Helix-loop-helix DNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G74500 |
| malus_domestica | MD14G1197100.v1.1 |
| prunus_persica | Prupe.5G189300_v2.0.a1 |
| pyrus_communis | pycom14g16380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 56 |
| AgsI | TTSAA | 1 cut(s) | 45 |
| AluBI | AGCT | 4 cut(s) | 94, 106, 251, 267 |
| AluI | AGCT | 4 cut(s) | 94, 106, 251, 267 |
| Alw21I | GWGCWC | 1 cut(s) | 108 |
| AlwI | GGATC | 1 cut(s) | 56 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 242 |
| ApeKI | GCWGC | 2 cut(s) | 140, 251 |
| BanII | GRGCYC | 1 cut(s) | 108 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 256 |
| Bbv12I | GWGCWC | 1 cut(s) | 108 |
| BbvI | GCAGC | 2 cut(s) | 152, 238 |
| BfaI | CTAG | 1 cut(s) | 227 |
| BisI | GCNGC | 2 cut(s) | 141, 252 |
| BlsI | GCNGC | 2 cut(s) | 142, 253 |
| BoxI | GACNNNNGTC | 1 cut(s) | 117 |
| Bpu10I | CCTNAGC | 2 cut(s) | 102, 107 |
| BsaAI | YACGTR | 1 cut(s) | 162 |
| BseMII | CTCAG | 5 cut(s) | 66, 93, 121, 210, 249 |
| BseXI | GCAGC | 2 cut(s) | 152, 238 |
| BsgI | GTGCAG | 1 cut(s) | 228 |
| BsiHKAI | GWGCWC | 1 cut(s) | 108 |
| BslFI | GGGAC | 1 cut(s) | 125 |
| BsmFI | GGGAC | 1 cut(s) | 125 |
| Bsp1286I | GDGCHC | 1 cut(s) | 108 |
| Bsp143I | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| BspCNI | CTCAG | 5 cut(s) | 65, 94, 120, 211, 248 |
| BspPI | GGATC | 1 cut(s) | 56 |
| BssMI | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| Bst4CI | ACNGT | 1 cut(s) | 116 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 251 |
| BstBAI | YACGTR | 1 cut(s) | 162 |
| BstDEI | CTNAG | 6 cut(s) | 52, 102, 107, 203, 219, 235 |
| BstKTI | GATC | 5 cut(s) | 17, 51, 61, 73, 202 |
| BstMBI | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 251 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 117 |
| BstV1I | GCAGC | 2 cut(s) | 152, 238 |
| BstX2I | RGATCY | 1 cut(s) | 48 |
| BstYI | RGATCY | 1 cut(s) | 48 |
| BtsI | GCAGTG | 1 cut(s) | 240 |
| BtsIMutI | CAGTG | 1 cut(s) | 240 |
| CaiI | CAGNNNCTG | 1 cut(s) | 242 |
| CviJI | RGCY | 5 cut(s) | 94, 106, 214, 251, 267 |
| CviKI_1 | RGCY | 5 cut(s) | 94, 106, 214, 251, 267 |
| DdeI | CTNAG | 6 cut(s) | 52, 102, 107, 203, 219, 235 |
| DpnI | GATC | 5 cut(s) | 16, 50, 60, 72, 201 |
| DpnII | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| Ecl136II | GAGCTC | 1 cut(s) | 106 |
| Eco24I | GRGCYC | 1 cut(s) | 108 |
| Eco53kI | GAGCTC | 1 cut(s) | 106 |
| EcoICRI | GAGCTC | 1 cut(s) | 106 |
| EcoT38I | GRGCYC | 1 cut(s) | 108 |
| FaiI | YATR | 2 cut(s) | 173, 186 |
| FaqI | GGGAC | 1 cut(s) | 125 |
| Fnu4HI | GCNGC | 2 cut(s) | 141, 252 |
| FriOI | GRGCYC | 1 cut(s) | 108 |
| Fsp4HI | GCNGC | 2 cut(s) | 141, 252 |
| FspBI | CTAG | 1 cut(s) | 227 |
| GluI | GCNGC | 2 cut(s) | 141, 252 |
| HindIII | AAGCTT | 1 cut(s) | 265 |
| HinfI | GANTC | 1 cut(s) | 178 |
| Hpy188I | TCNGA | 6 cut(s) | 55, 75, 127, 220, 238, 263 |
| Hpy188III | TCNNGA | 3 cut(s) | 6, 36, 101 |
| Hpy99I | CGWCG | 1 cut(s) | 123 |
| HpyCH4III | ACNGT | 1 cut(s) | 116 |
| HpyCH4IV | ACGT | 2 cut(s) | 19, 161 |
| HpyCH4V | TGCA | 4 cut(s) | 88, 165, 184, 245 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 251 |
| HpyF3I | CTNAG | 6 cut(s) | 52, 102, 107, 203, 219, 235 |
| HpySE526I | ACGT | 2 cut(s) | 19, 161 |
| Kzo9I | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| LpnPI | CCDG | 3 cut(s) | 21, 94, 114 |
| Lsp1109I | GCAGC | 2 cut(s) | 152, 238 |
| MaeI | CTAG | 1 cut(s) | 227 |
| MaeII | ACGT | 2 cut(s) | 19, 161 |
| MaeIII | GTNAC | 2 cut(s) | 150, 222 |
| MalI | GATC | 5 cut(s) | 16, 50, 60, 72, 201 |
| MboI | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| MboII | GAAGA | 4 cut(s) | 21, 24, 68, 89 |
| MflI | RGATCY | 1 cut(s) | 48 |
| MhlI | GDGCHC | 1 cut(s) | 108 |
| MmeI | TCCRAC | 1 cut(s) | 150 |
| MnlI | CCTC | 4 cut(s) | 18, 138, 184, 204 |
| MseI | TTAA | 1 cut(s) | 257 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 251 |
| NdeII | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| PfeI | GAWTC | 1 cut(s) | 178 |
| PkrI | GCNGC | 2 cut(s) | 142, 253 |
| Ppu21I | YACGTR | 1 cut(s) | 162 |
| PshAI | GACNNNNGTC | 1 cut(s) | 117 |
| Psp124BI | GAGCTC | 1 cut(s) | 108 |
| PstNI | CAGNNNCTG | 1 cut(s) | 242 |
| PsuI | RGATCY | 1 cut(s) | 48 |
| SacI | GAGCTC | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 257 |
| SatI | GCNGC | 2 cut(s) | 141, 252 |
| Sau3AI | GATC | 5 cut(s) | 14, 48, 58, 70, 199 |
| SduI | GDGCHC | 1 cut(s) | 108 |
| SetI | ASST | 8 cut(s) | 22, 96, 108, 135, 164, 195, 253, 269 |
| SspMI | CTAG | 1 cut(s) | 227 |
| SstI | GAGCTC | 1 cut(s) | 108 |
| TaaI | ACNGT | 1 cut(s) | 116 |
| TaiI | ACGT | 2 cut(s) | 22, 164 |
| TaqI | TCGA | 1 cut(s) | 23 |
| TfiI | GAWTC | 1 cut(s) | 178 |
| Tru1I | TTAA | 1 cut(s) | 257 |
| Tru9I | TTAA | 1 cut(s) | 257 |
| TscAI | CASTG | 1 cut(s) | 247 |
| TseI | GCWGC | 2 cut(s) | 140, 251 |
| TspGWI | ACGGA | 1 cut(s) | 190 |
| TspRI | CASTG | 1 cut(s) | 247 |
| XspI | CTAG | 1 cut(s) | 227 |