AT3G45640

mitogen-activated protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0015797
Physical Location & Seq
Forward (+)
16756571 .. 16758874
2304 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G45640.1

Sequence Viewer

Length: 1113 bp
ATGAACACCGGCGGTGGCCAATACACGGATTTTCCGGCGGTGGAAACTCACGGAGGACAGTTCATAAGTTACGATATCTTCGGTAGTTTATTCGAGATCACATCTAAGTATCGTCCTCCGATTATACCAATTGGTCGTGGAGCTTATGGAATCGTTTGCTCTGTGTTGGATACGGAGACGAACGAGCTAGTAGCGATGAAGAAGATAGCTAATGCTTTTGATAATCATATGGATGCTAAGCGTACGCTTCGTGAGATCAAGCTTCTTCGTCATCTTGATCATGAAAACATTATAGCTATAAGAGATGTTGTTCCACCACCACTAAGAAGACAGTTCAGTGATGTTTATATCTCTACTGAATTAATGGATACTGATCTTCATCAAATCATCAGATCTAACCAGAGTTTATCAGAAGAACACTGTCAGTACTTCTTGTACCAGCTACTTCGAGGACTGAAGTATATCCACTCAGCTAACATTATTCATAGGGATTTAAAGCCGAGCAATCTTCTGTTGAACGCGAATTGCGATTTAAAGATTTGTGATTTCGGTCTTGCTAGACCTACTTCAGAGAATGATTTTATGACTGAGTATGTTGTTACGAGATGGTATAGAGCACCTGAGCTTCTGTTGAACTCTTCAGATTACACAGCTGCTATTGATGTTTGGTCTGTTGGTTGTATCTTTATGGAGCTTATGAATAGAAAGCCTTTGTTCCCTGGTAAAGACCATGTTCATCAAATGCGCTTATTGACAGAGTTGCTTGGCACACCGACAGAATCTGATCTCGGTTTTACTCACAATGAGGATGCGAAAAGATACATCCGGCAACTTCCCAACTTCCCACGTCAGCCCTTAGCTAAACTTTTCTCTCATGTTAACCCAATGGCCATTGATCTTGTTGACAGAATGTTGACGTTTGACCCCAACAGAAGAATCACTGTTGAACAAGCTCTGAATCACCAGTACCTTGCTAAATTGCACGACCCGAATGATGAGCCAATCTGTCAAAAGCCATTCTCTTTTGAGTTCGAACAACAGCCTCTGGATGAGGAACAGATAAAAGAGATGATCTACCAAGAAGCCATAGCACTCAATCCAACATACGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000165 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004707 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006725 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0006950 GO:0006970 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009403 GO:0009404 GO:0009409 GO:0009411 GO:0009416 GO:0009555 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009628 GO:0009700 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009791 GO:0009856 GO:0009908 GO:0009987 GO:0010033 GO:0010120 GO:0010183 GO:0010200 GO:0010224 GO:0010229 GO:0010243 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018130 GO:0019222 GO:0019438 GO:0019538 GO:0019748 GO:0022414 GO:0023014 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0033554 GO:0033993 GO:0034641 GO:0035556 GO:0035670 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0042430 GO:0042435 GO:0042493 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044272 GO:0044424 GO:0044464 GO:0044550 GO:0044706 GO:0046217 GO:0046483 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048583 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0048868 GO:0050789 GO:0050794 GO:0050826 GO:0050896 GO:0050918 GO:0051704 GO:0051707 GO:0051716 GO:0052314 GO:0052315 GO:0052317 GO:0060255 GO:0061458 GO:0065007 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071704 GO:0080134 GO:0080135 GO:0080136 GO:0090567 GO:0097305 GO:0097306 GO:0099402 GO:0140096 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901698 GO:1901700 GO:1901701
KEGG Pathways
Metabolic & Signaling
ko04016 map04016
Pfam Domains
Protein Families
Pkinase

Protein Analysis

370

Amino Acids

42.72

Weight (kDa)

5.61

Isoelectric Point (pI)

36.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 44 - 324 5.2e-72 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 44 - 235 1.7e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015797)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G45640
fragaria_vesca FvH4_3g33900
malus_domestica MD03G1108500.v1.1 MD11G1121500.v1.1
prunus_persica Prupe.6G091700_v2.0.a1
rosa_chinensis RchiOBHm_Chr5g0061451
rosa_laevigata RLG00000035478
rosa_multiflora Rmu_sc0000671.1_g000003
rosa_roxburghii Rroxscaffold_1G00019230
rosa_rugosa Rorug05G0340400
rosa_samantha Rh5AG402700 Rh5BG415200 Rh5CG439900 Rh5DG429800
rosa_wichuraiana Rw5G037880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 521
AciI CCGC 2 cut(s) 12, 38
AcoI YGGCCR 2 cut(s) 16, 888
AcuI CTGAAG 3 cut(s) 476, 552, 624
AfaI GTAC 4 cut(s) 244, 428, 437, 968
AfiI CCNNNNNNNGG 2 cut(s) 25, 1106
AgsI TTSAA 3 cut(s) 517, 634, 947
AjiI CACGTC 1 cut(s) 848
AjnI CCWGG 1 cut(s) 718
Alw21I GWGCWC 1 cut(s) 619
Alw26I GTCTC 1 cut(s) 170
AlwNI CAGNNNCTG 2 cut(s) 782, 1045
AoxI GGCC 2 cut(s) 16, 888
ApeKI GCWGC 1 cut(s) 653
AseI ATTAAT 1 cut(s) 362
AspLEI GCGC 1 cut(s) 747
AsuHPI GGTGA 1 cut(s) 953
AsuII TTCGAA 1 cut(s) 1032
BalI TGGCCA 2 cut(s) 18, 890
BbsI GAAGAC 1 cut(s) 334
Bbv12I GWGCWC 1 cut(s) 619
BbvI GCAGC 1 cut(s) 640
BccI CCATC 1 cut(s) 600
BciT130I CCWGG 1 cut(s) 720
BciVI GTATCC 2 cut(s) 163, 361
BclI TGATCA 1 cut(s) 277
BcoDI GTCTC 1 cut(s) 170
BfaI CTAG 2 cut(s) 188, 558
BfuI GTATCC 2 cut(s) 163, 361
BglII AGATCT 1 cut(s) 392
BisI GCNGC 1 cut(s) 654
BlpI GCTNAGC 1 cut(s) 237
BlsI GCNGC 1 cut(s) 655
BmcAI AGTACT 1 cut(s) 428
Bme1390I CCNGG 1 cut(s) 720
BmgBI CACGTC 1 cut(s) 848
BmrFI CCNGG 1 cut(s) 720
BmsI GCATC 2 cut(s) 223, 799
BpiI GAAGAC 1 cut(s) 334
Bpu10I CCTNAGC 2 cut(s) 621, 856
Bpu1102I GCTNAGC 1 cut(s) 237
Bpu14I TTCGAA 1 cut(s) 1032
BsaBI GATNNNNATC 2 cut(s) 372, 378
BsaJI CCNNGG 1 cut(s) 718
Bsc4I CCNNNNNNNGG 2 cut(s) 25, 1106
Bse118I RCCGGY 1 cut(s) 8
Bse1I ACTGG 1 cut(s) 964
Bse8I GATNNNNATC 2 cut(s) 372, 378
BseBI CCWGG 1 cut(s) 720
BseDI CCNNGG 1 cut(s) 718
BseGI GGATG 4 cut(s) 238, 814, 822, 1054
BseJI GATNNNNATC 2 cut(s) 372, 378
BseLI CCNNNNNNNGG 2 cut(s) 25, 1106
BseMII CTCAG 3 cut(s) 483, 579, 612
BseNI ACTGG 1 cut(s) 964
BseXI GCAGC 1 cut(s) 640
Bsh1236I CGCG 1 cut(s) 521
BshFI GGCC 2 cut(s) 18, 890
BsiHKAI GWGCWC 1 cut(s) 619
BsiSI CCGG 3 cut(s) 9, 35, 826
BsiWI CGTACG 1 cut(s) 242
BslI CCNNNNNNNGG 2 cut(s) 25, 1106
BsmAI GTCTC 1 cut(s) 170
BsmBI CGTCTC 1 cut(s) 170
BsnI GGCC 2 cut(s) 18, 890
Bsp119I TTCGAA 1 cut(s) 1032
Bsp1286I GDGCHC 1 cut(s) 619
Bsp143I GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
Bsp1720I GCTNAGC 1 cut(s) 237
BspACI CCGC 2 cut(s) 12, 38
BspANI GGCC 2 cut(s) 18, 890
BspCNI CTCAG 3 cut(s) 482, 580, 613
BspFNI CGCG 1 cut(s) 521
BspHI TCATGA 1 cut(s) 280
BspT104I TTCGAA 1 cut(s) 1032
BsrFI RCCGGY 1 cut(s) 8
BsrI ACTGG 1 cut(s) 964
BssAI RCCGGY 1 cut(s) 8
BssECI CCNNGG 1 cut(s) 718
BssMI GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
Bst2UI CCWGG 1 cut(s) 720
Bst4CI ACNGT 5 cut(s) 60, 333, 422, 943, 1109
Bst6I CTCTTC 1 cut(s) 643
BstBI TTCGAA 1 cut(s) 1032
BstDEI CTNAG 7 cut(s) 105, 237, 323, 469, 588, 621, 856
BstF5I GGATG 4 cut(s) 238, 814, 822, 1054
BstFNI CGCG 1 cut(s) 521
BstHHI GCGC 1 cut(s) 747
BstKTI GATC 8 cut(s) 99, 258, 280, 376, 395, 787, 898, 1074
BstMAI GTCTC 1 cut(s) 170
BstMBI GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
BstNI CCWGG 1 cut(s) 720
BstSCI CCNGG 1 cut(s) 718
BstUI CGCG 1 cut(s) 521
BstV1I GCAGC 1 cut(s) 640
BstV2I GAAGAC 1 cut(s) 334
BstX2I RGATCY 1 cut(s) 392
BstYI RGATCY 1 cut(s) 392
BsuI GTATCC 2 cut(s) 163, 361
BsuRI GGCC 2 cut(s) 18, 890
BtgZI GCGATG 1 cut(s) 209
BtrI CACGTC 1 cut(s) 848
BtsCI GGATG 4 cut(s) 238, 814, 822, 1054
BtsIMutI CAGTG 3 cut(s) 343, 418, 939
CaiI CAGNNNCTG 2 cut(s) 782, 1045
CciI TCATGA 1 cut(s) 280
CfoI GCGC 1 cut(s) 747
Cfr10I RCCGGY 1 cut(s) 8
Csp6I GTAC 4 cut(s) 243, 427, 436, 967
CviAII CATG 3 cut(s) 281, 731, 875
CviQI GTAC 4 cut(s) 243, 427, 436, 967
DdeI CTNAG 7 cut(s) 105, 237, 323, 469, 588, 621, 856
DpnI GATC 8 cut(s) 98, 257, 279, 375, 394, 786, 897, 1073
DpnII GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
DraI TTTAAA 2 cut(s) 495, 534
EaeI YGGCCR 2 cut(s) 16, 888
Eam1104I CTCTTC 1 cut(s) 643
EarI CTCTTC 1 cut(s) 643
Eco32I GATATC 1 cut(s) 76
Eco57I CTGAAG 3 cut(s) 476, 552, 624
EcoRII CCWGG 1 cut(s) 718
EcoRV GATATC 1 cut(s) 76
Esp3I CGTCTC 1 cut(s) 170
FaeI CATG 3 cut(s) 284, 734, 878
FatI CATG 3 cut(s) 280, 730, 874
FauNDI CATATG 1 cut(s) 228
FbaI TGATCA 1 cut(s) 277
Fnu4HI GCNGC 1 cut(s) 654
FokI GGATG 4 cut(s) 245, 809, 821, 1061
Fsp4HI GCNGC 1 cut(s) 654
FspBI CTAG 2 cut(s) 188, 558
GlaI GCGC 1 cut(s) 746
GluI GCNGC 1 cut(s) 654
HaeIII GGCC 2 cut(s) 18, 890
HapII CCGG 3 cut(s) 9, 35, 826
HhaI GCGC 1 cut(s) 747
Hin1II CATG 3 cut(s) 284, 734, 878
Hin6I GCGC 1 cut(s) 745
HinP1I GCGC 1 cut(s) 745
HincII GTYRAC 3 cut(s) 880, 904, 915
HindII GTYRAC 3 cut(s) 880, 904, 915
HindIII AAGCTT 1 cut(s) 260
HinfI GANTC 4 cut(s) 150, 779, 936, 958
HpaI GTTAAC 1 cut(s) 880
HpaII CCGG 3 cut(s) 9, 35, 826
HphI GGTGA 1 cut(s) 953
Hpy166II GTNNAC 3 cut(s) 880, 904, 915
Hpy188I TCNGA 7 cut(s) 120, 392, 412, 571, 643, 784, 957
Hpy188III TCNNGA 5 cut(s) 94, 251, 275, 281, 1046
Hpy8I GTNNAC 3 cut(s) 880, 904, 915
HpyCH4III ACNGT 5 cut(s) 60, 333, 422, 943, 1109
HpyCH4IV ACGT 2 cut(s) 847, 917
HpyCH4V TGCA 1 cut(s) 982
HpyF3I CTNAG 7 cut(s) 105, 237, 323, 469, 588, 621, 856
HpySE526I ACGT 2 cut(s) 847, 917
Hsp92II CATG 3 cut(s) 284, 734, 878
HspAI GCGC 1 cut(s) 745
Ksp22I TGATCA 1 cut(s) 277
KspAI GTTAAC 1 cut(s) 880
Kzo9I GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
LmnI GCTCC 2 cut(s) 140, 691
Lsp1109I GCAGC 1 cut(s) 640
LweI GCATC 2 cut(s) 223, 799
MaeI CTAG 2 cut(s) 188, 558
MaeII ACGT 2 cut(s) 847, 917
MaeIII GTNAC 2 cut(s) 68, 598
MalI GATC 8 cut(s) 98, 257, 279, 375, 394, 786, 897, 1073
MboI GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
MfeI CAATTG 1 cut(s) 129
MflI RGATCY 1 cut(s) 392
MhlI GDGCHC 1 cut(s) 619
MlsI TGGCCA 2 cut(s) 18, 890
MluCI AATT 4 cut(s) 129, 359, 523, 977
MluNI TGGCCA 2 cut(s) 18, 890
MmeI TCCRAC 1 cut(s) 147
MnlI CCTC 6 cut(s) 47, 126, 443, 799, 1045, 1053
Mox20I TGGCCA 2 cut(s) 18, 890
MscI TGGCCA 2 cut(s) 18, 890
MseI TTAA 4 cut(s) 362, 494, 533, 879
MslI CAYNNNNRTG 1 cut(s) 231
Msp20I TGGCCA 2 cut(s) 18, 890
MspA1I CMGCKG 1 cut(s) 653
MspI CCGG 3 cut(s) 9, 35, 826
MspR9I CCNGG 1 cut(s) 720
MunI CAATTG 1 cut(s) 129
MvaI CCWGG 1 cut(s) 720
MvnI CGCG 1 cut(s) 521
NdeI CATATG 1 cut(s) 228
NdeII GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
NlaIII CATG 3 cut(s) 284, 734, 878
NmeAIII GCCGAG 1 cut(s) 525
NspV TTCGAA 1 cut(s) 1032
PagI TCATGA 1 cut(s) 280
PcsI WCGNNNNNNNCGW 1 cut(s) 525
PfeI GAWTC 4 cut(s) 150, 779, 936, 958
Pfl23II CGTACG 1 cut(s) 242
PkrI GCNGC 1 cut(s) 655
PshBI ATTAAT 1 cut(s) 362
Psp6I CCWGG 1 cut(s) 718
PspGI CCWGG 1 cut(s) 718
PspLI CGTACG 1 cut(s) 242
PstNI CAGNNNCTG 2 cut(s) 782, 1045
PsuI RGATCY 1 cut(s) 392
PvuII CAGCTG 1 cut(s) 653
RsaI GTAC 4 cut(s) 244, 428, 437, 968
RsaNI GTAC 4 cut(s) 243, 427, 436, 967
RseI CAYNNNNRTG 1 cut(s) 231
SaqAI TTAA 4 cut(s) 362, 494, 533, 879
SatI GCNGC 1 cut(s) 654
Sau3AI GATC 8 cut(s) 96, 255, 277, 373, 392, 784, 895, 1071
ScaI AGTACT 1 cut(s) 428
ScrFI CCNGG 1 cut(s) 720
SduI GDGCHC 1 cut(s) 619
SfaNI GCATC 2 cut(s) 223, 799
SfuI TTCGAA 1 cut(s) 1032
SgrAI CRCCGGYG 1 cut(s) 8
SmiMI CAYNNNNRTG 1 cut(s) 231
Sse9I AATT 4 cut(s) 129, 359, 523, 977
SsiI CCGC 2 cut(s) 12, 38
SspMI CTAG 2 cut(s) 188, 558
StyD4I CCNGG 1 cut(s) 718
TaaI ACNGT 5 cut(s) 60, 333, 422, 943, 1109
TaiI ACGT 2 cut(s) 850, 920
TaqI TCGA 3 cut(s) 93, 448, 1032
TaqII GACCGA 1 cut(s) 539
TasI AATT 4 cut(s) 129, 359, 523, 977
TatI WGTACW 1 cut(s) 426
TfiI GAWTC 4 cut(s) 150, 779, 936, 958
Tru1I TTAA 4 cut(s) 362, 494, 533, 879
Tru9I TTAA 4 cut(s) 362, 494, 533, 879
TscAI CASTG 3 cut(s) 343, 425, 946
TseI GCWGC 1 cut(s) 653
TspDTI ATGAA 8 cut(s) 17, 52, 212, 297, 368, 473, 713, 725
TspGWI ACGGA 3 cut(s) 41, 66, 188
TspRI CASTG 3 cut(s) 343, 425, 946
VspI ATTAAT 1 cut(s) 362
XspI CTAG 2 cut(s) 188, 558
ZrmI AGTACT 1 cut(s) 428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.