Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0026704

Physical Location & Seq

Genomic Coordinates Forward (+)

13352917 .. 13353672

Gene Structure 756 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G31310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 567 bp

ATGGGAGGTTTAGGCTCACCATGTGGAGGATGCAAGTTCTTGCGTAGGAAATGTGTAGAGGGTTGTGTATTTGCACCATACTTTTGCTACGAAGAAGGATCTTCTAATTTTGCAGCCATTCACAAAGTGTTTGGAGCTAGCAACTTCTCTAAGCTCATTTCTCATCTCCCTGATCATGACCGATGTGACGCCGTACGAACCATCTCTTACGAGGCTCACTCTCGTCTCCATGATCCTATTTACGGCTGCGTCTCCCAAATCTTCTCCCTCCAACAACAGGTTGTTAGTTTACAAGCACAAGTGGTTCTACTTAGAGAAGAAGCTTCGAGAAGGTTCCCTCAAGATGATCCTGGTTGTAATATGAAGCAACAAGAAAAGGTTCTTGCTCAACAAATGCCACAAGATCTTCACAATTGGTTTCACCAAGGAATCTTGGACTCAGACTTCGACCCAATGAGTGGTACTACACGCGACAATGAGCGGTCCATGGATCATAATGAGTCTCCTTGTAGCTCAAATGAATCACTTAATTACTACCAGGAGGTCAATTTTCCTTGGTCTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0010015 GO:0010101 GO:0010102 GO:0010311 GO:0022622 GO:0032501 GO:0032502 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046983 GO:0048364 GO:0048527 GO:0048528 GO:0048646 GO:0048731 GO:0048830 GO:0048856 GO:0090696 GO:0090697 GO:0090698 GO:0099402 GO:1905392 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LOB

Protein Analysis

188

Amino Acids

21.3

Weight (kDa)

5.55

Isoelectric Point (pI)

57.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LOB	PF03195	7 - 104	1.4e-33	Lateral organ boundaries (LOB) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0026704)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31310
prunus_persica	Prupe.1G033400_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	458
AccBSI	CCGCTC	1 cut(s)	481
AccII	CGCG	1 cut(s)	471
AciI	CCGC	1 cut(s)	481
AclWI	GGATC	4 cut(s)	106, 227, 341, 498
AcyI	GRCGYC	1 cut(s)	189
AdeI	CACNNNGTG	2 cut(s)	23, 127
AfaI	GTAC	2 cut(s)	195, 463
AfiI	CCNNNNNNNGG	4 cut(s)	26, 242, 277, 458
AjnI	CCWGG	2 cut(s)	349, 537
AluBI	AGCT	4 cut(s)	137, 154, 323, 513
AluI	AGCT	4 cut(s)	137, 154, 323, 513
Alw26I	GTCTC	3 cut(s)	230, 256, 507
AlwI	GGATC	4 cut(s)	106, 227, 341, 498
ApeKI	GCWGC	2 cut(s)	113, 246
ArsI	GACNNNNNNTTYG	2 cut(s)	428, 460
Asp700I	GAANNNNTTC	1 cut(s)	378
AspS9I	GGNCC	1 cut(s)	483
AsuHPI	GGTGA	2 cut(s)	9, 413
AsuNHI	GCTAGC	1 cut(s)	137
AvaII	GGWCC	1 cut(s)	483
BbvI	GCAGC	2 cut(s)	125, 233
BccI	CCATC	1 cut(s)	209
BceAI	ACGGC	2 cut(s)	176, 259
BciT130I	CCWGG	2 cut(s)	351, 539
BclI	TGATCA	1 cut(s)	172
BcoDI	GTCTC	3 cut(s)	230, 256, 507
BfaI	CTAG	1 cut(s)	138
BglII	AGATCT	1 cut(s)	403
BisI	GCNGC	2 cut(s)	114, 247
BlsI	GCNGC	2 cut(s)	115, 248
Bme1390I	CCNGG	2 cut(s)	351, 539
Bme18I	GGWCC	1 cut(s)	483
BmgT120I	GGNCC	1 cut(s)	483
BmiI	GGNNCC	1 cut(s)	335
BmrFI	CCNGG	2 cut(s)	351, 539
BmsI	GCATC	1 cut(s)	20
BmtI	GCTAGC	1 cut(s)	141
BplI	GAGNNNNNCTC	2 cut(s)	203, 235
BpuEI	CTTGAG	1 cut(s)	324
BsaHI	GRCGYC	1 cut(s)	189
BsaJI	CCNNGG	3 cut(s)	424, 486, 554
Bsc4I	CCNNNNNNNGG	4 cut(s)	26, 242, 277, 458
BseBI	CCWGG	2 cut(s)	351, 539
BseDI	CCNNGG	3 cut(s)	424, 486, 554
BseGI	GGATG	1 cut(s)	35
BseLI	CCNNNNNNNGG	4 cut(s)	26, 242, 277, 458
BseMII	CTCAG	1 cut(s)	453
BseXI	GCAGC	2 cut(s)	125, 233
Bsh1236I	CGCG	1 cut(s)	471
BsiWI	CGTACG	1 cut(s)	193
BslI	CCNNNNNNNGG	4 cut(s)	26, 242, 277, 458
BsmAI	GTCTC	3 cut(s)	230, 256, 507
BsmBI	CGTCTC	2 cut(s)	230, 256
Bsp143I	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
Bsp19I	CCATGG	1 cut(s)	486
BspACI	CCGC	1 cut(s)	481
BspCNI	CTCAG	1 cut(s)	452
BspFNI	CGCG	1 cut(s)	471
BspHI	TCATGA	1 cut(s)	175
BspLI	GGNNCC	1 cut(s)	335
BspOI	GCTAGC	1 cut(s)	141
BspPI	GGATC	4 cut(s)	106, 227, 341, 498
BsrBI	CCGCTC	1 cut(s)	481
BssECI	CCNNGG	3 cut(s)	424, 486, 554
BssMI	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
BssNI	GRCGYC	1 cut(s)	189
BssT1I	CCWWGG	3 cut(s)	424, 486, 554
Bst2UI	CCWGG	2 cut(s)	351, 539
BstACI	GRCGYC	1 cut(s)	189
BstC8I	GCNNGC	1 cut(s)	139
BstDEI	CTNAG	3 cut(s)	150, 311, 439
BstDSI	CCRYGG	1 cut(s)	486
BstF5I	GGATG	1 cut(s)	35
BstFNI	CGCG	1 cut(s)	471
BstKTI	GATC	6 cut(s)	101, 175, 235, 349, 406, 493
BstMAI	GTCTC	3 cut(s)	230, 256, 507
BstMBI	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
BstNI	CCWGG	2 cut(s)	351, 539
BstSCI	CCNGG	2 cut(s)	349, 537
BstUI	CGCG	1 cut(s)	471
BstV1I	GCAGC	2 cut(s)	125, 233
BstX2I	RGATCY	2 cut(s)	98, 403
BstYI	RGATCY	2 cut(s)	98, 403
BtgI	CCRYGG	1 cut(s)	486
BtsCI	GGATG	1 cut(s)	35
Cac8I	GCNNGC	1 cut(s)	139
CciI	TCATGA	1 cut(s)	175
Cfr13I	GGNCC	1 cut(s)	483
CseI	GACGC	2 cut(s)	197, 238
Csp6I	GTAC	2 cut(s)	194, 462
CviAII	CATG	4 cut(s)	21, 176, 230, 487
CviJI	RGCY	8 cut(s)	15, 116, 137, 154, 215, 246, 323, 513
CviKI_1	RGCY	8 cut(s)	15, 116, 137, 154, 215, 246, 323, 513
CviQI	GTAC	2 cut(s)	194, 462
DdeI	CTNAG	3 cut(s)	150, 311, 439
DpnI	GATC	6 cut(s)	100, 174, 234, 348, 405, 492
DpnII	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
DraIII	CACNNNGTG	2 cut(s)	23, 127
Eco130I	CCWWGG	3 cut(s)	424, 486, 554
Eco47I	GGWCC	1 cut(s)	483
EcoRII	CCWGG	2 cut(s)	349, 537
EcoT14I	CCWWGG	3 cut(s)	424, 486, 554
ErhI	CCWWGG	3 cut(s)	424, 486, 554
Esp3I	CGTCTC	2 cut(s)	230, 256
FaeI	CATG	4 cut(s)	24, 179, 233, 490
FaiI	YATR	7 cut(s)	22, 79, 177, 231, 362, 488, 495
FatI	CATG	4 cut(s)	20, 175, 229, 486
FbaI	TGATCA	1 cut(s)	172
Fnu4HI	GCNGC	2 cut(s)	114, 247
FokI	GGATG	1 cut(s)	42
Fsp4HI	GCNGC	2 cut(s)	114, 247
FspBI	CTAG	1 cut(s)	138
GluI	GCNGC	2 cut(s)	114, 247
HgaI	GACGC	2 cut(s)	197, 238
Hin1I	GRCGYC	1 cut(s)	189
Hin1II	CATG	4 cut(s)	24, 179, 233, 490
HindIII	AAGCTT	1 cut(s)	321
HinfI	GANTC	4 cut(s)	429, 437, 500, 521
HphI	GGTGA	2 cut(s)	9, 413
Hpy166II	GTNNAC	1 cut(s)	290
Hpy188I	TCNGA	1 cut(s)	442
Hpy188III	TCNNGA	3 cut(s)	176, 327, 341
Hpy8I	GTNNAC	1 cut(s)	290
HpyAV	CCTTC	2 cut(s)	89, 324
HpyCH4V	TGCA	3 cut(s)	33, 74, 113
HpyF3I	CTNAG	3 cut(s)	150, 311, 439
Hsp92I	GRCGYC	1 cut(s)	189
Hsp92II	CATG	4 cut(s)	24, 179, 233, 490
Ksp22I	TGATCA	1 cut(s)	172
Kzo9I	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
LmnI	GCTCC	1 cut(s)	134
LpnPI	CCDG	6 cut(s)	183, 263, 336, 363, 524, 551
Lsp1109I	GCAGC	2 cut(s)	125, 233
LweI	GCATC	1 cut(s)	20
MaeI	CTAG	1 cut(s)	138
MaeIII	GTNAC	1 cut(s)	185
MalI	GATC	6 cut(s)	100, 174, 234, 348, 405, 492
MbiI	CCGCTC	1 cut(s)	481
MboI	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
MboII	GAAGA	5 cut(s)	93, 104, 253, 329, 398
MfeI	CAATTG	1 cut(s)	412
MflI	RGATCY	2 cut(s)	98, 403
MluCI	AATT	4 cut(s)	106, 412, 529, 547
MlyI	GAGTC	2 cut(s)	431, 509
MmeI	TCCRAC	1 cut(s)	295
MnlI	CCTC	6 cut(s)	20, 52, 205, 278, 348, 535
MroXI	GAANNNNTTC	1 cut(s)	378
MseI	TTAA	1 cut(s)	528
MspR9I	CCNGG	2 cut(s)	351, 539
MunI	CAATTG	1 cut(s)	412
MvaI	CCWGG	2 cut(s)	351, 539
MvnI	CGCG	1 cut(s)	471
NcoI	CCATGG	1 cut(s)	486
NdeII	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
NheI	GCTAGC	1 cut(s)	137
NlaIII	CATG	4 cut(s)	24, 179, 233, 490
NlaIV	GGNNCC	1 cut(s)	335
NmuCI	GTSAC	1 cut(s)	185
PagI	TCATGA	1 cut(s)	175
PdmI	GAANNNNTTC	1 cut(s)	378
PfeI	GAWTC	2 cut(s)	429, 521
Pfl23II	CGTACG	1 cut(s)	193
PflMI	CCANNNNNTGG	1 cut(s)	458
PkrI	GCNGC	2 cut(s)	115, 248
PleI	GAGTC	2 cut(s)	431, 508
PpsI	GAGTC	2 cut(s)	431, 508
Psp6I	CCWGG	2 cut(s)	349, 537
PspGI	CCWGG	2 cut(s)	349, 537
PspLI	CGTACG	1 cut(s)	193
PspN4I	GGNNCC	1 cut(s)	335
PspPI	GGNCC	1 cut(s)	483
PsuI	RGATCY	2 cut(s)	98, 403
RsaI	GTAC	2 cut(s)	195, 463
RsaNI	GTAC	2 cut(s)	194, 462
SaqAI	TTAA	1 cut(s)	528
SatI	GCNGC	2 cut(s)	114, 247
Sau3AI	GATC	6 cut(s)	98, 172, 232, 346, 403, 490
Sau96I	GGNCC	1 cut(s)	483
SchI	GAGTC	2 cut(s)	431, 509
ScrFI	CCNGG	2 cut(s)	351, 539
SetI	ASST	9 cut(s)	10, 139, 156, 282, 325, 335, 381, 515, 546
SfaNI	GCATC	1 cut(s)	20
SinI	GGWCC	1 cut(s)	483
SmlI	CTYRAG	1 cut(s)	339
SmoI	CTYRAG	1 cut(s)	339
Sse9I	AATT	4 cut(s)	106, 412, 529, 547
SsiI	CCGC	1 cut(s)	481
SspMI	CTAG	1 cut(s)	138
StyD4I	CCNGG	2 cut(s)	349, 537
StyI	CCWWGG	3 cut(s)	424, 486, 554
TaqI	TCGA	2 cut(s)	326, 447
TaqII	GACCGA	1 cut(s)	195
TasI	AATT	4 cut(s)	106, 412, 529, 547
TfiI	GAWTC	2 cut(s)	429, 521
Tru1I	TTAA	1 cut(s)	528
Tru9I	TTAA	1 cut(s)	528
TseFI	GTSAC	1 cut(s)	185
TseI	GCWGC	2 cut(s)	113, 246
Tsp45I	GTSAC	1 cut(s)	185
TspDTI	ATGAA	2 cut(s)	377, 534
Van91I	CCANNNNNTGG	1 cut(s)	458
VpaK11BI	GGWCC	1 cut(s)	483
XmnI	GAANNNNTTC	1 cut(s)	378
XspI	CTAG	1 cut(s)	138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.