAGT	1 cut(s)	455
AjiI	CACGTC	1 cut(s)	331
AjnI	CCWGG	1 cut(s)	880
AluBI	AGCT	3 cut(s)	245, 274, 796
AluI	AGCT	3 cut(s)	245, 274, 796
Alw26I	GTCTC	1 cut(s)	1335
AlwI	GGATC	1 cut(s)	1330
AlwNI	CAGNNNCTG	1 cut(s)	874
Aor13HI	TCCGGA	1 cut(s)	247
AoxI	GGCC	3 cut(s)	503, 780, 878
ApeKI	GCWGC	2 cut(s)	1139, 1181
ApoI	RAATTY	2 cut(s)	970, 1301
Asp700I	GAANNNNTTC	1 cut(s)	974
AspS9I	GGNCC	4 cut(s)	780, 878, 965, 1168
AsuHPI	GGTGA	6 cut(s)	394, 455, 547, 716, 1169, 1309
AvaII	GGWCC	2 cut(s)	965, 1168
BanII	GRGCYC	1 cut(s)	156
BbsI	GAAGAC	1 cut(s)	747
BbvI	GCAGC	2 cut(s)	1126, 1168
BccI	CCATC	4 cut(s)	88, 488, 770, 1016
BceAI	ACGGC	4 cut(s)	490, 518, 559, 585
BciT130I	CCWGG	1 cut(s)	882
BcoDI	GTCTC	1 cut(s)	1335
BcuI	ACTAGT	1 cut(s)	455
BfaI	CTAG	7 cut(s)	149, 407, 456, 758, 924, 960, 1038
BglII	AGATCT	2 cut(s)	25, 1247
BisI	GCNGC	3 cut(s)	755, 1140, 1182
BlsI	GCNGC	3 cut(s)	756, 1141, 1183
Bme1390I	CCNGG	1 cut(s)	882
Bme18I	GGWCC	2 cut(s)	965, 1168
BmgBI	CACGTC	1 cut(s)	331
BmgT120I	GGNCC	4 cut(s)	780, 878, 965, 1168
BmiI	GGNNCC	2 cut(s)	781, 879
BmrFI	CCNGG	1 cut(s)	882
BmsI	GCATC	1 cut(s)	1075
BpiI	GAAGAC	1 cut(s)	747
BpmI	CTGGAG	1 cut(s)	1278
BpuEI	CTTGAG	1 cut(s)	368
Bsa29I	ATCGAT	2 cut(s)	1020, 1209
BsaHI	GRCGYC	1 cut(s)	852
BsaWI	WCCGGW	2 cut(s)	247, 1319
BsaXI	ACNNNNNCTCC	4 cut(s)	552, 582, 628, 658
Bsc4I	CCNNNNNNNGG	1 cut(s)	60
Bse118I	RCCGGY	1 cut(s)	379
Bse1I	ACTGG	1 cut(s)	102
BseAI	TCCGGA	1 cut(s)	247
BseBI	CCWGG	1 cut(s)	882
BseCI	ATCGAT	2 cut(s)	1020, 1209
BseGI	GGATG	1 cut(s)	80
BseLI	CCNNNNNNNGG	1 cut(s)	60
BseMII	CTCAG	1 cut(s)	138
BseNI	ACTGG	1 cut(s)	102
BseRI	GAGGAG	1 cut(s)	790
BseX3I	CGGCCG	1 cut(s)	503
BseXI	GCAGC	2 cut(s)	1126, 1168
Bsh1285I	CGRYCG	1 cut(s)	506
BshFI	GGCC	3 cut(s)	505, 782, 880
BshVI	ATCGAT	2 cut(s)	1020, 1209
BsiEI	CGRYCG	1 cut(s)	506
BsiSI	CCGG	4 cut(s)	248, 380, 516, 1320
BslI	CCNNNNNNNGG	1 cut(s)	60
BsmAI	GTCTC	1 cut(s)	1335
BsmBI	CGTCTC	1 cut(s)	1335
BsnI	GGCC	3 cut(s)	505, 782, 880
Bsp1286I	GDGCHC	1 cut(s)	156
Bsp13I	TCCGGA	1 cut(s)	247
Bsp1407I	TGTACA	1 cut(s)	711
Bsp143I	GATC	5 cut(s)	25, 120, 694, 1247, 1322
BspACI	CCGC	3 cut(s)	642, 754, 1298
BspANI	GGCC	3 cut(s)	505, 782, 880
BspCNI	CTCAG	1 cut(s)	137
BspDI	ATCGAT	2 cut(s)	1020, 1209
BspEI	TCCGGA	1 cut(s)	247
BspHI	TCATGA	1 cut(s)	978
BspLI	GGNNCC	2 cut(s)	781, 879
BspPI	GGATC	1 cut(s)	1330
BspQI	GCTCTTC	1 cut(s)	426
BsrFI	RCCGGY	1 cut(s)	379
BsrGI	TGTACA	1 cut(s)	711
BsrI	ACTGG	1 cut(s)	102
BssAI	RCCGGY	1 cut(s)	379
BssMI	GATC	5 cut(s)	25, 120, 694, 1247, 1322
BssNI	GRCGYC	1 cut(s)	852
Bst2UI	CCWGG	1 cut(s)	882
Bst4CI	ACNGT	3 cut(s)	395, 535, 820
Bst6I	CTCTTC	2 cut(s)	5, 426
BstACI	GRCGYC	1 cut(s)	852
BstAUI	TGTACA	1 cut(s)	711
BstC8I	GCNNGC	1 cut(s)	1186
BstDEI	CTNAG	2 cut(s)	124, 1075
BstF5I	GGATG	1 cut(s)	80
BstKTI	GATC	5 cut(s)	28, 123, 697, 1250, 1325
BstMAI	GTCTC	1 cut(s)	1335
BstMBI	GATC	5 cut(s)	25, 120, 694, 1247, 1322
BstMCI	CGRYCG	1 cut(s)	506
BstMWI	GCNNNNNNNGC	4 cut(s)	251, 626, 648, 1136
BstNI	CCWGG	1 cut(s)	882
BstNSI	RCATGY	1 cut(s)	923
BstSCI	CCNGG	1 cut(s)	880
BstV1I	GCAGC	2 cut(s)	1126, 1168
BstV2I	GAAGAC	1 cut(s)	747
BstX2I	RGATCY	3 cut(s)	25, 1247, 1322
BstYI	RGATCY	3 cut(s)	25, 1247, 1322
BstZI	CGGCCG	1 cut(s)	503
Bsu15I	ATCGAT	2 cut(s)	1020, 1209
BsuRI	GGCC	3 cut(s)	505, 782, 880
BsuTUI	ATCGAT	2 cut(s)	1020, 1209
BtgZI	GCGATG	1 cut(s)	683
BtrI	CACGTC	1 cut(s)	331
BtsCI	GGATG	1 cut(s)	80
BtsIMutI	CAGTG	4 cut(s)	109, 266, 331, 816
Cac8I	GCNNGC	1 cut(s)	1186
CaiI	CAGNNNCTG	1 cut(s)	874
CciI	TCATGA	1 cut(s)	978
Cfr10I	RCCGGY	1 cut(s)	379
Cfr13I	GGNCC	4 cut(s)	780, 878, 965, 1168
ClaI	ATCGAT	2 cut(s)	1020, 1209
Csp6I	GTAC	2 cut(s)	74, 712
CviAII	CATG	3 cut(s)	920, 979, 1028
CviQI	GTAC	2 cut(s)	74, 712
DdeI	CTNAG	2 cut(s)	124, 1075
DpnI	GATC	5 cut(s)	27, 122, 696, 1249, 1324
DpnII	GATC	5 cut(s)	25, 120, 694, 1247, 1322
DraIII	CACNNNGTG	1 cut(s)	1157
EaeI	YGGCCR	1 cut(s)	503
EagI	CGGCCG	1 cut(s)	503
Eam1104I	CTCTTC	2 cut(s)	5, 426
EarI	CTCTTC	2 cut(s)	5, 426
EclXI	CGGCCG	1 cut(s)	503
Eco24I	GRGCYC	1 cut(s)	156
Eco47I	GGWCC	2 cut(s)	965, 1168
Eco52I	CGGCCG	1 cut(s)	503
Eco57I	CTGAAG	2 cut(s)	290, 696
EcoO109I	RGGNCCY	2 cut(s)	780, 878
EcoRI	GAATTC	1 cut(s)	1301
EcoRII	CCWGG	1 cut(s)	880
EcoT38I	GRGCYC	1 cut(s)	156
Esp3I	CGTCTC	1 cut(s)	1335
FaeI	CATG	3 cut(s)	923, 982, 1031
FalI	AAGNNNNNCTT	2 cut(s)	1088, 1120
FatI	CATG	3 cut(s)	919, 978, 1027
FblI	GTMKAC	1 cut(s)	855
Fnu4HI	GCNGC	3 cut(s)	755, 1140, 1182
FokI	GGATG	1 cut(s)	67
FriOI	GRGCYC	1 cut(s)	156
Fsp4HI	GCNGC	3 cut(s)	755, 1140, 1182
FspBI	CTAG	7 cut(s)	149, 407, 456, 758, 924, 960, 1038
GluI	GCNGC	3 cut(s)	755, 1140, 1182
GsuI	CTGGAG	1 cut(s)	1278
HaeIII	GGCC	3 cut(s)	505, 782, 880
HapII	CCGG	4 cut(s)	248, 380, 516, 1320
Hin1I	GRCGYC	1 cut(s)	852
Hin1II	CATG	3 cut(s)	923, 982, 1031
HincII	GTYRAC	2 cut(s)	850, 856
HindII	GTYRAC	2 cut(s)	850, 856
HinfI	GANTC	9 cut(s)	32, 368, 385, 592, 612, 871, 988, 1046, 1291
HpaII	CCGG	4 cut(s)	248, 380, 516, 1320
HphI	GGTGA	6 cut(s)	394, 455, 547, 716, 1169, 1309
Hpy166II	GTNNAC	6 cut(s)	203, 334, 573, 850, 856, 1273
Hpy188I	TCNGA	8 cut(s)	37, 55, 127, 264, 560, 870, 892, 993
Hpy188III	TCNNGA	8 cut(s)	23, 29, 248, 960, 979, 1043, 1082, 1241
Hpy8I	GTNNAC	6 cut(s)	203, 334, 573, 850, 856, 1273
Hpy99I	CGWCG	3 cut(s)	848, 857, 860
HpyAV	CCTTC	3 cut(s)	146, 447, 1271
HpyCH4III	ACNGT	3 cut(s)	395, 535, 820
HpyCH4IV	ACGT	3 cut(s)	330, 852, 1065
HpyCH4V	TGCA	1 cut(s)	551
HpyF10VI	GCNNNNNNNGC	4 cut(s)	251, 626, 648, 1136
HpyF3I	CTNAG	2 cut(s)	124, 1075
HpySE526I	ACGT	3 cut(s)	330, 852, 1065
Hsp92I	GRCGYC	1 cut(s)	852
Hsp92II	CATG	3 cut(s)	923, 982, 1031
Kpn2I	TCCGGA	1 cut(s)	247
Kzo9I	GATC	5 cut(s)	25, 120, 694, 1247, 1322
LguI	GCTCTTC	1 cut(s)	426
LmnI	GCTCC	2 cut(s)	113, 250
Lsp1109I	GCAGC	2 cut(s)	1126, 1168
LweI	GCATC	1 cut(s)	1075
MaeI	CTAG	7 cut(s)	149, 407, 456, 758, 924, 960, 1038
MaeII	ACGT	3 cut(s)	330, 852, 1065
MaeIII	GTNAC	5 cut(s)	326, 473, 507, 529, 907
MalI	GATC	5 cut(s)	27, 122, 696, 1249, 1324
MboI	GATC	5 cut(s)	25, 120, 694, 1247, 1322
MboII	GAAGA	5 cut(s)	22, 413, 752, 775, 1317
MflI	RGATCY	3 cut(s)	25, 1247, 1322
MhlI	GDGCHC	1 cut(s)	156
MluCI	AATT	9 cut(s)	96, 195, 276, 564, 580, 707, 970, 1258, 1301
MlyI	GAGTC	2 cut(s)	362, 1285
MmeI	TCCRAC	2 cut(s)	287, 569
MnlI	CCTC	7 cut(s)	6, 100, 244, 811, 956, 1061, 1129
MroI	TCCGGA	1 cut(s)	247
MroXI	GAANNNNTTC	1 cut(s)	974
MseI	TTAA	3 cut(s)	66, 293, 1068
MspA1I	CMGCKG	1 cut(s)	1298
MspI	CCGG	4 cut(s)	248, 380, 516, 1320
MspR9I	CCNGG	1 cut(s)	882
MvaI	CCWGG	1 cut(s)	882
MwoI	GCNNNNNNNGC	4 cut(s)	251, 626, 648, 1136
NdeII	GATC	5 cut(s)	25, 120, 694, 1247, 1322
NlaIII	CATG	3 cut(s)	923, 982, 1031
NlaIV	GGNNCC	2 cut(s)	781, 879
NmuCI	GTSAC	2 cut(s)	326, 529
NspI	RCATGY	1 cut(s)	923
PagI	TCATGA	1 cut(s)	978
PciSI	GCTCTTC	1 cut(s)	426
PcsI	WCGNNNNNNNCGW	1 cut(s)	852
PdmI	GAANNNNTTC	1 cut(s)	974
PfeI	GAWTC	7 cut(s)	32, 385, 592, 612, 871, 988, 1046
PkrI	GCNGC	3 cut(s)	756, 1141, 1183
PleI	GAGTC	2 cut(s)	362, 1285
PpsI	GAGTC	2 cut(s)	362, 1285
Psp6I	CCWGG	1 cut(s)	880
PspGI	CCWGG	1 cut(s)	880
PspN4I	GGNNCC	2 cut(s)	781, 879
PspPI	GGNCC	4 cut(s)	780, 878, 965, 1168
PstNI	CAGNNNCTG	1 cut(s)	874
PsuI	RGATCY	3 cut(s)	25, 1247, 1322
RsaI	GTAC	2 cut(s)	75, 713
RsaNI	GTAC	2 cut(s)	74, 712
SalI	GTCGAC	1 cut(s)	854
SapI	GCTCTTC	1 cut(s)	426
SaqAI	TTAA	3 cut(s)	66, 293, 1068
SatI	GCNGC	3 cut(s)	755, 1140, 1182
Sau3AI	GATC	5 cut(s)	25, 120, 694, 1247, 1322
Sau96I	GGNCC	4 cut(s)	780, 878, 965, 1168
SchI	GAGTC	2 cut(s)	362, 1285
ScrFI	CCNGG	1 cut(s)	882
SduI	GDGCHC	1 cut(s)	156
SetI	ASST	8 cut(s)	17, 247, 276, 333, 798, 855, 1068, 1159
SfaNI	GCATC	1 cut(s)	1075
SgrDI	CGTCGACG	1 cut(s)	854
SinI	GGWCC	2 cut(s)	965, 1168
SmlI	CTYRAG	1 cut(s)	347
SmoI	CTYRAG	1 cut(s)	347
SpeI	ACTAGT	1 cut(s)	455
Sse9I	AATT	9 cut(s)	96, 195, 276, 564, 580, 707, 970, 1258, 1301
SsiI	CCGC	3 cut(s)	642, 754, 1298
SspI	AATATT	1 cut(s)	306
SspMI	CTAG	7 cut(s)	149, 407, 456, 758, 924, 960, 1038
StyD4I	CCNGG	1 cut(s)	880
TaaI	ACNGT	3 cut(s)	395, 535, 820
TaiI	ACGT	3 cut(s)	333, 855, 1068
TaqI	TCGA	8 cut(s)	211, 240, 584, 855, 1020, 1081, 1203, 1209
TaqII	GACCGA	2 cut(s)	210, 982
TasI	AATT	9 cut(s)	96, 195, 276, 564, 580, 707, 970, 1258, 1301
TatI	WGTACW	2 cut(s)	73, 711
TauI	GCSGC	1 cut(s)	757
TfiI	GAWTC	7 cut(s)	32, 385, 592, 612, 871, 988, 1046
Tru1I	TTAA	3 cut(s)	66, 293, 1068
Tru9I	TTAA	3 cut(s)	66, 293, 1068
TscAI	CASTG	4 cut(s)	109, 273, 331, 823
TseFI	GTSAC	2 cut(s)	326, 529
TseI	GCWGC	2 cut(s)	1139, 1181
Tsp45I	GTSAC	2 cut(s)	326, 529
TspDTI	ATGAA	2 cut(s)	967, 1022
TspGWI	ACGGA	7 cut(s)	76, 224, 272, 441, 832, 854, 1245
TspRI	CASTG	4 cut(s)	109, 273, 331, 823
VpaK11BI	GGWCC	2 cut(s)	965, 1168
XapI	RAATTY	2 cut(s)	970, 1301
XbaI	TCTAGA	1 cut(s)	959
XceI	RCATGY	1 cut(s)	923
XmiI	GTMKAC	1 cut(s)	855
XmnI	GAANNNNTTC	1 cut(s)	974
XspI	CTAG	7 cut(s)	149, 407, 456, 758, 924, 960, 1038
ZraI	GACGTC	1 cut(s)	853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.