Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0020965

Physical Location & Seq

Genomic Coordinates Reverse (-)

2321546 .. 2324568

Gene Structure 3023 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G07290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGCTGCTGATACATATCAGAAGTACTCGAAAGATCTTAGCTTTGGGGCGTCATGTTTTTCCTTCTAATGCCTTCTTCTCCGTCTCTTCTCGACCTTCTCTGTCTTCCTCGGACGAAGTGGCGGCTCATGATGTCGCATCTTTGCTAAAAACCCCCAATTGGGAGAAGAACAGTTCTCTTAAATCTCTAGTCTCTCACATGAATCCAAATGTCGCTTCACAGGTCATTTCGCTTCAACGCAGTGACAACGATATTTGCGTTCGCTTTTTCATGTGGGTCTGCAAGCATTCGTCGTATTGTTTCGACCCAACTCAGAAAAATCAGCTTTTGAAACTGATTGTTTCTTCCGGATTGTATCGAGTTGCGCATGCTGTTATTGTTGCGTTGATCAAGGAATGTAGTAGATGCGAGAAAGAGATGTTGAAACTAATGTATTGTTTTGATGAGCTGAGAGAAGTTTTTGGGTTCCGGTTAAATTACCCTTGTTACAGCTCTCTTTTGATGTCCTTAGCTAAACTTGATTTAGGATTTTTGGCTTACGTGACTTATAGAAGAATGGAAGCTGACGGATTTGTTGTTGGTATGATTGATTACAGAACCATTGTCAATGCTCTGTGTAAGAATGGATACACGGAAGCCGCTGAGATGTTCATGTCTAAGATTCTTAAAATTGGGTTTGTGTTAGATTCCCATATAGGCACTTCTTTGTTACTGGGTTTTTGCCGTGGATTGAATCTCAGAGATGCACTCAAGGTGTTTGATGTAATGTCTAAGGAGGTAACTTGTGCACCGAACTCTGTTAGTTACTCCATTTTGATTCACGGGTTGTGTGAAGTAGGGAGACTTGAAGAAGCATTTGGCCTAAAAGATCAAATGGGTGAGAAAGGTTGCCAACCAAGCACACGTACATATACTGTGCTTATTAAAGCCTTGTGCGATAGAGGTTTGATTGATAAAGCTTTTAACTTGTTTGATGAGATGATTCCTAGAGGGTGTAAACCAAACGTCCACACTTACACTGTTTTGATTGATGGGTTGTGTAGAGACGGAAAGATTGAAGAGGCTAATGGGGTTTGTCGAAAGATGGTTAAAGACAGGATATTTCCTAGTGTAATAACTTACAATGCGTTGATAAATGGCTACTGCAAAGATGGACGGGTTGTTCCCGCTTTTGAGCTTCTTACTGTAATGGAGAAGAGGGCTTGCAAACCAAATGTAAGAACTTTTAACGAGCTTATGGAAGGGTTGTGTAGAGTCGGGAAACCGTACAAGGCTGTGCACCTTTTGAAGAGAATGCTGGACAATGGCCTGTCACCTGACATTGTGAGCTATAATGTTTTGATCGATGGGCTTTGTAGAGAAGGCCATATGAATACGGCTTACAAGCTACTTAGCTCGATGAACTGCTTTGACATTGAGCCTGATTGTCTTACATTCACCGCTATAATAAATGCTTTCTGCAAACAAGGGAAGGCTGACGTTGCTAGCGCGTTTTTAGGTTTGATGCTTAGAAAAGGAATAAGCCTAGATGAAGTAACAGGTACAACTCTTATCGATGGTGTCTGTAAAGTCGGTAAAACCCGTGACGCATTGTTTATCCTGGAGACATTGGTTAAAATGAGAATTTTGACAACTCCTCACTCCCTGAATGTGATTCTTGATATGCTCAGTAAAGGTTGTAAAGTGAAGGAGGAATTAGCAATGCTTGGGAAAATCAATAAGCTTGGTTTAGTTCCTTCTGTGGTGACATACACAACATTGGTTGATGGGTTGATTCGATCAGGTGATATTACTGGTTCCTTCAGGATCCTAGAACTGATGAAGTTAAGTGGGTGTTTGCCGAATGTCTATCCATACACAATCATCATAAATGGTCTTTGTCAATTTGGAAGAGTCGAGGAAGCAGAGAAGCTTCTTTCTGCTATGCAAGATTCAGGAGTTTCACCAAACCATGTCACTTATACCGTTATGGTGAAAGGATATGTCAACAATGGAAAACTAGACCGTGCTCTTGAAACAGTAAGAGCAATGGTTGAAAGAGGATATGAACTAAATGACCGTATCTATTCTTCATTGTTACAGGGATTTGTCTTATCTCAAAAGGGTATTGATAATTCAGAAGAGAGTACAGTTTCCGATATTGCTCTTAGAGAAACCGATCCTGAATGTATCAACGAACTCATATCTGTGGTTGAACAACTTGGTGGGTGTATCAGCGGGTTATGTATTTTCTTGGTCACACGGTTATGCAAAGAGGGAAGAACGGATGAGTCCAACGATCTAGTCCAAAATGTACTCGAGAGAGGTGTTTTTCTTGAGAAGGCCATGGACATCATTATGGAATCTTATTGCAGCAAGAAGAAACACACCAAGTGTATGGAGCTGATAACACTTGTTCTCAAATCCGGATTTGTCCCGAGTTTCAAATCCTTCTGCCTAGTGATTCAAGGTTTGAAGAAGGAAGGAGATGCAGAGCGGGCGCGGGAGCTTGTAATGGAGCTTCTTACCTCAAATGGAGTTGTAGAGAAAAGTGGAGTGTTGACTTATGTTGAGTGTCTCATGGAAGGAGATGAAACTGGTGATTGCAGTGAAGTCATAGATTTGGTTGATCAATTGCACTGCAGAGAAAGACCCACCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

880

Amino Acids

98.06

Weight (kDa)

7.35

Isoelectric Point (pI)

25.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	234 - 277	9.5e-09	PPR repeat family
PPR_long	PF17177	246 - 342	8.9e-06	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	249 - 358	1.6e-06	Fungal tetratrico peptide repeats
PPR_1	PF12854	262 - 292	1.8e-10	PPR repeat
PPR_2	PF13041	264 - 313	3.2e-17	PPR repeat family
PPR	PF01535	267 - 297	3.2e-06	PPR repeat
PPR_1	PF12854	295 - 327	6e-12	PPR repeat
PPR	PF01535	303 - 328	2.8e-06	PPR repeat
PPR_2	PF13041	307 - 348	5.3e-16	PPR repeat family
PPR_3	PF13812	323 - 381	2.9e-12	Pentatricopeptide repeat domain
PPR_1	PF12854	330 - 363	2.8e-12	PPR repeat
PPR	PF01535	338 - 366	1.7e-06	PPR repeat
PPR_2	PF13041	342 - 375	6.4e-06	PPR repeat family
TPR_24	PF23276	352 - 464	8.6e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	367 - 398	5.5e-12	PPR repeat
PPR_2	PF13041	369 - 418	3.3e-17	PPR repeat family
PPR	PF01535	372 - 400	4.5e-06	PPR repeat
PPR_3	PF13812	393 - 449	5.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	402 - 432	1.9e-06	PPR repeat
PPR_2	PF13041	404 - 453	8.6e-15	PPR repeat family
PPR_1	PF12854	435 - 467	4e-12	PPR repeat
PPR_2	PF13041	439 - 488	2e-16	PPR repeat family
PPR_1	PF12854	471 - 502	3.9e-07	PPR repeat
PPR_2	PF13041	478 - 523	3.1e-10	PPR repeat family
PPR_3	PF13812	570 - 624	1.4e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	579 - 628	2e-13	PPR repeat family
PPR_long	PF17177	597 - 694	7e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	611 - 642	2.9e-11	PPR repeat
PPR	PF01535	619 - 647	1.3e-06	PPR repeat
PPR_2	PF13041	619 - 662	3.7e-14	PPR repeat family
PPR_3	PF13812	637 - 694	4.1e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	646 - 678	1.1e-06	PPR repeat
PPR	PF01535	652 - 681	6.3e-06	PPR repeat
PPR_2	PF13041	652 - 696	1.4e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0020965)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07290
malus_domestica	MD10G1157300.v1.1
prunus_persica	Prupe.8G196100_v2.0.a1 Prupe.8G196100_v2.0.a1
pyrus_communis	pycom10g13580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	366
AccBSI	CCGCTC	1 cut(s)	2476
AccII	CGCG	2 cut(s)	1490, 2482
AccIII	TCCGGA	2 cut(s)	347, 2405
AciI	CCGC	7 cut(s)	122, 639, 1167, 1440, 2217, 2476, 2482
AclWI	GGATC	3 cut(s)	1801, 1814, 2153
AcsI	RAATTY	1 cut(s)	1623
AcuI	CTGAAG	1 cut(s)	1786
AcyI	GRCGYC	1 cut(s)	49
AdeI	CACNNNGTG	1 cut(s)	2373
AfaI	GTAC	6 cut(s)	25, 907, 1268, 1543, 2128, 2295
AfiI	CCNNNNNNNGG	2 cut(s)	159, 160
AflIII	ACRYGT	1 cut(s)	902
AjnI	CCWGG	1 cut(s)	1599
AjuI	GAANNNNNNNTTGG	4 cut(s)	199, 231, 840, 872
AloI	GAACNNNNNNTCC	2 cut(s)	1146, 1178
Alw21I	GWGCWC	3 cut(s)	790, 1281, 2011
Alw26I	GTCTC	6 cut(s)	88, 196, 835, 1038, 1598, 2561
Alw44I	GTGCAC	2 cut(s)	786, 1277
AlwI	GGATC	3 cut(s)	1801, 1814, 2153
Ama87I	CYCGRG	2 cut(s)	2297, 2416
Aor13HI	TCCGGA	2 cut(s)	347, 2405
AoxI	GGCC	4 cut(s)	859, 1306, 1363, 2322
ApaLI	GTGCAC	2 cut(s)	786, 1277
ApeKI	GCWGC	2 cut(s)	4, 2352
ApoI	RAATTY	1 cut(s)	1623
AspLEI	GCGC	3 cut(s)	367, 1490, 2482
AsuHPI	GGTGA	8 cut(s)	890, 1305, 1429, 1756, 1796, 1935, 1984, 2591
AsuNHI	GCTAGC	1 cut(s)	1484
AvaI	CYCGRG	2 cut(s)	2297, 2416
BaeGI	GKGCMC	2 cut(s)	790, 1281
BamHI	GGATCC	1 cut(s)	1806
BarI	GAAGNNNNNNTAC	4 cut(s)	2053, 2085, 2484, 2516
BbsI	GAAGAC	1 cut(s)	96
Bbv12I	GWGCWC	3 cut(s)	790, 1281, 2011
BbvI	GCAGC	1 cut(s)	2364
BccI	CCATC	6 cut(s)	1025, 1078, 1145, 1340, 1550, 1760
BceAI	ACGGC	2 cut(s)	708, 1392
BciT130I	CCWGG	1 cut(s)	1601
BciVI	GTATCC	1 cut(s)	620
BclI	TGATCA	2 cut(s)	387, 2608
BcoDI	GTCTC	6 cut(s)	88, 196, 835, 1038, 1598, 2561
BfaI	CTAG	9 cut(s)	188, 987, 1107, 1485, 1526, 1811, 2000, 2282, 2438
BfmI	CTRYAG	1 cut(s)	2620
BfuI	GTATCC	1 cut(s)	620
BglII	AGATCT	1 cut(s)	33
BisI	GCNGC	4 cut(s)	5, 123, 639, 2353
BlsI	GCNGC	4 cut(s)	6, 124, 640, 2354
BmcAI	AGTACT	1 cut(s)	25
Bme1390I	CCNGG	1 cut(s)	1601
BmeT110I	CYCGRG	2 cut(s)	2297, 2416
BmiI	GGNNCC	3 cut(s)	467, 1798, 1808
BmrFI	CCNGG	1 cut(s)	1601
BmrI	ACTGGG	1 cut(s)	722
BmsI	GCATC	5 cut(s)	146, 395, 733, 1494, 2458
BmtI	GCTAGC	1 cut(s)	1488
BmuI	ACTGGG	1 cut(s)	722
BpiI	GAAGAC	1 cut(s)	96
BplI	GAGNNNNNCTC	2 cut(s)	732, 764
BpmI	CTGGAG	1 cut(s)	1622
Bpu10I	CCTNAGC	1 cut(s)	508
BpuEI	CTTGAG	2 cut(s)	734, 2336
Bsa29I	ATCGAT	2 cut(s)	1344, 1554
BsaAI	YACGTR	2 cut(s)	541, 905
BsaBI	GATNNNNATC	1 cut(s)	14
BsaHI	GRCGYC	1 cut(s)	49
BsaJI	CCNNGG	3 cut(s)	108, 724, 2325
BsaWI	WCCGGW	3 cut(s)	347, 468, 2405
Bsc4I	CCNNNNNNNGG	2 cut(s)	159, 160
Bse1I	ACTGG	3 cut(s)	717, 1798, 2581
Bse3DI	GCAATG	2 cut(s)	1707, 2034
Bse8I	GATNNNNATC	1 cut(s)	14
BseAI	TCCGGA	2 cut(s)	347, 2405
BseBI	CCWGG	1 cut(s)	1601
BseCI	ATCGAT	2 cut(s)	1344, 1554
BseDI	CCNNGG	3 cut(s)	108, 724, 2325
BseGI	GGATG	1 cut(s)	2272
BseJI	GATNNNNATC	1 cut(s)	14
BseLI	CCNNNNNNNGG	2 cut(s)	159, 160
BseMI	GCAATG	2 cut(s)	1707, 2034
BseMII	CTCAG	5 cut(s)	326, 440, 633, 751, 1681
BseNI	ACTGG	3 cut(s)	717, 1798, 2581
BseRI	GAGGAG	1 cut(s)	1626
BseSI	GKGCMC	2 cut(s)	790, 1281
BseXI	GCAGC	1 cut(s)	2364
Bsh1236I	CGCG	2 cut(s)	1490, 2482
BshFI	GGCC	4 cut(s)	861, 1308, 1365, 2324
BshVI	ATCGAT	2 cut(s)	1344, 1554
BsiHKAI	GWGCWC	3 cut(s)	790, 1281, 2011
BsiHKCI	CYCGRG	2 cut(s)	2297, 2416
BsiSI	CCGG	3 cut(s)	348, 469, 2406
BslFI	GGGAC	1 cut(s)	2399
BslI	CCNNNNNNNGG	2 cut(s)	159, 160
BsmAI	GTCTC	6 cut(s)	88, 196, 835, 1038, 1598, 2561
BsmBI	CGTCTC	2 cut(s)	88, 1038
BsmFI	GGGAC	1 cut(s)	2399
BsmI	GAATGC	2 cut(s)	286, 1299
BsnI	GGCC	4 cut(s)	861, 1308, 1365, 2324
BsoBI	CYCGRG	2 cut(s)	2297, 2416
Bsp1286I	GDGCHC	3 cut(s)	790, 1281, 2011
Bsp13I	TCCGGA	2 cut(s)	347, 2405
Bsp143I	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
Bsp19I	CCATGG	1 cut(s)	2325
BspACI	CCGC	7 cut(s)	122, 639, 1167, 1440, 2217, 2476, 2482
BspANI	GGCC	4 cut(s)	861, 1308, 1365, 2324
BspCNI	CTCAG	5 cut(s)	325, 441, 634, 750, 1680
BspDI	ATCGAT	2 cut(s)	1344, 1554
BspEI	TCCGGA	2 cut(s)	347, 2405
BspFNI	CGCG	2 cut(s)	1490, 2482
BspHI	TCATGA	1 cut(s)	127
BspLI	GGNNCC	3 cut(s)	467, 1798, 1808
BspMAI	CTGCAG	1 cut(s)	2624
BspOI	GCTAGC	1 cut(s)	1488
BspPI	GGATC	3 cut(s)	1801, 1814, 2153
BsrBI	CCGCTC	1 cut(s)	2476
BsrDI	GCAATG	2 cut(s)	1707, 2034
BsrI	ACTGG	3 cut(s)	717, 1798, 2581
BssECI	CCNNGG	3 cut(s)	108, 724, 2325
BssMI	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
BssNI	GRCGYC	1 cut(s)	49
BssT1I	CCWWGG	1 cut(s)	2325
Bst2UI	CCWGG	1 cut(s)	1601
Bst6I	CTCTTC	6 cut(s)	91, 1053, 1190, 1283, 1885, 2115
BstACI	GRCGYC	1 cut(s)	49
BstBAI	YACGTR	2 cut(s)	541, 905
BstC8I	GCNNGC	5 cut(s)	284, 369, 1204, 1486, 2478
BstDSI	CCRYGG	2 cut(s)	724, 2325
BstF5I	GGATG	1 cut(s)	2272
BstFNI	CGCG	2 cut(s)	1490, 2482
BstHHI	GCGC	3 cut(s)	367, 1490, 2482
BstKTI	GATC	9 cut(s)	36, 390, 871, 1344, 1781, 1809, 2161, 2281, 2611
BstMAI	GTCTC	6 cut(s)	88, 196, 835, 1038, 1598, 2561
BstMBI	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
BstMWI	GCNNNNNNNGC	3 cut(s)	897, 1481, 2477
BstNI	CCWGG	1 cut(s)	1601
BstNSI	RCATGY	1 cut(s)	371
BstSCI	CCNGG	1 cut(s)	1599
BstSFI	CTRYAG	1 cut(s)	2620
BstSLI	GKGCMC	2 cut(s)	790, 1281
BstUI	CGCG	2 cut(s)	1490, 2482
BstV1I	GCAGC	1 cut(s)	2364
BstV2I	GAAGAC	1 cut(s)	96
BstX2I	RGATCY	2 cut(s)	33, 1806
BstXI	CCANNNNNNTGG	1 cut(s)	2377
BstYI	RGATCY	2 cut(s)	33, 1806
Bsu15I	ATCGAT	2 cut(s)	1344, 1554
BsuI	GTATCC	1 cut(s)	620
BsuRI	GGCC	4 cut(s)	861, 1308, 1365, 2324
BsuTUI	ATCGAT	2 cut(s)	1344, 1554
BtgI	CCRYGG	2 cut(s)	724, 2325
BtsCI	GGATG	1 cut(s)	2272
BtsI	GCAGTG	3 cut(s)	247, 2593, 2617
BtsIMutI	CAGTG	4 cut(s)	247, 1017, 2593, 2617
Cac8I	GCNNGC	5 cut(s)	284, 369, 1204, 1486, 2478
CciI	TCATGA	1 cut(s)	127
CfoI	GCGC	3 cut(s)	367, 1490, 2482
ClaI	ATCGAT	2 cut(s)	1344, 1554
CseI	GACGC	2 cut(s)	38, 1595
Csp6I	GTAC	6 cut(s)	24, 906, 1267, 1542, 2127, 2294
CviAII	CATG	9 cut(s)	53, 128, 199, 271, 368, 652, 1952, 2326, 2560
CviQI	GTAC	6 cut(s)	24, 906, 1267, 1542, 2127, 2294
DpnI	GATC	9 cut(s)	35, 389, 870, 1343, 1780, 1808, 2160, 2280, 2610
DpnII	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
DraIII	CACNNNGTG	1 cut(s)	2373
Eam1104I	CTCTTC	6 cut(s)	91, 1053, 1190, 1283, 1885, 2115
EarI	CTCTTC	6 cut(s)	91, 1053, 1190, 1283, 1885, 2115
Eco130I	CCWWGG	1 cut(s)	2325
Eco57I	CTGAAG	1 cut(s)	1786
Eco88I	CYCGRG	2 cut(s)	2297, 2416
EcoRII	CCWGG	1 cut(s)	1599
EcoT14I	CCWWGG	1 cut(s)	2325
ErhI	CCWWGG	1 cut(s)	2325
Esp3I	CGTCTC	2 cut(s)	88, 1038
FaeI	CATG	9 cut(s)	56, 131, 202, 274, 371, 655, 1955, 2329, 2563
FaqI	GGGAC	1 cut(s)	2399
FatI	CATG	9 cut(s)	52, 127, 198, 270, 367, 651, 1951, 2325, 2559
FauI	CCCGC	4 cut(s)	1174, 2210, 2469, 2475
FauNDI	CATATG	1 cut(s)	1368
FbaI	TGATCA	2 cut(s)	387, 2608
Fnu4HI	GCNGC	4 cut(s)	5, 123, 639, 2353
FokI	GGATG	1 cut(s)	2279
Fsp4HI	GCNGC	4 cut(s)	5, 123, 639, 2353
FspBI	CTAG	9 cut(s)	188, 987, 1107, 1485, 1526, 1811, 2000, 2282, 2438
FspI	TGCGCA	1 cut(s)	366
GlaI	GCGC	3 cut(s)	366, 1489, 2481
GluI	GCNGC	4 cut(s)	5, 123, 639, 2353
GsuI	CTGGAG	1 cut(s)	1622
HaeIII	GGCC	4 cut(s)	861, 1308, 1365, 2324
HapII	CCGG	3 cut(s)	348, 469, 2406
HgaI	GACGC	2 cut(s)	38, 1595
HhaI	GCGC	3 cut(s)	367, 1490, 2482
Hin1I	GRCGYC	1 cut(s)	49
Hin1II	CATG	9 cut(s)	56, 131, 202, 274, 371, 655, 1955, 2329, 2563
Hin6I	GCGC	3 cut(s)	365, 1488, 2480
HinP1I	GCGC	3 cut(s)	365, 1488, 2480
HincII	GTYRAC	2 cut(s)	1987, 2541
HindII	GTYRAC	2 cut(s)	1987, 2541
HindIII	AAGCTT	3 cut(s)	957, 1721, 1910
HpaII	CCGG	3 cut(s)	348, 469, 2406
HphI	GGTGA	8 cut(s)	890, 1305, 1429, 1756, 1796, 1935, 1984, 2591
Hpy166II	GTNNAC	6 cut(s)	788, 998, 1009, 1279, 1987, 2541
Hpy188I	TCNGA	6 cut(s)	20, 112, 315, 740, 2119, 2137
Hpy8I	GTNNAC	6 cut(s)	788, 998, 1009, 1279, 1987, 2541
Hpy99I	CGWCG	1 cut(s)	295
HpyCH4IV	ACGT	4 cut(s)	540, 904, 1005, 1479
HpyF10VI	GCNNNNNNNGC	3 cut(s)	897, 1481, 2477
HpySE526I	ACGT	4 cut(s)	540, 904, 1005, 1479
Hsp92I	GRCGYC	1 cut(s)	49
Hsp92II	CATG	9 cut(s)	56, 131, 202, 274, 371, 655, 1955, 2329, 2563
HspAI	GCGC	3 cut(s)	365, 1488, 2480
Kpn2I	TCCGGA	2 cut(s)	347, 2405
Ksp22I	TGATCA	2 cut(s)	387, 2608
Kzo9I	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
LmnI	GCTCC	3 cut(s)	2380, 2485, 2497
Lsp1109I	GCAGC	1 cut(s)	2364
LweI	GCATC	5 cut(s)	146, 395, 733, 1494, 2458
MaeI	CTAG	9 cut(s)	188, 987, 1107, 1485, 1526, 1811, 2000, 2282, 2438
MaeII	ACGT	4 cut(s)	540, 904, 1005, 1479
MalI	GATC	9 cut(s)	35, 389, 870, 1343, 1780, 1808, 2160, 2280, 2610
MbiI	CCGCTC	1 cut(s)	2476
MboI	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
MfeI	CAATTG	2 cut(s)	157, 2612
MflI	RGATCY	2 cut(s)	33, 1806
MhlI	GDGCHC	3 cut(s)	790, 1281, 2011
MluCI	AATT	8 cut(s)	157, 475, 669, 1623, 1694, 1883, 2113, 2612
MlyI	GAGTC	3 cut(s)	1263, 1902, 2279
MmeI	TCCRAC	1 cut(s)	2298
MroI	TCCGGA	2 cut(s)	347, 2405
MseI	TTAA	9 cut(s)	180, 473, 666, 924, 963, 1089, 1227, 1614, 1826
MslI	CAYNNNNRTG	3 cut(s)	2186, 2245, 2336
MspA1I	CMGCKG	2 cut(s)	641, 2217
MspI	CCGG	3 cut(s)	348, 469, 2406
MspR9I	CCNGG	1 cut(s)	1601
MunI	CAATTG	2 cut(s)	157, 2612
Mva1269I	GAATGC	2 cut(s)	286, 1299
MvaI	CCWGG	1 cut(s)	1601
MvnI	CGCG	2 cut(s)	1490, 2482
MwoI	GCNNNNNNNGC	3 cut(s)	897, 1481, 2477
NcoI	CCATGG	1 cut(s)	2325
NdeI	CATATG	1 cut(s)	1368
NdeII	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
NheI	GCTAGC	1 cut(s)	1484
NlaIII	CATG	9 cut(s)	56, 131, 202, 274, 371, 655, 1955, 2329, 2563
NlaIV	GGNNCC	3 cut(s)	467, 1798, 1808
NmuCI	GTSAC	7 cut(s)	242, 541, 1311, 1583, 1744, 1954, 2236
NsbI	TGCGCA	1 cut(s)	366
NspI	RCATGY	1 cut(s)	371
PaeI	GCATGC	1 cut(s)	371
PaeR7I	CTCGAG	1 cut(s)	2297
PagI	TCATGA	1 cut(s)	127
PcsI	WCGNNNNNNNCGW	1 cut(s)	255
PctI	GAATGC	2 cut(s)	286, 1299
PfoI	TCCNGGA	1 cut(s)	1599
PkrI	GCNGC	4 cut(s)	6, 124, 640, 2354
PleI	GAGTC	3 cut(s)	1262, 1901, 2278
PpsI	GAGTC	3 cut(s)	1262, 1901, 2278
Ppu21I	YACGTR	2 cut(s)	541, 905
Psp6I	CCWGG	1 cut(s)	1599
PspGI	CCWGG	1 cut(s)	1599
PspN4I	GGNNCC	3 cut(s)	467, 1798, 1808
PstI	CTGCAG	1 cut(s)	2624
PsuI	RGATCY	2 cut(s)	33, 1806
RsaI	GTAC	6 cut(s)	25, 907, 1268, 1543, 2128, 2295
RsaNI	GTAC	6 cut(s)	24, 906, 1267, 1542, 2127, 2294
RseI	CAYNNNNRTG	3 cut(s)	2186, 2245, 2336
SaqAI	TTAA	9 cut(s)	180, 473, 666, 924, 963, 1089, 1227, 1614, 1826
SatI	GCNGC	4 cut(s)	5, 123, 639, 2353
Sau3AI	GATC	9 cut(s)	33, 387, 868, 1341, 1778, 1806, 2158, 2278, 2608
ScaI	AGTACT	1 cut(s)	25
SchI	GAGTC	3 cut(s)	1263, 1902, 2279
ScrFI	CCNGG	1 cut(s)	1601
SduI	GDGCHC	3 cut(s)	790, 1281, 2011
SfaNI	GCATC	5 cut(s)	146, 395, 733, 1494, 2458
SfcI	CTRYAG	1 cut(s)	2620
Sfr274I	CTCGAG	1 cut(s)	2297
SlaI	CTCGAG	1 cut(s)	2297
SmiMI	CAYNNNNRTG	3 cut(s)	2186, 2245, 2336
SmlI	CTYRAG	3 cut(s)	749, 2297, 2315
SmoI	CTYRAG	3 cut(s)	749, 2297, 2315
SphI	GCATGC	1 cut(s)	371
Sse9I	AATT	8 cut(s)	157, 475, 669, 1623, 1694, 1883, 2113, 2612
SsiI	CCGC	7 cut(s)	122, 639, 1167, 1440, 2217, 2476, 2482
SspMI	CTAG	9 cut(s)	188, 987, 1107, 1485, 1526, 1811, 2000, 2282, 2438
StyD4I	CCNGG	1 cut(s)	1599
StyI	CCWWGG	1 cut(s)	2325
TaiI	ACGT	4 cut(s)	543, 907, 1008, 1482
TasI	AATT	8 cut(s)	157, 475, 669, 1623, 1694, 1883, 2113, 2612
TatI	WGTACW	3 cut(s)	23, 2126, 2293
TauI	GCSGC	2 cut(s)	125, 641
Tru1I	TTAA	9 cut(s)	180, 473, 666, 924, 963, 1089, 1227, 1614, 1826
Tru9I	TTAA	9 cut(s)	180, 473, 666, 924, 963, 1089, 1227, 1614, 1826
TscAI	CASTG	4 cut(s)	247, 1024, 2593, 2624
TseFI	GTSAC	7 cut(s)	242, 541, 1311, 1583, 1744, 1954, 2236
TseI	GCWGC	2 cut(s)	4, 2352
Tsp45I	GTSAC	7 cut(s)	242, 541, 1311, 1583, 1744, 1954, 2236
TspGWI	ACGGA	5 cut(s)	70, 582, 647, 1062, 2279
TspRI	CASTG	4 cut(s)	247, 1024, 2593, 2624
VneI	GTGCAC	2 cut(s)	786, 1277
XapI	RAATTY	1 cut(s)	1623
XceI	RCATGY	1 cut(s)	371
XhoI	CTCGAG	1 cut(s)	2297
XspI	CTAG	9 cut(s)	188, 987, 1107, 1485, 1526, 1811, 2000, 2282, 2438
ZrmI	AGTACT	1 cut(s)	25

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.