Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0020157

Physical Location & Seq

Genomic Coordinates Reverse (-)

4458389 .. 4461844

Gene Structure 3456 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT3G13640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGTCAGATCGATTGACGCGGATTGCTATCGTGAGTGAAGACCGGTGCAAGCCTAAGAAATGTCGCCAGGAGTGCAAGAAGAGTTGTCCTGTTGTCAAGACTGGGAAACTTTGTATCGAGGTTGGTTCTACTTCCAAGAGTGCTTTCATATCAGAGGAGCTGTGTATCGGATGTGGTATATGTGTTAAGAAATGCCCGTTTGAAGCTATTCAGATTATCAATCTTCCTAAGGACTTAGCCAAAGATACAACCCATCGATATGGGGCTAATGGTTTTAAGTTGCACAGGCTTCCAATTCCACGGCCGGGGCAAGTCCTTGGGTTGGTTGGAACAAATGGTATTGGAAAATCTACTGCTCTCAAAATCTTGGCTGGAAAACTCAAACCAAATCTTGGCAGATTTAATACTCCTCCTGACTGGGAAGAAATTTTGACTCACTTCCGCGGGTCAGAACTTCAAAGCTATTTCATCCGAGTAGTAGAGGAAAATCTAAAGACTGCTATAAAGCCACAACATGTTGACTACATAAAAGAAGTTGTTCGTGGTAATCTTGGGAAGATGCTTGAGAAGCTGGACGAGAGAGGACTGATGGAAGAGATTTGTGCTGATATGGAGTTGAACCAGGTCCTGGAGCGTGAAGCAAGACAAGTATCTGGTGGAGAGCTGCAGAGGTTTGCCATTGCCGCAGTTTTCGTGAAGAAGGCTGATATATACATGTTTGATGAACCATCTAGTTACCTCGATGTGAGGCAGAGACTCAAGGCTGCTCAAGTTATACGATCACTCCTCAGGCATGACAGCTACGTAATTGTTGTGGAGCACGACCTCAGCGTCCTTGACTATCTCTCGGATTTCGTTTGCTGTTTGTATGGGAAACCAGGAGCATATGGTGTCGTGACTCTCCCCTTTTCTGTCAGAGAAGGAATCAACGTGTTCTTGGCTGGATTTATCCCCACAGAAAACTTGCGTTTTAGGGATGAATCCCTGACCTTCAGGGTTTCTGAGACTACACAAGAGAATGATGGGGAAGTGAAGTCCTATGCAAGATACAAATACCCAAATATGACTAAGCAACTTGGAGATTTCAAGCTGGAAGTGATGGAAGGGGAGTTCACAGACTCTCAGATTATCGTAATGCTTGGAGAGAATGGTACAGGGAAAACGACCTTCATCCGGATGCTGGCAGGCGCATTCCCACGTGAAGAGGGTGTACAATCGGAGATTCCAGAGTTTAATGTGTCGTACAAACCGCAAGGGAATGATTCGAAGCGCGAGTGTACAGTGAGACAGTTGCTACATGACAAGATTCGTGATGCATGCGCACATCCTCAGTTTATGTCAGATGTAATAAGACCGCTTCAGATTGAGCAGTTGATGGACCAAGTGGTAAAAACTCTGTCTGGTGGAGAGAAGCAGAGGGTTGCCATTACTCTATGCCTTGGGAAGCCTGCTGATATCTATCTGATTGACGAGCCAAGTGCGCATTTGGACTCAGAGCAGCGGATCACAGCTTCAAAGGTCATAAAACGGTTCATCCTGCACGCAAAGAAAACCGCGTTTATTGTGGAGCATGACTTCATAATGGCAACCTATCTTGCGGACCGAGTCATTGTGTACGAAGGACAGCCAGCTGTCAAGTGTATTGCTCATTCTCCACAGTCGCTGCTCAGTGGAATGAACCACTTCCTATCGCACTTGAACATCACATTCAGACGGGATCCGACTAACTTCAGGCCAAGGATAAACAAACTAGAGTCCATCAAGGACAAGGAGCAAAAGACTGCAGGATCATACTACTACTTAGACGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000054 GO:0000166 GO:0003674 GO:0005215 GO:0005488 GO:0005506 GO:0005524 GO:0006403 GO:0006405 GO:0006412 GO:0006413 GO:0006415 GO:0006518 GO:0006611 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0015931 GO:0016043 GO:0017076 GO:0019538 GO:0022411 GO:0022613 GO:0030554 GO:0031503 GO:0032553 GO:0032555 GO:0032559 GO:0032984 GO:0033036 GO:0033750 GO:0034613 GO:0034641 GO:0034645 GO:0035639 GO:0036094 GO:0042254 GO:0042886 GO:0043021 GO:0043024 GO:0043043 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043603 GO:0043604 GO:0043624 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044877 GO:0045184 GO:0046872 GO:0046907 GO:0046914 GO:0050657 GO:0050658 GO:0051168 GO:0051169 GO:0051179 GO:0051234 GO:0051236 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0070727 GO:0071166 GO:0071426 GO:0071428 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ABC_tran Fer4 RLI

Protein Analysis

603

Amino Acids

68.16

Weight (kDa)

8.43

Isoelectric Point (pI)

34.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Fer4_RLI	PF04068	6 - 36	9.6e-14	Possible Fer4-like domain in RNase L inhibitor, RLI
Fer4	PF00037	49 - 71	2.1e-08	4Fe-4S binding domain
Fer4_6	PF12837	50 - 70	9.7e-06	4Fe-4S binding domain
ABC_tran	PF00005	102 - 244	4.3e-19	ABC transporter
ABC_tran	PF00005	368 - 493	1.4e-17	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0020157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13640 AT4G30300
malus_domestica	MD09G1160000.v1.1
prunus_persica	Prupe.3G017900_v2.0.a1 Prupe.3G018700_v2.0.a1 Prupe.3G018700_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	830
Acc16I	TGCGCA	2 cut(s)	1321, 1482
AccB7I	CCANNNNNTGG	2 cut(s)	392, 628
AccII	CGCG	4 cut(s)	19, 444, 1272, 1556
AccIII	TCCGGA	1 cut(s)	1173
AciI	CCGC	9 cut(s)	19, 442, 444, 684, 1250, 1355, 1501, 1554, 1598
AclWI	GGATC	4 cut(s)	1511, 1712, 1725, 1795
AcoI	YGGCCR	1 cut(s)	302
AcsI	RAATTY	1 cut(s)	426
AcuI	CTGAAG	3 cut(s)	976, 1343, 1714
AcvI	CACGTG	1 cut(s)	1199
AfaI	GTAC	5 cut(s)	1153, 1212, 1244, 1279, 1616
AfiI	CCNNNNNNNGG	6 cut(s)	305, 322, 392, 628, 1173, 1180
AflIII	ACRYGT	3 cut(s)	514, 714, 930
AgeI	ACCGGT	1 cut(s)	42
AgsI	TTSAA	6 cut(s)	203, 458, 619, 1087, 1515, 1699
AjnI	CCWGG	4 cut(s)	66, 621, 627, 877
AjuI	GAANNNNNNNTTGG	2 cut(s)	128, 160
AloI	GAACNNNNNNTCC	2 cut(s)	1094, 1126
AluBI	AGCT	9 cut(s)	160, 206, 462, 571, 664, 801, 1090, 1511, 1631
AluI	AGCT	9 cut(s)	160, 206, 462, 571, 664, 801, 1090, 1511, 1631
Alw21I	GWGCWC	1 cut(s)	822
Alw26I	GTCTC	3 cut(s)	748, 998, 1279
AlwI	GGATC	4 cut(s)	1511, 1712, 1725, 1795
AlwNI	CAGNNNCTG	2 cut(s)	628, 1663
Aor13HI	TCCGGA	1 cut(s)	1173
AoxI	GGCC	2 cut(s)	302, 1733
ApeKI	GCWGC	4 cut(s)	664, 764, 1498, 1663
ApoI	RAATTY	1 cut(s)	426
AsiGI	ACCGGT	1 cut(s)	42
Asp700I	GAANNNNTTC	3 cut(s)	207, 537, 1682
AspLEI	GCGC	4 cut(s)	1190, 1272, 1322, 1483
AspS9I	GGNCC	3 cut(s)	625, 1378, 1600
AsuC2I	CCSGG	1 cut(s)	306
AsuII	TTCGAA	1 cut(s)	1265
AvaII	GGWCC	3 cut(s)	625, 1378, 1600
AxyI	CCTNAGG	2 cut(s)	228, 788
BamHI	GGATCC	1 cut(s)	1717
BarI	GAAGNNNNNNTAC	2 cut(s)	1194, 1226
BbrPI	CACGTG	1 cut(s)	1199
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	1 cut(s)	822
BbvCI	CCTCAGC	1 cut(s)	827
BbvI	GCAGC	4 cut(s)	651, 751, 1510, 1650
BccI	CCATC	7 cut(s)	261, 583, 736, 1016, 1093, 1369, 1766
BceAI	ACGGC	1 cut(s)	317
BcgI	CGANNNNNNTGC	2 cut(s)	1460, 1494
BciT130I	CCWGG	4 cut(s)	68, 623, 629, 879
BcnI	CCSGG	1 cut(s)	306
BcoDI	GTCTC	3 cut(s)	748, 998, 1279
BfaI	CTAG	2 cut(s)	732, 1751
BfmI	CTRYAG	2 cut(s)	665, 1782
BisI	GCNGC	5 cut(s)	665, 684, 765, 1499, 1664
BlsI	GCNGC	5 cut(s)	666, 685, 766, 1500, 1665
Bme1390I	CCNGG	5 cut(s)	68, 306, 623, 629, 879
Bme18I	GGWCC	3 cut(s)	625, 1378, 1600
BmgT120I	GGNCC	3 cut(s)	625, 1378, 1600
BmiI	GGNNCC	1 cut(s)	1719
BmrFI	CCNGG	5 cut(s)	68, 306, 623, 629, 879
BmrI	ACTGGG	2 cut(s)	111, 427
BmsI	GCATC	3 cut(s)	549, 1167, 1303
BmuI	ACTGGG	2 cut(s)	111, 427
BpiI	GAAGAC	1 cut(s)	45
BpmI	CTGGAG	1 cut(s)	650
Bpu10I	CCTNAGC	1 cut(s)	827
Bpu14I	TTCGAA	1 cut(s)	1265
BpuEI	CTTGAG	3 cut(s)	584, 743, 753
BpuMI	CCSGG	1 cut(s)	306
Bsa29I	ATCGAT	2 cut(s)	10, 256
BsaAI	YACGTR	2 cut(s)	805, 1199
BsaBI	GATNNNNATC	2 cut(s)	26, 1458
BsaJI	CCNNGG	6 cut(s)	299, 305, 316, 442, 1438, 1736
BsaWI	WCCGGW	2 cut(s)	42, 1173
BsaXI	ACNNNNNCTCC	2 cut(s)	768, 798
Bsc4I	CCNNNNNNNGG	6 cut(s)	305, 322, 392, 628, 1173, 1180
Bse118I	RCCGGY	1 cut(s)	42
Bse1I	ACTGG	2 cut(s)	106, 422
Bse21I	CCTNAGG	2 cut(s)	228, 788
Bse3DI	GCAATG	1 cut(s)	678
Bse8I	GATNNNNATC	2 cut(s)	26, 1458
BseAI	TCCGGA	1 cut(s)	1173
BseBI	CCWGG	4 cut(s)	68, 623, 629, 879
BseCI	ATCGAT	2 cut(s)	10, 256
BseDI	CCNNGG	6 cut(s)	299, 305, 316, 442, 1438, 1736
BseGI	GGATG	7 cut(s)	176, 468, 982, 1170, 1182, 1324, 1533
BseJI	GATNNNNATC	2 cut(s)	26, 1458
BseLI	CCNNNNNNNGG	6 cut(s)	305, 322, 392, 628, 1173, 1180
BseMI	GCAATG	1 cut(s)	678
BseMII	CTCAG	7 cut(s)	802, 841, 993, 1136, 1343, 1506, 1681
BseNI	ACTGG	2 cut(s)	106, 422
BseRI	GAGGAG	3 cut(s)	170, 399, 776
BseX3I	CGGCCG	1 cut(s)	302
BseXI	GCAGC	4 cut(s)	651, 751, 1510, 1650
BsgI	GTGCAG	1 cut(s)	1523
Bsh1236I	CGCG	4 cut(s)	19, 444, 1272, 1556
Bsh1285I	CGRYCG	1 cut(s)	305
BshFI	GGCC	2 cut(s)	304, 1735
BshTI	ACCGGT	1 cut(s)	42
BshVI	ATCGAT	2 cut(s)	10, 256
BsiEI	CGRYCG	1 cut(s)	305
BsiHKAI	GWGCWC	1 cut(s)	822
BsiSI	CCGG	3 cut(s)	43, 305, 1174
BslI	CCNNNNNNNGG	6 cut(s)	305, 322, 392, 628, 1173, 1180
BsmAI	GTCTC	3 cut(s)	748, 998, 1279
BsmI	GAATGC	1 cut(s)	1190
BsnI	GGCC	2 cut(s)	304, 1735
Bsp119I	TTCGAA	1 cut(s)	1265
Bsp1286I	GDGCHC	1 cut(s)	822
Bsp13I	TCCGGA	1 cut(s)	1173
Bsp1407I	TGTACA	2 cut(s)	1210, 1277
Bsp143I	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
BspACI	CCGC	9 cut(s)	19, 442, 444, 684, 1250, 1355, 1501, 1554, 1598
BspANI	GGCC	2 cut(s)	304, 1735
BspCNI	CTCAG	7 cut(s)	801, 840, 994, 1135, 1342, 1505, 1680
BspDI	ATCGAT	2 cut(s)	10, 256
BspEI	TCCGGA	1 cut(s)	1173
BspFNI	CGCG	4 cut(s)	19, 444, 1272, 1556
BspLI	GGNNCC	1 cut(s)	1719
BspMAI	CTGCAG	2 cut(s)	669, 1786
BspPI	GGATC	4 cut(s)	1511, 1712, 1725, 1795
BspT104I	TTCGAA	1 cut(s)	1265
BsrDI	GCAATG	1 cut(s)	678
BsrFI	RCCGGY	1 cut(s)	42
BsrGI	TGTACA	2 cut(s)	1210, 1277
BsrI	ACTGG	2 cut(s)	106, 422
BssAI	RCCGGY	1 cut(s)	42
BssECI	CCNNGG	6 cut(s)	299, 305, 316, 442, 1438, 1736
BssMI	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
BssT1I	CCWWGG	3 cut(s)	316, 1438, 1736
Bst2UI	CCWGG	4 cut(s)	68, 623, 629, 879
Bst4CI	ACNGT	4 cut(s)	1282, 1290, 1530, 1659
Bst6I	CTCTTC	3 cut(s)	74, 588, 1197
BstAUI	TGTACA	2 cut(s)	1210, 1277
BstBAI	YACGTR	2 cut(s)	805, 1199
BstBI	TTCGAA	1 cut(s)	1265
BstC8I	GCNNGC	7 cut(s)	50, 1182, 1186, 1318, 1449, 1542, 1629
BstDSI	CCRYGG	2 cut(s)	299, 442
BstF5I	GGATG	7 cut(s)	176, 468, 982, 1170, 1182, 1324, 1533
BstFNI	CGCG	4 cut(s)	19, 444, 1272, 1556
BstHHI	GCGC	4 cut(s)	1190, 1272, 1322, 1483
BstKTI	GATC	5 cut(s)	10, 782, 1506, 1720, 1790
BstMAI	GTCTC	3 cut(s)	748, 998, 1279
BstMBI	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
BstMCI	CGRYCG	1 cut(s)	305
BstMWI	GCNNNNNNNGC	4 cut(s)	72, 568, 683, 1480
BstNI	CCWGG	4 cut(s)	68, 623, 629, 879
BstNSI	RCATGY	3 cut(s)	518, 718, 1320
BstSCI	CCNGG	5 cut(s)	66, 304, 621, 627, 877
BstSFI	CTRYAG	2 cut(s)	665, 1782
BstSNI	TACGTA	1 cut(s)	805
BstUI	CGCG	4 cut(s)	19, 444, 1272, 1556
BstV1I	GCAGC	4 cut(s)	651, 751, 1510, 1650
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	1 cut(s)	1717
BstXI	CCANNNNNNTGG	1 cut(s)	260
BstYI	RGATCY	1 cut(s)	1717
BstZI	CGGCCG	1 cut(s)	302
Bsu15I	ATCGAT	2 cut(s)	10, 256
Bsu36I	CCTNAGG	2 cut(s)	228, 788
BsuRI	GGCC	2 cut(s)	304, 1735
BsuTUI	ATCGAT	2 cut(s)	10, 256
BtgI	CCRYGG	2 cut(s)	299, 442
BtsCI	GGATG	7 cut(s)	176, 468, 982, 1170, 1182, 1324, 1533
BtsIMutI	CAGTG	2 cut(s)	1287, 1675
Cac8I	GCNNGC	7 cut(s)	50, 1182, 1186, 1318, 1449, 1542, 1629
CaiI	CAGNNNCTG	2 cut(s)	628, 1663
CfoI	GCGC	4 cut(s)	1190, 1272, 1322, 1483
Cfr10I	RCCGGY	1 cut(s)	42
Cfr13I	GGNCC	3 cut(s)	625, 1378, 1600
Cfr42I	CCGCGG	1 cut(s)	445
ClaI	ATCGAT	2 cut(s)	10, 256
CpoI	CGGWCCG	1 cut(s)	1600
CseI	GACGC	2 cut(s)	25, 820
CsiI	ACCWGGT	1 cut(s)	621
Csp6I	GTAC	5 cut(s)	1152, 1211, 1243, 1278, 1615
CspAI	ACCGGT	1 cut(s)	42
CspI	CGGWCCG	1 cut(s)	1600
CviAII	CATG	6 cut(s)	515, 715, 794, 1298, 1317, 1571
CviQI	GTAC	5 cut(s)	1152, 1211, 1243, 1278, 1615
DpnI	GATC	5 cut(s)	9, 781, 1505, 1719, 1789
DpnII	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
DrdI	GACNNNNNNGTC	1 cut(s)	830
DseDI	GACNNNNNNGTC	1 cut(s)	830
EaeI	YGGCCR	1 cut(s)	302
EagI	CGGCCG	1 cut(s)	302
Eam1104I	CTCTTC	3 cut(s)	74, 588, 1197
EarI	CTCTTC	3 cut(s)	74, 588, 1197
EclXI	CGGCCG	1 cut(s)	302
Eco105I	TACGTA	1 cut(s)	805
Eco130I	CCWWGG	3 cut(s)	316, 1438, 1736
Eco32I	GATATC	1 cut(s)	1456
Eco47I	GGWCC	3 cut(s)	625, 1378, 1600
Eco52I	CGGCCG	1 cut(s)	302
Eco57I	CTGAAG	3 cut(s)	976, 1343, 1714
Eco72I	CACGTG	1 cut(s)	1199
Eco81I	CCTNAGG	2 cut(s)	228, 788
EcoO109I	RGGNCCY	1 cut(s)	625
EcoRII	CCWGG	4 cut(s)	66, 621, 627, 877
EcoRV	GATATC	1 cut(s)	1456
EcoT14I	CCWWGG	3 cut(s)	316, 1438, 1736
EcoT22I	ATGCAT	1 cut(s)	1318
ErhI	CCWWGG	3 cut(s)	316, 1438, 1736
FaeI	CATG	6 cut(s)	518, 718, 797, 1301, 1320, 1574
FatI	CATG	6 cut(s)	514, 714, 793, 1297, 1316, 1570
FauI	CCCGC	1 cut(s)	437
FauNDI	CATATG	1 cut(s)	886
Fnu4HI	GCNGC	5 cut(s)	665, 684, 765, 1499, 1664
FokI	GGATG	7 cut(s)	183, 455, 989, 1157, 1189, 1311, 1520
Fsp4HI	GCNGC	5 cut(s)	665, 684, 765, 1499, 1664
FspAI	RTGCGCAY	2 cut(s)	1321, 1482
FspBI	CTAG	2 cut(s)	732, 1751
FspI	TGCGCA	2 cut(s)	1321, 1482
GlaI	GCGC	4 cut(s)	1189, 1271, 1321, 1482
GluI	GCNGC	5 cut(s)	665, 684, 765, 1499, 1664
GsuI	CTGGAG	1 cut(s)	650
HaeIII	GGCC	2 cut(s)	304, 1735
HapII	CCGG	3 cut(s)	43, 305, 1174
HgaI	GACGC	2 cut(s)	25, 820
HhaI	GCGC	4 cut(s)	1190, 1272, 1322, 1483
Hin1II	CATG	6 cut(s)	518, 718, 797, 1301, 1320, 1574
Hin6I	GCGC	4 cut(s)	1188, 1270, 1320, 1481
HinP1I	GCGC	4 cut(s)	1188, 1270, 1320, 1481
HincII	GTYRAC	1 cut(s)	520
HindII	GTYRAC	1 cut(s)	520
HpaII	CCGG	3 cut(s)	43, 305, 1174
Hpy166II	GTNNAC	5 cut(s)	520, 1113, 1211, 1278, 1615
Hpy188III	TCNNGA	8 cut(s)	31, 97, 413, 694, 895, 1174, 1226, 1310
Hpy8I	GTNNAC	5 cut(s)	520, 1113, 1211, 1278, 1615
HpyAV	CCTTC	6 cut(s)	694, 914, 1000, 1097, 1177, 1613
HpyCH4III	ACNGT	4 cut(s)	1282, 1290, 1530, 1659
HpyCH4IV	ACGT	3 cut(s)	804, 930, 1198
HpyCH4V	TGCA	8 cut(s)	48, 75, 283, 667, 1043, 1316, 1540, 1784
HpyF10VI	GCNNNNNNNGC	4 cut(s)	72, 568, 683, 1480
HpySE526I	ACGT	3 cut(s)	804, 930, 1198
Hsp92II	CATG	6 cut(s)	518, 718, 797, 1301, 1320, 1574
HspAI	GCGC	4 cut(s)	1188, 1270, 1320, 1481
Kpn2I	TCCGGA	1 cut(s)	1173
KspI	CCGCGG	1 cut(s)	445
Kzo9I	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
LmnI	GCTCC	6 cut(s)	157, 631, 817, 881, 1567, 1771
Lsp1109I	GCAGC	4 cut(s)	651, 751, 1510, 1650
LweI	GCATC	3 cut(s)	549, 1167, 1303
MabI	ACCWGGT	1 cut(s)	621
MaeI	CTAG	2 cut(s)	732, 1751
MaeII	ACGT	3 cut(s)	804, 930, 1198
MaeIII	GTNAC	2 cut(s)	734, 895
MalI	GATC	5 cut(s)	9, 781, 1505, 1719, 1789
MboI	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
MboII	GAAGA	8 cut(s)	50, 91, 215, 434, 568, 605, 709, 1214
MflI	RGATCY	1 cut(s)	1717
MhlI	GDGCHC	1 cut(s)	822
MluCI	AATT	3 cut(s)	294, 426, 807
MlyI	GAGTC	7 cut(s)	427, 750, 892, 1112, 1484, 1614, 1763
MmeI	TCCRAC	2 cut(s)	307, 1745
Mph1103I	ATGCAT	1 cut(s)	1318
MroI	TCCGGA	1 cut(s)	1173
MroXI	GAANNNNTTC	3 cut(s)	207, 537, 1682
MseI	TTAA	4 cut(s)	186, 276, 402, 1233
MslI	CAYNNNNRTG	2 cut(s)	258, 1175
MspA1I	CMGCKG	3 cut(s)	444, 1501, 1631
MspI	CCGG	3 cut(s)	43, 305, 1174
MspR9I	CCNGG	5 cut(s)	68, 306, 623, 629, 879
Mva1269I	GAATGC	1 cut(s)	1190
MvaI	CCWGG	4 cut(s)	68, 623, 629, 879
MvnI	CGCG	4 cut(s)	19, 444, 1272, 1556
MwoI	GCNNNNNNNGC	4 cut(s)	72, 568, 683, 1480
NciI	CCSGG	1 cut(s)	306
NdeI	CATATG	1 cut(s)	886
NdeII	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
NlaIII	CATG	6 cut(s)	518, 718, 797, 1301, 1320, 1574
NlaIV	GGNNCC	1 cut(s)	1719
NmuCI	GTSAC	1 cut(s)	895
NsbI	TGCGCA	2 cut(s)	1321, 1482
NsiI	ATGCAT	1 cut(s)	1318
NspI	RCATGY	3 cut(s)	518, 718, 1320
NspV	TTCGAA	1 cut(s)	1265
PaeI	GCATGC	1 cut(s)	1320
PciI	ACATGT	2 cut(s)	514, 714
PcsI	WCGNNNNNNNCGW	1 cut(s)	828
PctI	GAATGC	1 cut(s)	1190
PdmI	GAANNNNTTC	3 cut(s)	207, 537, 1682
PfeI	GAWTC	5 cut(s)	924, 980, 1222, 1262, 1306
PflFI	GACNNNGTC	1 cut(s)	1604
PflMI	CCANNNNNTGG	2 cut(s)	392, 628
PfoI	TCCNGGA	1 cut(s)	627
PinAI	ACCGGT	1 cut(s)	42
PkrI	GCNGC	5 cut(s)	666, 685, 766, 1500, 1665
PleI	GAGTC	7 cut(s)	427, 750, 892, 1112, 1484, 1613, 1762
PmaCI	CACGTG	1 cut(s)	1199
PmlI	CACGTG	1 cut(s)	1199
PpsI	GAGTC	7 cut(s)	427, 750, 892, 1112, 1484, 1613, 1762
Ppu21I	YACGTR	2 cut(s)	805, 1199
PpuMI	RGGWCCY	1 cut(s)	625
PscI	ACATGT	2 cut(s)	514, 714
Psp5II	RGGWCCY	1 cut(s)	625
Psp6I	CCWGG	4 cut(s)	66, 621, 627, 877
PspCI	CACGTG	1 cut(s)	1199
PspGI	CCWGG	4 cut(s)	66, 621, 627, 877
PspN4I	GGNNCC	1 cut(s)	1719
PspPI	GGNCC	3 cut(s)	625, 1378, 1600
PspPPI	RGGWCCY	1 cut(s)	625
PstI	CTGCAG	2 cut(s)	669, 1786
PstNI	CAGNNNCTG	2 cut(s)	628, 1663
PsuI	RGATCY	1 cut(s)	1717
PsyI	GACNNNGTC	1 cut(s)	1604
PvuII	CAGCTG	1 cut(s)	1631
RsaI	GTAC	5 cut(s)	1153, 1212, 1244, 1279, 1616
RsaNI	GTAC	5 cut(s)	1152, 1211, 1243, 1278, 1615
RseI	CAYNNNNRTG	2 cut(s)	258, 1175
Rsr2I	CGGWCCG	1 cut(s)	1600
RsrII	CGGWCCG	1 cut(s)	1600
SacII	CCGCGG	1 cut(s)	445
SaqAI	TTAA	4 cut(s)	186, 276, 402, 1233
SatI	GCNGC	5 cut(s)	665, 684, 765, 1499, 1664
Sau3AI	GATC	5 cut(s)	7, 779, 1503, 1717, 1787
Sau96I	GGNCC	3 cut(s)	625, 1378, 1600
SchI	GAGTC	7 cut(s)	427, 750, 892, 1112, 1484, 1614, 1763
ScrFI	CCNGG	5 cut(s)	68, 306, 623, 629, 879
SduI	GDGCHC	1 cut(s)	822
SexAI	ACCWGGT	1 cut(s)	621
SfaNI	GCATC	3 cut(s)	549, 1167, 1303
SfcI	CTRYAG	2 cut(s)	665, 1782
Sfr303I	CCGCGG	1 cut(s)	445
SfuI	TTCGAA	1 cut(s)	1265
SgrBI	CCGCGG	1 cut(s)	445
SinI	GGWCC	3 cut(s)	625, 1378, 1600
SmiMI	CAYNNNNRTG	2 cut(s)	258, 1175
SmlI	CTYRAG	3 cut(s)	563, 758, 768
SmoI	CTYRAG	3 cut(s)	563, 758, 768
SnaBI	TACGTA	1 cut(s)	805
SphI	GCATGC	1 cut(s)	1320
Sse9I	AATT	3 cut(s)	294, 426, 807
SsiI	CCGC	9 cut(s)	19, 442, 444, 684, 1250, 1355, 1501, 1554, 1598
SspMI	CTAG	2 cut(s)	732, 1751
StyD4I	CCNGG	5 cut(s)	66, 304, 621, 627, 877
StyI	CCWWGG	3 cut(s)	316, 1438, 1736
TaaI	ACNGT	4 cut(s)	1282, 1290, 1530, 1659
TaiI	ACGT	3 cut(s)	807, 933, 1201
TaqI	TCGA	5 cut(s)	10, 117, 256, 741, 1265
TaqII	GACCGA	1 cut(s)	1617
TasI	AATT	3 cut(s)	294, 426, 807
TatI	WGTACW	2 cut(s)	1210, 1277
TauI	GCSGC	1 cut(s)	686
TfiI	GAWTC	5 cut(s)	924, 980, 1222, 1262, 1306
Tru1I	TTAA	4 cut(s)	186, 276, 402, 1233
Tru9I	TTAA	4 cut(s)	186, 276, 402, 1233
TscAI	CASTG	2 cut(s)	1287, 1675
TseFI	GTSAC	1 cut(s)	895
TseI	GCWGC	4 cut(s)	664, 764, 1498, 1663
Tsp45I	GTSAC	1 cut(s)	895
TspDTI	ATGAA	8 cut(s)	136, 457, 738, 993, 1159, 1522, 1567, 1691
TspRI	CASTG	2 cut(s)	1287, 1675
Tth111I	GACNNNGTC	1 cut(s)	1604
Van91I	CCANNNNNTGG	2 cut(s)	392, 628
VpaK11BI	GGWCC	3 cut(s)	625, 1378, 1600
XapI	RAATTY	1 cut(s)	426
XceI	RCATGY	3 cut(s)	518, 718, 1320
XmnI	GAANNNNTTC	3 cut(s)	207, 537, 1682
XspI	CTAG	2 cut(s)	732, 1751
Zsp2I	ATGCAT	1 cut(s)	1318

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.