AT3G05660

Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro IPR013210), Leucine-rich repeat (InterPro IPR001611)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0011881
Physical Location & Seq
Reverse (-)
1648843 .. 1652149
3307 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G05660.1

Sequence Viewer

Length: 2628 bp
ATGAGTCTCATTCCTATTACTTTTTATTTTCTCTTCTTGTTCTTTTCTAATTTTCGAGGTGTTTTTGCTGTTCCTAATATACACTTATGTCATTTCGAACAAAGAGATGCACTTCTCGAGTTCAAGAACGAGTTTAAGATTAAGAAGCCTTGTTTTGGTTGTCCAAGTCCTCTGAAGACAAAGTCATGGGAGAATGGCAGCGACTGTTGTCATTGGGATGGTATTACTTGCGATGCTAAGACCGGGGAAGTAATCGAGATAGACCTTATGTGCAGCTGCCTCCATGGCTGGTTTCATTCCAACAGTAATCTTTCTATGCTTCAAAATTTCCATTTTCTAACCACTCTAGACCTTTCATATAATCATTTGAGTGGTCAAATCTCATCTTCTATTGGAAACCTTTCTCATCTCACCACTCTCGACCTTTCTGGAAATAACTTCAGTGGTTGGATTCCTTCTTCCCTTGGAAACCTTTTTCACCTCACCTCTCTCCACCTCTATGATAACAATTTTGGTGGTGAAATCCCATCTTCACTTGGAAATCTGTCGTATCTCACCTTTCTCGACCTATCTACTAACAATTTTGTTGGTGAAATCCCTTCTTCTTTTGGCAGTTTGAACCAATTGTCTATTTTACGTCTTGATAATAATAAGCTTAGTGGTAACCTCCCACTTGAAGTAATCAATCTTACAAAGTTGTCAGAGATATCACTCTCTCACAATCAGTTCACAGGCACGCTTCCTCCTAACATCACTTCACTCTCCATCTTGGAGTCCTTTTCGGCAAGTGGAAACAATTTCGTTGGAACTATCCCTTCCTCTCTCTTCACCATTCCTTCTATAACTCTTATTTTTTTGGACAATAACCAACTCAGCGGCACTCTTGAGTTTGGGAATATATCTTCACCGTCTAATTTACTAGTGTTACAACTTGGCGGTAACAACTTGAGAGGTCCAATCCCTACATCTATTTCCAGATTAGTCAACCTTAGGACACTTGACCTTTCCCATTTCAACATCCAAGGCCAAGTTGACTTTAATATCTTCTCGCATCTCAAGTTGCTAGGAAACCTTTACCTATCCCATTCCAACACCACCACTACAATTGACTTGAATGCAGTCTTATCATGTTTCAAGATGCTCATTTCATTGGATCTCTCAGGCAACCATGTTTTAGTCACAAACAAAAGTTCAGTTTCTGACCCTCCTTTGGGATTGATAGGCTCTTTGAACTTATCAGGATGCGGTATCACCGAGTTTCCAGATATCCTAAGAACGCAACGCCAAATGAGGACGCTAGACATTTCCAACAACAAAATCAAAGGCCAAGTGCCTAGCTGGTTACTATTACAGTTGGAGTACATGCATATCTCCAACAACAATTTCATCGGTTTCGAAAGATCAACGAAACTTGAAAAAACCGTAGTCCCAAAACCATCTATGAAGCACTTTTTTGGCTCCAATAACAATTTCAGTGGAAAGATTCCATCTTTCATATGCTCGTTGCGCTCTCTAATCATTCTCGATTTATCTAACAACAACTTCAGTGGTGCAATCCCTCCTTGTGTGGGAAAATTCAAGAGTACTCTTTCAGATCTTAACCTACGTCGGAATCGTCTTAGTGGAAGTCTTCCAAAGACTATAATAAAAAGTTTAAGGTCTCTTGATGTGAGTCATAACGAACTGGAGGGAAAGCTTCCAAGATCTTTGATCCACTTCTCTACTCTTGAAGTTTTGAATGTAGAAAGCAACAGAATCAACGACACGTTTCCGTTCTGGTTGAGTTCTCTAAAAAAGCTGCAAGTTCTTGTCTTACGCTCCAACGCATTTCACGGACGGATACACAAGACTCGGTTTCCTAAGTTGCGAATCATCGACATATCCCGTAATCACTTCAATGGGACATTGCCATCAGATTGCTTTGTGGAGTGGACTGGGATGCACTCACTTGAAAAAAATGAAGATCGGTTTAACGAAAAGTACATGGGATCAGGCTATTACCATGATTCAATGGTTCTGATGAATAAAGGCTTAGAGATGGAGCTGGTACGTATCCTAAAAATCTATACAGCTCTCGACTTCTCTGGAAACAAATTTGAAGGAGAGATTCCAAGATCCATCGGTCTATTGAAAGAACTTCATATCCTCAACTTGTCAAGCAATGGTTTCACCGGCCACATCCCATCATCTATGGGGAACCTGAGAGAGCTCGAGTCACTGGATGTTTCCCGAAACAAGCTTTCAGGAGAAATTCCACAAGAACTAGGGAACCTCTCGTACCTTGCGTACATGAACTTTTCTCATAACCAGCTTGTCGGTCAAGTACCAGGAGGCACCCAGTTTCGAACGCAATCCGCTTCGTCTTTTGAAGAAAACCTTGGACTTTGTGGTCGTCCTCTCGAAGAATGTAGAGTTGTCCATGAGCCGACGCCTTCAGGGGAATCAGAAACATTGGAATCAGAACAAGTCTTGAGTTGGATTGCAGCTGCCATAGGGTTCACACCTGGTATCGTGCTTGGATTGACCATTGGGCACATCGTGCTTTCCTCCAAACCGCGTTGGTTCTTCAAGGTGTTGTACATCAACAACAGTCGTAGACGCAGACGAACTCGTTCTGAGAAATCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_8

Protein Analysis

875

Amino Acids

97.61

Weight (kDa)

8.26

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 33 - 78 1e-09 Leucine rich repeat N-terminal domain
LRR_14 PF23598 99 - 167 4.6e-06 Leucine-rich repeat region
LRR_4 PF12799 113 - 147 7.4e-06 Leucine Rich repeats (2 copies)
LRR_14 PF23598 154 - 389 2e-18 Leucine-rich repeat region
LRR_8 PF13855 575 - 632 4.4e-06 Leucine rich repeat
LRR_14 PF23598 701 - 764 9.3e-07 Leucine-rich repeat region
LRR_8 PF13855 712 - 771 1.1e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2388
AccB1I GGYRCC 1 cut(s) 2333
AccI GTMKAC 1 cut(s) 2596
AccII CGCG 1 cut(s) 2557
AciI CCGC 5 cut(s) 876, 936, 1245, 2355, 2555
AclWI GGATC 4 cut(s) 1161, 1705, 1996, 2109
AcoI YGGCCR 1 cut(s) 2173
AcsI RAATTY 4 cut(s) 325, 1574, 2093, 2250
AcuI CTGAAG 4 cut(s) 194, 424, 1528, 2418
AcyI GRCGYC 1 cut(s) 2429
AdeI CACNNNGTG 1 cut(s) 2539
AfaI GTAC 8 cut(s) 1361, 1585, 1982, 2049, 2279, 2288, 2325, 2579
AfiI CCNNNNNNNGG 4 cut(s) 155, 1210, 1211, 1568
AflIII ACRYGT 1 cut(s) 1764
AhlI ACTAGT 1 cut(s) 919
AjnI CCWGG 2 cut(s) 2326, 2503
AjuI GAANNNNNNNTTGG 6 cut(s) 1367, 1399, 1454, 1486, 2361, 2393
AloI GAACNNNNNNTCC 2 cut(s) 2127, 2159
Alw21I GWGCWC 1 cut(s) 2211
Alw26I GTCTC 2 cut(s) 11, 1665
AlwI GGATC 4 cut(s) 1161, 1705, 1996, 2109
AlwNI CAGNNNCTG 2 cut(s) 204, 1199
Ama87I CYCGRG 2 cut(s) 116, 2210
AoxI GGCC 3 cut(s) 1024, 1324, 2173
ApeKI GCWGC 6 cut(s) 198, 273, 276, 1798, 2483, 2486
ApoI RAATTY 4 cut(s) 325, 1574, 2093, 2250
Asp700I GAANNNNTTC 2 cut(s) 400, 2611
AspLEI GCGC 1 cut(s) 1509
AspS9I GGNCC 1 cut(s) 953
AsuC2I CCSGG 1 cut(s) 244
AsuII TTCGAA 3 cut(s) 96, 1395, 2344
AvaI CYCGRG 2 cut(s) 116, 2210
AvaII GGWCC 1 cut(s) 953
AxyI CCTNAGG 1 cut(s) 989
BaeGI GKGCMC 1 cut(s) 2535
BanI GGYRCC 1 cut(s) 2333
BanII GRGCYC 1 cut(s) 2211
BbsI GAAGAC 2 cut(s) 182, 1622
Bbv12I GWGCWC 1 cut(s) 2211
BbvI GCAGC 6 cut(s) 210, 263, 285, 1785, 2473, 2495
BccI CCATC 9 cut(s) 212, 535, 773, 1444, 1495, 1918, 2032, 2126, 2191
BciT130I CCWGG 2 cut(s) 2328, 2505
BciVI GTATCC 2 cut(s) 1833, 2063
BcnI CCSGG 1 cut(s) 244
BcoDI GTCTC 2 cut(s) 11, 1665
BcuI ACTAGT 1 cut(s) 919
BfaI CTAG 6 cut(s) 347, 920, 1064, 1298, 1335, 2264
BfuI GTATCC 2 cut(s) 1833, 2063
BglI GCCNNNNNGGC 1 cut(s) 285
BglII AGATCT 2 cut(s) 1594, 1703
BisI GCNGC 7 cut(s) 199, 274, 277, 877, 1799, 2484, 2487
BlsI GCNGC 7 cut(s) 200, 275, 278, 878, 1800, 2485, 2488
BmcAI AGTACT 1 cut(s) 1585
Bme1390I CCNGG 3 cut(s) 244, 2328, 2505
Bme18I GGWCC 1 cut(s) 953
BmeT110I CYCGRG 2 cut(s) 116, 2210
BmgT120I GGNCC 1 cut(s) 953
BmiI GGNNCC 4 cut(s) 1459, 2198, 2270, 2335
BmrFI CCNGG 3 cut(s) 244, 2328, 2505
BmrI ACTGGG 2 cut(s) 1944, 2332
BmsI GCATC 6 cut(s) 97, 223, 1060, 1128, 1232, 1929
BmuI ACTGGG 2 cut(s) 1944, 2332
BoxI GACNNNNGTC 1 cut(s) 207
BpiI GAAGAC 2 cut(s) 182, 1622
BpmI CTGGAG 1 cut(s) 1706
Bpu14I TTCGAA 3 cut(s) 96, 1395, 2344
BpuEI CTTGAG 4 cut(s) 905, 967, 1040, 2491
BpuMI CCSGG 1 cut(s) 244
BsaAI YACGTR 1 cut(s) 2051
BsaHI GRCGYC 1 cut(s) 2429
BsaI GGTCTC 1 cut(s) 1665
BsaJI CCNNGG 5 cut(s) 243, 283, 463, 1021, 2377
BsaXI ACNNNNNCTCC 2 cut(s) 727, 757
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 1210, 1211, 1568
Bse118I RCCGGY 1 cut(s) 2171
Bse1I ACTGG 4 cut(s) 1689, 1939, 2223, 2338
Bse21I CCTNAGG 1 cut(s) 989
Bse3DI GCAATG 2 cut(s) 1904, 2167
BseBI CCWGG 2 cut(s) 2328, 2505
BseDI CCNNGG 5 cut(s) 243, 283, 463, 1021, 2377
BseGI GGATG 6 cut(s) 223, 1017, 1247, 1944, 2178, 2227
BseLI CCNNNNNNNGG 4 cut(s) 155, 1210, 1211, 1568
BseMI GCAATG 2 cut(s) 1904, 2167
BseMII CTCAG 4 cut(s) 886, 1173, 2192, 2607
BseNI ACTGG 4 cut(s) 1689, 1939, 2223, 2338
BseSI GKGCMC 1 cut(s) 2535
BseXI GCAGC 6 cut(s) 210, 263, 285, 1785, 2473, 2495
BsgI GTGCAG 1 cut(s) 292
Bsh1236I CGCG 1 cut(s) 2557
BshFI GGCC 3 cut(s) 1026, 1326, 2175
BshNI GGYRCC 1 cut(s) 2333
BsiHKAI GWGCWC 1 cut(s) 2211
BsiHKCI CYCGRG 2 cut(s) 116, 2210
BsiSI CCGG 2 cut(s) 243, 2172
BslFI GGGAC 2 cut(s) 1412, 1915
BslI CCNNNNNNNGG 4 cut(s) 155, 1210, 1211, 1568
BsmAI GTCTC 2 cut(s) 11, 1665
BsmFI GGGAC 2 cut(s) 1412, 1915
BsmI GAATGC 1 cut(s) 1120
BsnI GGCC 3 cut(s) 1026, 1326, 2175
Bso31I GGTCTC 1 cut(s) 1665
BsoBI CYCGRG 2 cut(s) 116, 2210
Bsp119I TTCGAA 3 cut(s) 96, 1395, 2344
Bsp1286I GDGCHC 2 cut(s) 2211, 2535
Bsp1407I TGTACA 1 cut(s) 2577
Bsp143I GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
Bsp19I CCATGG 1 cut(s) 283
BspACI CCGC 5 cut(s) 876, 936, 1245, 2355, 2555
BspANI GGCC 3 cut(s) 1026, 1326, 2175
BspCNI CTCAG 4 cut(s) 885, 1172, 2193, 2608
BspFNI CGCG 1 cut(s) 2557
BspLI GGNNCC 4 cut(s) 1459, 2198, 2270, 2335
BspPI GGATC 4 cut(s) 1161, 1705, 1996, 2109
BspT104I TTCGAA 3 cut(s) 96, 1395, 2344
BspT107I GGYRCC 1 cut(s) 2333
BspTNI GGTCTC 1 cut(s) 1665
BsrDI GCAATG 2 cut(s) 1904, 2167
BsrFI RCCGGY 1 cut(s) 2171
BsrGI TGTACA 1 cut(s) 2577
BsrI ACTGG 4 cut(s) 1689, 1939, 2223, 2338
BssAI RCCGGY 1 cut(s) 2171
BssECI CCNNGG 5 cut(s) 243, 283, 463, 1021, 2377
BssMI GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
BssNI GRCGYC 1 cut(s) 2429
BssT1I CCWWGG 4 cut(s) 283, 463, 1021, 2377
Bst2UI CCWGG 2 cut(s) 2328, 2505
Bst4CI ACNGT 6 cut(s) 206, 305, 909, 1353, 1423, 2591
Bst6I CTCTTC 2 cut(s) 38, 830
BstACI GRCGYC 1 cut(s) 2429
BstAPI GCANNNNNTGC 1 cut(s) 2539
BstAUI TGTACA 1 cut(s) 2577
BstBAI YACGTR 1 cut(s) 2051
BstBI TTCGAA 3 cut(s) 96, 1395, 2344
BstC8I GCNNGC 1 cut(s) 737
BstDSI CCRYGG 1 cut(s) 283
BstEII GGTNACC 1 cut(s) 662
BstF5I GGATG 6 cut(s) 223, 1017, 1247, 1944, 2178, 2227
BstFNI CGCG 1 cut(s) 2557
BstHHI GCGC 1 cut(s) 1509
BstKTI GATC 8 cut(s) 1156, 1403, 1597, 1706, 1713, 1966, 1991, 2117
BstMAI GTCTC 2 cut(s) 11, 1665
BstMBI GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
BstMWI GCNNNNNNNGC 3 cut(s) 285, 1506, 2539
BstNI CCWGG 2 cut(s) 2328, 2505
BstNSI RCATGY 1 cut(s) 1366
BstPAI GACNNNNGTC 1 cut(s) 207
BstPI GGTNACC 1 cut(s) 662
BstSCI CCNGG 3 cut(s) 242, 2326, 2503
BstSLI GKGCMC 1 cut(s) 2535
BstSNI TACGTA 1 cut(s) 2051
BstUI CGCG 1 cut(s) 2557
BstV1I GCAGC 6 cut(s) 210, 263, 285, 1785, 2473, 2495
BstV2I GAAGAC 2 cut(s) 182, 1622
BstX2I RGATCY 4 cut(s) 1153, 1594, 1703, 2114
BstYI RGATCY 4 cut(s) 1153, 1594, 1703, 2114
Bsu36I CCTNAGG 1 cut(s) 989
BsuI GTATCC 2 cut(s) 1833, 2063
BsuRI GGCC 3 cut(s) 1026, 1326, 2175
BtgI CCRYGG 1 cut(s) 283
BtgZI GCGATG 1 cut(s) 246
BtsCI GGATG 6 cut(s) 223, 1017, 1247, 1944, 2178, 2227
BtsIMutI CAGTG 4 cut(s) 448, 1480, 1552, 2216
Cac8I GCNNGC 1 cut(s) 737
CaiI CAGNNNCTG 2 cut(s) 204, 1199
CfoI GCGC 1 cut(s) 1509
Cfr10I RCCGGY 1 cut(s) 2171
Cfr13I GGNCC 1 cut(s) 953
CseI GACGC 3 cut(s) 1303, 2437, 2607
CsiI ACCWGGT 1 cut(s) 2503
Csp6I GTAC 8 cut(s) 1360, 1584, 1981, 2048, 2278, 2287, 2324, 2578
CspCI CAANNNNNGTGG 8 cut(s) 496, 531, 1087, 1122, 1456, 1491, 1528, 1563
CviAII CATG 9 cut(s) 186, 284, 1128, 1169, 1363, 1984, 2003, 2290, 2420
CviQI GTAC 8 cut(s) 1360, 1584, 1981, 2048, 2278, 2287, 2324, 2578
DpnI GATC 8 cut(s) 1155, 1402, 1596, 1705, 1712, 1965, 1990, 2116
DpnII GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
DraIII CACNNNGTG 1 cut(s) 2539
DrdI GACNNNNNNGTC 1 cut(s) 2388
DseDI GACNNNNNNGTC 1 cut(s) 2388
EaeI YGGCCR 1 cut(s) 2173
Eam1104I CTCTTC 2 cut(s) 38, 830
EarI CTCTTC 2 cut(s) 38, 830
Ecl136II GAGCTC 1 cut(s) 2209
Eco105I TACGTA 1 cut(s) 2051
Eco130I CCWWGG 4 cut(s) 283, 463, 1021, 2377
Eco24I GRGCYC 1 cut(s) 2211
Eco31I GGTCTC 1 cut(s) 1665
Eco32I GATATC 2 cut(s) 708, 1267
Eco47I GGWCC 1 cut(s) 953
Eco53kI GAGCTC 1 cut(s) 2209
Eco57I CTGAAG 4 cut(s) 194, 424, 1528, 2418
Eco81I CCTNAGG 1 cut(s) 989
Eco88I CYCGRG 2 cut(s) 116, 2210
Eco91I GGTNACC 1 cut(s) 662
EcoICRI GAGCTC 1 cut(s) 2209
EcoO65I GGTNACC 1 cut(s) 662
EcoRII CCWGG 2 cut(s) 2326, 2503
EcoRV GATATC 2 cut(s) 708, 1267
EcoT14I CCWWGG 4 cut(s) 283, 463, 1021, 2377
EcoT22I ATGCAT 1 cut(s) 1368
EcoT38I GRGCYC 1 cut(s) 2211
ErhI CCWWGG 4 cut(s) 283, 463, 1021, 2377
FaeI CATG 9 cut(s) 189, 287, 1131, 1172, 1366, 1987, 2006, 2293, 2423
FalI AAGNNNNNCTT 2 cut(s) 2361, 2393
FaqI GGGAC 2 cut(s) 1412, 1915
FatI CATG 9 cut(s) 185, 283, 1127, 1168, 1362, 1983, 2002, 2289, 2419
FauNDI CATATG 1 cut(s) 1496
FblI GTMKAC 1 cut(s) 2596
Fnu4HI GCNGC 7 cut(s) 199, 274, 277, 877, 1799, 2484, 2487
FokI GGATG 6 cut(s) 230, 1004, 1254, 1951, 2165, 2234
FriOI GRGCYC 1 cut(s) 2211
Fsp4HI GCNGC 7 cut(s) 199, 274, 277, 877, 1799, 2484, 2487
FspBI CTAG 6 cut(s) 347, 920, 1064, 1298, 1335, 2264
GlaI GCGC 1 cut(s) 1508
GluI GCNGC 7 cut(s) 199, 274, 277, 877, 1799, 2484, 2487
GsuI CTGGAG 1 cut(s) 1706
HaeIII GGCC 3 cut(s) 1026, 1326, 2175
HapII CCGG 2 cut(s) 243, 2172
HgaI GACGC 3 cut(s) 1303, 2437, 2607
HhaI GCGC 1 cut(s) 1509
Hin1I GRCGYC 1 cut(s) 2429
Hin1II CATG 9 cut(s) 189, 287, 1131, 1172, 1366, 1987, 2006, 2293, 2423
Hin6I GCGC 1 cut(s) 1507
HinP1I GCGC 1 cut(s) 1507
HincII GTYRAC 2 cut(s) 985, 1033
HindII GTYRAC 2 cut(s) 985, 1033
HindIII AAGCTT 3 cut(s) 653, 1694, 2237
HpaII CCGG 2 cut(s) 243, 2172
Hpy166II GTNNAC 6 cut(s) 729, 985, 1033, 1932, 2499, 2597
Hpy8I GTNNAC 6 cut(s) 729, 985, 1033, 1932, 2499, 2597
Hpy99I CGWCG 2 cut(s) 1611, 2431
HpyAV CCTTC 6 cut(s) 465, 609, 825, 846, 2093, 2442
HpyCH4III ACNGT 6 cut(s) 206, 305, 909, 1353, 1423, 2591
HpyCH4IV ACGT 4 cut(s) 637, 1606, 1766, 2050
HpyCH4V TGCA 8 cut(s) 110, 273, 1118, 1366, 1553, 1801, 1942, 2483
HpyF10VI GCNNNNNNNGC 3 cut(s) 285, 1506, 2539
HpySE526I ACGT 4 cut(s) 637, 1606, 1766, 2050
Hsp92I GRCGYC 1 cut(s) 2429
Hsp92II CATG 9 cut(s) 189, 287, 1131, 1172, 1366, 1987, 2006, 2293, 2423
HspAI GCGC 1 cut(s) 1507
Kzo9I GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
LmnI GCTCC 3 cut(s) 1463, 1823, 2041
Lsp1109I GCAGC 6 cut(s) 210, 263, 285, 1785, 2473, 2495
LweI GCATC 6 cut(s) 97, 223, 1060, 1128, 1232, 1929
MabI ACCWGGT 1 cut(s) 2503
MaeI CTAG 6 cut(s) 347, 920, 1064, 1298, 1335, 2264
MaeII ACGT 4 cut(s) 637, 1606, 1766, 2050
MaeIII GTNAC 6 cut(s) 662, 924, 938, 1177, 1341, 2214
MalI GATC 8 cut(s) 1155, 1402, 1596, 1705, 1712, 1965, 1990, 2116
MboI GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
MfeI CAATTG 2 cut(s) 623, 1104
MflI RGATCY 4 cut(s) 1153, 1594, 1703, 2114
MhlI GDGCHC 2 cut(s) 2211, 2535
MlyI GAGTC 5 cut(s) 13, 782, 1681, 1843, 2222
Mph1103I ATGCAT 1 cut(s) 1368
MroXI GAANNNNTTC 2 cut(s) 400, 2611
MseI TTAA 6 cut(s) 135, 141, 1038, 1599, 1655, 1971
MslI CAYNNNNRTG 4 cut(s) 216, 369, 498, 1896
MspA1I CMGCKG 3 cut(s) 276, 876, 2486
MspI CCGG 2 cut(s) 243, 2172
MspR9I CCNGG 3 cut(s) 244, 2328, 2505
MunI CAATTG 2 cut(s) 623, 1104
Mva1269I GAATGC 1 cut(s) 1120
MvaI CCWGG 2 cut(s) 2328, 2505
MvnI CGCG 1 cut(s) 2557
MwoI GCNNNNNNNGC 3 cut(s) 285, 1506, 2539
NciI CCSGG 1 cut(s) 244
NcoI CCATGG 1 cut(s) 283
NdeI CATATG 1 cut(s) 1496
NdeII GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
NlaIII CATG 9 cut(s) 189, 287, 1131, 1172, 1366, 1987, 2006, 2293, 2423
NlaIV GGNNCC 4 cut(s) 1459, 2198, 2270, 2335
NmuCI GTSAC 2 cut(s) 1177, 2214
NsiI ATGCAT 1 cut(s) 1368
NspI RCATGY 1 cut(s) 1366
NspV TTCGAA 3 cut(s) 96, 1395, 2344
PaeR7I CTCGAG 2 cut(s) 116, 2210
PcsI WCGNNNNNNNCGW 2 cut(s) 1612, 2282
PctI GAATGC 1 cut(s) 1120
PdmI GAANNNNTTC 2 cut(s) 400, 2611
PfeI GAWTC 9 cut(s) 451, 1483, 1612, 1755, 1869, 2006, 2107, 2441, 2456
PflFI GACNNNGTC 1 cut(s) 181
PkrI GCNGC 7 cut(s) 200, 275, 278, 878, 1800, 2485, 2488
PleI GAGTC 5 cut(s) 12, 781, 1680, 1843, 2221
PpsI GAGTC 5 cut(s) 12, 781, 1680, 1843, 2221
Ppu21I YACGTR 1 cut(s) 2051
PshAI GACNNNNGTC 1 cut(s) 207
Psp124BI GAGCTC 1 cut(s) 2211
Psp6I CCWGG 2 cut(s) 2326, 2503
PspEI GGTNACC 1 cut(s) 662
PspGI CCWGG 2 cut(s) 2326, 2503
PspN4I GGNNCC 4 cut(s) 1459, 2198, 2270, 2335
PspPI GGNCC 1 cut(s) 953
PspXI VCTCGAGB 1 cut(s) 2210
PsrI GAACNNNNNNTAC 2 cut(s) 2261, 2293
PstNI CAGNNNCTG 2 cut(s) 204, 1199
PsuI RGATCY 4 cut(s) 1153, 1594, 1703, 2114
PsyI GACNNNGTC 1 cut(s) 181
PvuII CAGCTG 2 cut(s) 276, 2486
RsaI GTAC 8 cut(s) 1361, 1585, 1982, 2049, 2279, 2288, 2325, 2579
RsaNI GTAC 8 cut(s) 1360, 1584, 1981, 2048, 2278, 2287, 2324, 2578
RseI CAYNNNNRTG 4 cut(s) 216, 369, 498, 1896
SacI GAGCTC 1 cut(s) 2211
SaqAI TTAA 6 cut(s) 135, 141, 1038, 1599, 1655, 1971
SatI GCNGC 7 cut(s) 199, 274, 277, 877, 1799, 2484, 2487
Sau3AI GATC 8 cut(s) 1153, 1400, 1594, 1703, 1710, 1963, 1988, 2114
Sau96I GGNCC 1 cut(s) 953
ScaI AGTACT 1 cut(s) 1585
SchI GAGTC 5 cut(s) 13, 782, 1681, 1843, 2222
ScrFI CCNGG 3 cut(s) 244, 2328, 2505
SduI GDGCHC 2 cut(s) 2211, 2535
SexAI ACCWGGT 1 cut(s) 2503
SfaNI GCATC 6 cut(s) 97, 223, 1060, 1128, 1232, 1929
Sfr274I CTCGAG 2 cut(s) 116, 2210
SfuI TTCGAA 3 cut(s) 96, 1395, 2344
SinI GGWCC 1 cut(s) 953
SlaI CTCGAG 2 cut(s) 116, 2210
SmiMI CAYNNNNRTG 4 cut(s) 216, 369, 498, 1896
SmlI CTYRAG 6 cut(s) 116, 884, 946, 1055, 2210, 2470
SmoI CTYRAG 6 cut(s) 116, 884, 946, 1055, 2210, 2470
SnaBI TACGTA 1 cut(s) 2051
SpeI ACTAGT 1 cut(s) 919
SsiI CCGC 5 cut(s) 876, 936, 1245, 2355, 2555
SspMI CTAG 6 cut(s) 347, 920, 1064, 1298, 1335, 2264
SstI GAGCTC 1 cut(s) 2211
StyD4I CCNGG 3 cut(s) 242, 2326, 2503
StyI CCWWGG 4 cut(s) 283, 463, 1021, 2377
TaaI ACNGT 6 cut(s) 206, 305, 909, 1353, 1423, 2591
TaiI ACGT 4 cut(s) 640, 1609, 1769, 2053
TaqII GACCGA 2 cut(s) 2111, 2306
TatI WGTACW 4 cut(s) 1359, 1583, 1980, 2577
TauI GCSGC 1 cut(s) 879
TfiI GAWTC 9 cut(s) 451, 1483, 1612, 1755, 1869, 2006, 2107, 2441, 2456
Tru1I TTAA 6 cut(s) 135, 141, 1038, 1599, 1655, 1971
Tru9I TTAA 6 cut(s) 135, 141, 1038, 1599, 1655, 1971
TscAI CASTG 4 cut(s) 448, 1480, 1552, 2223
TseFI GTSAC 2 cut(s) 1177, 2214
TseI GCWGC 6 cut(s) 198, 273, 276, 1798, 2483, 2486
Tsp45I GTSAC 2 cut(s) 1177, 2214
TspGWI ACGGA 3 cut(s) 1761, 1848, 1852
TspRI CASTG 4 cut(s) 448, 1480, 1552, 2223
Tth111I GACNNNGTC 1 cut(s) 181
VpaK11BI GGWCC 1 cut(s) 953
XapI RAATTY 4 cut(s) 325, 1574, 2093, 2250
XbaI TCTAGA 1 cut(s) 346
XceI RCATGY 1 cut(s) 1366
XhoI CTCGAG 2 cut(s) 116, 2210
XmiI GTMKAC 1 cut(s) 2596
XmnI GAANNNNTTC 2 cut(s) 400, 2611
XspI CTAG 6 cut(s) 347, 920, 1064, 1298, 1335, 2264
ZrmI AGTACT 1 cut(s) 1585
Zsp2I ATGCAT 1 cut(s) 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.