AT3G23650
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
8510689 .. 8511196
508 bp
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UTR
Exon/CDS
Intron
AT3G23650.1

Sequence Viewer

Length: 405 bp
ATGAGAGCGAAGATTTCTGATTTTGGTTGTATAAAGCTCGTACTCGAGGGAGTCGACTCAGTTGAGACATTAACAATGGTGGGAACCTTCAACTATATATTGATCCATATTATGTTGGTAAGTTTTAAGAGTGTCAAAAAAAGCAGATGTATATGCTTTCGGGGTGATTCTAATGGAGTTGATCACATGAAGAAAGTGAATGATGAGACTTTGAGTGTTGAGGAACAAAATCTGGTCATGTGGTTATGTCCGAAGATTAAAGATTCAACATTCTTGAACTTGGTTGATGGCACCATAGCAACAGACGAAGAAACCATTAAAAGCATTAAGAAGATTGCGAAATTGGCTGAATATTGCACTTCTCAAGAAGTTGAAAGTAGACCATTGAGAGCATCAAGAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

134

Amino Acids

15.09

Weight (kDa)

7.61

Isoelectric Point (pI)

28.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0027000)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G16620 AT3G23650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 290
AccI GTMKAC 2 cut(s) 54, 379
AclWI GGATC 1 cut(s) 97
AfaI GTAC 1 cut(s) 42
AgsI TTSAA 4 cut(s) 91, 267, 277, 374
AluBI AGCT 1 cut(s) 37
AluI AGCT 1 cut(s) 37
Alw26I GTCTC 2 cut(s) 59, 200
AlwI GGATC 1 cut(s) 97
Ama87I CYCGRG 1 cut(s) 44
AsuHPI GGTGA 1 cut(s) 176
AvaI CYCGRG 1 cut(s) 44
BanI GGYRCC 1 cut(s) 290
BccI CCATC 1 cut(s) 281
BclI TGATCA 1 cut(s) 181
BcoDI GTCTC 2 cut(s) 59, 200
BmeT110I CYCGRG 1 cut(s) 44
BmiI GGNNCC 2 cut(s) 85, 292
BmsI GCATC 1 cut(s) 401
BpuEI CTTGAG 1 cut(s) 348
BseMII CTCAG 1 cut(s) 72
BshNI GGYRCC 1 cut(s) 290
BsiHKCI CYCGRG 1 cut(s) 44
BsmAI GTCTC 2 cut(s) 59, 200
BsoBI CYCGRG 1 cut(s) 44
Bsp143I GATC 2 cut(s) 102, 181
BspCNI CTCAG 1 cut(s) 71
BspLI GGNNCC 2 cut(s) 85, 292
BspPI GGATC 1 cut(s) 97
BspT107I GGYRCC 1 cut(s) 290
BssMI GATC 2 cut(s) 102, 181
BstDEI CTNAG 1 cut(s) 58
BstKTI GATC 2 cut(s) 105, 184
BstMAI GTCTC 2 cut(s) 59, 200
BstMBI GATC 2 cut(s) 102, 181
BstMWI GCNNNNNNNGC 1 cut(s) 344
Csp6I GTAC 1 cut(s) 41
CviAII CATG 2 cut(s) 187, 238
CviJI RGCY 2 cut(s) 37, 347
CviKI_1 RGCY 2 cut(s) 37, 347
CviQI GTAC 1 cut(s) 41
DdeI CTNAG 1 cut(s) 58
DpnI GATC 2 cut(s) 104, 183
DpnII GATC 2 cut(s) 102, 181
Eco88I CYCGRG 1 cut(s) 44
FaeI CATG 2 cut(s) 190, 241
FatI CATG 2 cut(s) 186, 237
FbaI TGATCA 1 cut(s) 181
FblI GTMKAC 2 cut(s) 54, 379
Hin1II CATG 2 cut(s) 190, 241
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HinfI GANTC 4 cut(s) 51, 56, 167, 263
HphI GGTGA 1 cut(s) 176
Hpy166II GTNNAC 2 cut(s) 55, 380
Hpy188I TCNGA 2 cut(s) 19, 252
Hpy188III TCNNGA 3 cut(s) 274, 365, 396
Hpy8I GTNNAC 2 cut(s) 55, 380
HpyAV CCTTC 1 cut(s) 97
HpyCH4V TGCA 1 cut(s) 357
HpyF10VI GCNNNNNNNGC 1 cut(s) 344
HpyF3I CTNAG 1 cut(s) 58
Hsp92II CATG 2 cut(s) 190, 241
Ksp22I TGATCA 1 cut(s) 181
Kzo9I GATC 2 cut(s) 102, 181
LpnPI CCDG 1 cut(s) 218
LweI GCATC 1 cut(s) 401
MalI GATC 2 cut(s) 104, 183
MboI GATC 2 cut(s) 102, 181
MboII GAAGA 5 cut(s) 22, 202, 265, 320, 343
MluCI AATT 1 cut(s) 341
MlyI GAGTC 2 cut(s) 50, 60
MnlI CCTC 2 cut(s) 40, 214
MseI TTAA 5 cut(s) 71, 126, 258, 318, 327
MwoI GCNNNNNNNGC 1 cut(s) 344
NdeII GATC 2 cut(s) 102, 181
NlaIII CATG 2 cut(s) 190, 241
NlaIV GGNNCC 2 cut(s) 85, 292
PaeR7I CTCGAG 1 cut(s) 44
PcsI WCGNNNNNNNCGW 1 cut(s) 51
PfeI GAWTC 2 cut(s) 167, 263
PleI GAGTC 2 cut(s) 50, 59
PpsI GAGTC 2 cut(s) 50, 59
PspN4I GGNNCC 2 cut(s) 85, 292
PspXI VCTCGAGB 1 cut(s) 44
RsaI GTAC 1 cut(s) 42
RsaNI GTAC 1 cut(s) 41
SalI GTCGAC 1 cut(s) 53
SaqAI TTAA 5 cut(s) 71, 126, 258, 318, 327
Sau3AI GATC 2 cut(s) 102, 181
SchI GAGTC 2 cut(s) 50, 60
SetI ASST 2 cut(s) 39, 89
SfaNI GCATC 1 cut(s) 401
Sfr274I CTCGAG 1 cut(s) 44
SlaI CTCGAG 1 cut(s) 44
SmlI CTYRAG 2 cut(s) 44, 363
SmoI CTYRAG 2 cut(s) 44, 363
Sse9I AATT 1 cut(s) 341
SspI AATATT 1 cut(s) 353
TaqI TCGA 2 cut(s) 45, 54
TasI AATT 1 cut(s) 341
TfiI GAWTC 2 cut(s) 167, 263
Tru1I TTAA 5 cut(s) 71, 126, 258, 318, 327
Tru9I TTAA 5 cut(s) 71, 126, 258, 318, 327
TspDTI ATGAA 1 cut(s) 203
XhoI CTCGAG 1 cut(s) 44
XmiI GTMKAC 2 cut(s) 54, 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.