AT2G16620
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
7205391 .. 7205918
528 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G16620.1

Sequence Viewer

Length: 402 bp
ATGAAGCTCGTACTCGAGGGAGTAGACTCATTTGAGACATTAAGAGTGGTGGGAACCTTCAACTGTATTGATCCAGATTATGTTGGTTCTAAGAGGGTCACAAAAAAAGCGGATGTATATGCATTCGAGGTGATTCTAATGGAGTTGATCACAGGAAGAAAAGCGAATTATGAGACTTTGAGTGTTGATGAACAAAATCTGGTCATGTGGTTACGTCCGAAGATTAAAATTTCAACATTCTTGAACTTGGTTGATGGCACCATAGCAACGGACAAAGAAACCATTAAGAGAATCAAGAAGATTGCAAAATTGGCTGAATATTGCACTTCTCAAGAAGTTGAAAGTAGACCATTAAGAGCATCAAGAACAAAATCTGGTAATGAAGTTACGTCCGAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

133

Amino Acids

15.05

Weight (kDa)

7.69

Isoelectric Point (pI)

26.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0027000)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G16620 AT3G23650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 257
AccI GTMKAC 2 cut(s) 24, 346
AciI CCGC 1 cut(s) 110
AclWI GGATC 1 cut(s) 65
AcsI RAATTY 1 cut(s) 228
AfaI GTAC 1 cut(s) 12
AgsI TTSAA 4 cut(s) 61, 234, 244, 341
AluBI AGCT 1 cut(s) 7
AluI AGCT 1 cut(s) 7
Alw26I GTCTC 2 cut(s) 29, 167
AlwI GGATC 1 cut(s) 65
Ama87I CYCGRG 1 cut(s) 14
ApoI RAATTY 1 cut(s) 228
AsuHPI GGTGA 1 cut(s) 142
AvaI CYCGRG 1 cut(s) 14
BanI GGYRCC 1 cut(s) 257
BccI CCATC 1 cut(s) 248
BclI TGATCA 1 cut(s) 147
BcoDI GTCTC 2 cut(s) 29, 167
BmeT110I CYCGRG 1 cut(s) 14
BmiI GGNNCC 2 cut(s) 55, 259
BmsI GCATC 1 cut(s) 368
BpuEI CTTGAG 1 cut(s) 315
BseGI GGATG 1 cut(s) 118
BshNI GGYRCC 1 cut(s) 257
BsiHKCI CYCGRG 1 cut(s) 14
BsmAI GTCTC 2 cut(s) 29, 167
BsmI GAATGC 1 cut(s) 122
BsoBI CYCGRG 1 cut(s) 14
Bsp143I GATC 2 cut(s) 70, 147
BspACI CCGC 1 cut(s) 110
BspLI GGNNCC 2 cut(s) 55, 259
BspPI GGATC 1 cut(s) 65
BspT107I GGYRCC 1 cut(s) 257
BssMI GATC 2 cut(s) 70, 147
Bst4CI ACNGT 1 cut(s) 65
BstDEI CTNAG 1 cut(s) 90
BstF5I GGATG 1 cut(s) 118
BstKTI GATC 2 cut(s) 73, 150
BstMAI GTCTC 2 cut(s) 29, 167
BstMBI GATC 2 cut(s) 70, 147
BstMWI GCNNNNNNNGC 1 cut(s) 311
BtsCI GGATG 1 cut(s) 118
Csp6I GTAC 1 cut(s) 11
CviAII CATG 1 cut(s) 205
CviJI RGCY 2 cut(s) 7, 314
CviKI_1 RGCY 2 cut(s) 7, 314
CviQI GTAC 1 cut(s) 11
DdeI CTNAG 1 cut(s) 90
DpnI GATC 2 cut(s) 72, 149
DpnII GATC 2 cut(s) 70, 147
Eco88I CYCGRG 1 cut(s) 14
EcoT22I ATGCAT 1 cut(s) 124
FaeI CATG 1 cut(s) 208
FaiI YATR 6 cut(s) 81, 118, 120, 171, 206, 263
FatI CATG 1 cut(s) 204
FbaI TGATCA 1 cut(s) 147
FblI GTMKAC 2 cut(s) 24, 346
FokI GGATG 1 cut(s) 125
Hin1II CATG 1 cut(s) 208
HinfI GANTC 3 cut(s) 26, 133, 291
HphI GGTGA 1 cut(s) 142
Hpy166II GTNNAC 2 cut(s) 25, 347
Hpy188I TCNGA 2 cut(s) 219, 394
Hpy188III TCNNGA 5 cut(s) 74, 241, 295, 332, 363
Hpy8I GTNNAC 2 cut(s) 25, 347
HpyAV CCTTC 1 cut(s) 67
HpyCH4III ACNGT 1 cut(s) 65
HpyCH4IV ACGT 2 cut(s) 214, 389
HpyCH4V TGCA 3 cut(s) 122, 305, 324
HpyF10VI GCNNNNNNNGC 1 cut(s) 311
HpyF3I CTNAG 1 cut(s) 90
HpySE526I ACGT 2 cut(s) 214, 389
Hsp92II CATG 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 147
Kzo9I GATC 2 cut(s) 70, 147
LpnPI CCDG 4 cut(s) 87, 138, 185, 360
LweI GCATC 1 cut(s) 368
MaeII ACGT 2 cut(s) 214, 389
MaeIII GTNAC 3 cut(s) 97, 210, 385
MalI GATC 2 cut(s) 72, 149
MboI GATC 2 cut(s) 70, 147
MboII GAAGA 3 cut(s) 168, 232, 310
MluCI AATT 3 cut(s) 166, 228, 308
MlyI GAGTC 1 cut(s) 20
MnlI CCTC 3 cut(s) 10, 87, 121
Mph1103I ATGCAT 1 cut(s) 124
MseI TTAA 5 cut(s) 41, 225, 285, 353, 400
Mva1269I GAATGC 1 cut(s) 122
MwoI GCNNNNNNNGC 1 cut(s) 311
NdeII GATC 2 cut(s) 70, 147
NlaIII CATG 1 cut(s) 208
NlaIV GGNNCC 2 cut(s) 55, 259
NmuCI GTSAC 1 cut(s) 97
NsiI ATGCAT 1 cut(s) 124
PaeR7I CTCGAG 1 cut(s) 14
PctI GAATGC 1 cut(s) 122
PfeI GAWTC 2 cut(s) 133, 291
PleI GAGTC 1 cut(s) 20
PpsI GAGTC 1 cut(s) 20
PspN4I GGNNCC 2 cut(s) 55, 259
PspXI VCTCGAGB 1 cut(s) 14
RsaI GTAC 1 cut(s) 12
RsaNI GTAC 1 cut(s) 11
SaqAI TTAA 5 cut(s) 41, 225, 285, 353, 400
Sau3AI GATC 2 cut(s) 70, 147
SchI GAGTC 1 cut(s) 20
SetI ASST 5 cut(s) 9, 59, 132, 217, 392
SfaNI GCATC 1 cut(s) 368
Sfr274I CTCGAG 1 cut(s) 14
SlaI CTCGAG 1 cut(s) 14
SmlI CTYRAG 2 cut(s) 14, 330
SmoI CTYRAG 2 cut(s) 14, 330
Sse9I AATT 3 cut(s) 166, 228, 308
SsiI CCGC 1 cut(s) 110
SspI AATATT 1 cut(s) 320
TaaI ACNGT 1 cut(s) 65
TaiI ACGT 2 cut(s) 217, 392
TaqI TCGA 2 cut(s) 15, 126
TasI AATT 3 cut(s) 166, 228, 308
TfiI GAWTC 2 cut(s) 133, 291
Tru1I TTAA 5 cut(s) 41, 225, 285, 353, 400
Tru9I TTAA 5 cut(s) 41, 225, 285, 353, 400
TseFI GTSAC 1 cut(s) 97
Tsp45I GTSAC 1 cut(s) 97
TspDTI ATGAA 3 cut(s) 17, 204, 396
TspGWI ACGGA 1 cut(s) 284
XapI RAATTY 1 cut(s) 228
XhoI CTCGAG 1 cut(s) 14
XmiI GTMKAC 2 cut(s) 24, 346
Zsp2I ATGCAT 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.