regulation of photoperiodism, flowering
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G17770 AT2G17770 AT2G17770 |
| fragaria_vesca | FvH4_3g09450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 212 |
| AgsI | TTSAA | 2 cut(s) | 113, 423 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 12, 44 |
| AluBI | AGCT | 1 cut(s) | 234 |
| AluI | AGCT | 1 cut(s) | 234 |
| Alw26I | GTCTC | 2 cut(s) | 366, 451 |
| AoxI | GGCC | 1 cut(s) | 346 |
| ApeKI | GCWGC | 1 cut(s) | 413 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 279 |
| BbvCI | CCTCAGC | 1 cut(s) | 230 |
| BbvI | GCAGC | 1 cut(s) | 400 |
| BccI | CCATC | 2 cut(s) | 54, 113 |
| BclI | TGATCA | 1 cut(s) | 393 |
| BcoDI | GTCTC | 2 cut(s) | 366, 451 |
| BfaI | CTAG | 2 cut(s) | 366, 429 |
| BisI | GCNGC | 1 cut(s) | 414 |
| BlsI | GCNGC | 1 cut(s) | 415 |
| Bpu10I | CCTNAGC | 1 cut(s) | 230 |
| BsaJI | CCNNGG | 1 cut(s) | 28 |
| BsaWI | WCCGGW | 1 cut(s) | 242 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 284, 314 |
| BseDI | CCNNGG | 1 cut(s) | 28 |
| BseMII | CTCAG | 1 cut(s) | 244 |
| BseRI | GAGGAG | 2 cut(s) | 384, 441 |
| BseXI | GCAGC | 1 cut(s) | 400 |
| BshFI | GGCC | 1 cut(s) | 348 |
| BsiSI | CCGG | 1 cut(s) | 243 |
| BsmAI | GTCTC | 2 cut(s) | 366, 451 |
| BsnI | GGCC | 1 cut(s) | 348 |
| Bsp143I | GATC | 1 cut(s) | 393 |
| BspACI | CCGC | 1 cut(s) | 212 |
| BspANI | GGCC | 1 cut(s) | 348 |
| BspCNI | CTCAG | 1 cut(s) | 243 |
| BspHI | TCATGA | 1 cut(s) | 67 |
| BssECI | CCNNGG | 1 cut(s) | 28 |
| BssMI | GATC | 1 cut(s) | 393 |
| BssT1I | CCWWGG | 1 cut(s) | 28 |
| Bst4CI | ACNGT | 1 cut(s) | 226 |
| Bst6I | CTCTTC | 3 cut(s) | 175, 213, 463 |
| BstDEI | CTNAG | 1 cut(s) | 230 |
| BstKTI | GATC | 1 cut(s) | 396 |
| BstMAI | GTCTC | 2 cut(s) | 366, 451 |
| BstMBI | GATC | 1 cut(s) | 393 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 211 |
| BstNSI | RCATGY | 1 cut(s) | 130 |
| BstV1I | GCAGC | 1 cut(s) | 400 |
| BsuRI | GGCC | 1 cut(s) | 348 |
| BtsI | GCAGTG | 1 cut(s) | 183 |
| BtsIMutI | CAGTG | 2 cut(s) | 183, 222 |
| CciI | TCATGA | 1 cut(s) | 67 |
| CviAII | CATG | 2 cut(s) | 68, 127 |
| CviJI | RGCY | 4 cut(s) | 198, 234, 348, 428 |
| CviKI_1 | RGCY | 4 cut(s) | 198, 234, 348, 428 |
| DdeI | CTNAG | 1 cut(s) | 230 |
| DpnI | GATC | 1 cut(s) | 395 |
| DpnII | GATC | 1 cut(s) | 393 |
| Eam1104I | CTCTTC | 3 cut(s) | 175, 213, 463 |
| EarI | CTCTTC | 3 cut(s) | 175, 213, 463 |
| EciI | GGCGGA | 1 cut(s) | 201 |
| Eco130I | CCWWGG | 1 cut(s) | 28 |
| EcoT14I | CCWWGG | 1 cut(s) | 28 |
| ErhI | CCWWGG | 1 cut(s) | 28 |
| FaeI | CATG | 2 cut(s) | 71, 130 |
| FaiI | YATR | 6 cut(s) | 13, 69, 128, 195, 384, 392 |
| FatI | CATG | 2 cut(s) | 67, 126 |
| FbaI | TGATCA | 1 cut(s) | 393 |
| Fnu4HI | GCNGC | 1 cut(s) | 414 |
| Fsp4HI | GCNGC | 1 cut(s) | 414 |
| FspBI | CTAG | 2 cut(s) | 366, 429 |
| GluI | GCNGC | 1 cut(s) | 414 |
| HaeIII | GGCC | 1 cut(s) | 348 |
| HapII | CCGG | 1 cut(s) | 243 |
| Hin1II | CATG | 2 cut(s) | 71, 130 |
| HinfI | GANTC | 5 cut(s) | 136, 252, 311, 353, 407 |
| HpaII | CCGG | 1 cut(s) | 243 |
| Hpy166II | GTNNAC | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 2 cut(s) | 135, 358 |
| Hpy188III | TCNNGA | 4 cut(s) | 68, 113, 263, 397 |
| Hpy8I | GTNNAC | 1 cut(s) | 35 |
| HpyAV | CCTTC | 2 cut(s) | 174, 372 |
| HpyCH4III | ACNGT | 1 cut(s) | 226 |
| HpyCH4V | TGCA | 1 cut(s) | 317 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 211 |
| HpyF3I | CTNAG | 1 cut(s) | 230 |
| Hsp92II | CATG | 2 cut(s) | 71, 130 |
| Ksp22I | TGATCA | 1 cut(s) | 393 |
| Kzo9I | GATC | 1 cut(s) | 393 |
| LmnI | GCTCC | 1 cut(s) | 305 |
| LpnPI | CCDG | 3 cut(s) | 231, 256, 422 |
| Lsp1109I | GCAGC | 1 cut(s) | 400 |
| MaeI | CTAG | 2 cut(s) | 366, 429 |
| MaeIII | GTNAC | 1 cut(s) | 181 |
| MalI | GATC | 1 cut(s) | 395 |
| MboI | GATC | 1 cut(s) | 393 |
| MboII | GAAGA | 5 cut(s) | 17, 162, 200, 272, 450 |
| MmeI | TCCRAC | 1 cut(s) | 229 |
| MroXI | GAANNNNTTC | 1 cut(s) | 279 |
| MseI | TTAA | 2 cut(s) | 80, 236 |
| MspI | CCGG | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 211 |
| NdeII | GATC | 1 cut(s) | 393 |
| NlaIII | CATG | 2 cut(s) | 71, 130 |
| NmuCI | GTSAC | 1 cut(s) | 181 |
| NspI | RCATGY | 1 cut(s) | 130 |
| PagI | TCATGA | 1 cut(s) | 67 |
| PdmI | GAANNNNTTC | 1 cut(s) | 279 |
| PfeI | GAWTC | 5 cut(s) | 136, 252, 311, 353, 407 |
| PkrI | GCNGC | 1 cut(s) | 415 |
| SaqAI | TTAA | 2 cut(s) | 80, 236 |
| SatI | GCNGC | 1 cut(s) | 414 |
| Sau3AI | GATC | 1 cut(s) | 393 |
| SetI | ASST | 4 cut(s) | 30, 166, 236, 383 |
| SsiI | CCGC | 1 cut(s) | 212 |
| SspMI | CTAG | 2 cut(s) | 366, 429 |
| StyI | CCWWGG | 1 cut(s) | 28 |
| TaaI | ACNGT | 1 cut(s) | 226 |
| TaqI | TCGA | 1 cut(s) | 255 |
| TfiI | GAWTC | 5 cut(s) | 136, 252, 311, 353, 407 |
| Tru1I | TTAA | 2 cut(s) | 80, 236 |
| Tru9I | TTAA | 2 cut(s) | 80, 236 |
| TscAI | CASTG | 2 cut(s) | 190, 229 |
| TseFI | GTSAC | 1 cut(s) | 181 |
| TseI | GCWGC | 1 cut(s) | 413 |
| Tsp45I | GTSAC | 1 cut(s) | 181 |
| TspDTI | ATGAA | 1 cut(s) | 84 |
| TspRI | CASTG | 2 cut(s) | 190, 229 |
| XceI | RCATGY | 1 cut(s) | 130 |
| XmnI | GAANNNNTTC | 1 cut(s) | 279 |
| XspI | CTAG | 2 cut(s) | 366, 429 |