AT3G46420

leucine-rich repeat protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0020936
Physical Location & Seq
Forward (+)
17082108 .. 17086534
4427 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G46420.1

Sequence Viewer

Length: 2517 bp
ATGGAGAGTCTCAAGAAGCTTTTGTTGGTTGCATTAATAGCAACTTCTGCCATTCACCTTGTTCAAGCTCAAAATCAAGACGGATTTATCAGTGTAGACTGCGGATTATCTCCTAATGAGGTCTCTCCTTATATTGAGCCGTTTACTGGACTACAGTTCACAACGGATTCAAATTTCATTGAAACCGGAAAACTTGGTAGAATTCAGGCAAGCCTAGAGCCGAAGTACCGAAAGTCGCAAACGACGTTGAGATATTTTCCTGATGGAATACGCAACTGTTACAATCTTACAGTGACACAAGGAACCAACTATTTAATCAGAGCTAGAGCAATATATGGGAATTATGATGGTCTTAACATTTATCCTAAATTTGACTTGTACATAGGCCCTAATTTTTGGGTAACAATAGACTTAGGAAAGTATGTAAATGGTACATGGGAGGAGATCATCTACATACCAAAATCTAATATGTTGGACGTGTGTCTTGTCAAGACAGGGCCGTCCACACCATTGATATCATCCTTGGTGTTAAGGCCTCTTGCAAATGCTACTTACATCACTCAATCTGGTTGGTTGAAGACTTATGTTCGGGTTTATCTAAGCGACTCAAATGACGTCATACGATATCCGGATGATGTCTATGATCGTATATGGGGTTCATACTTTGAGCCGGAGTGGAAGAAGATTTCCACTACACTTGGAGTGAACAGTTCTAGTGGATTTCTGCCTCCACTAAAGGCACTCATGACTGCCGCCTCTCCTGCCAATGCTAGTGCACCATTGGCTATTCCCGGAGTACTAGATTTCCCAAGTGATAAACTATACTTGTTCCTCCACTTCTCTGAGATTCAAGTCTTAAAGGCCAACGAAACTAGAGAGTTCGAAATTTTTTGGAATAAAAAGCTTGTTTACAATGCTTATAGTCCTGTATATCTACAGACCAAGACTATACGCAACCCATCTCCAGTTACTTGTGAAAGAGGAGAATGCATACTAGAGATGATCAAAACTGAGAGGTCAACTCTCCCGCCTTTGCTTAACGCCGTTGAAGTTTTCACAGTGGTTGAATTTCCTCAGCCGGAAACAGATGCTAGTGATGTGGTGGCTATAAAAAACATCAAGGCCATCTATGGATTGACTCGAGTCACATGGCAAGGAGATCCATGTGTTCCTCAACAATTTTTGTGGAACGGTTTAAATTGCAACAGCATGGAGACGTCTACACCTCCAAGAATCACTTCCTTGGACTTGTCTTCAAGCGGGTTAACCGGAAGCATATCAGTTGTTATTCAAAATCTTACCCATCTAGAAAAGTTGGATTTGTCAAATAACAACTTGACTGGGGAAGTTCCCGATTTTCTAGCAAACATGAAATTTCTTGTGTTCATAAACTTAAGCAAGAACAATCTGAATGGTTCGATTCCTAAAGCTCTTCGCGATAGAGAAAATAAAGGACTTAAGTTAATTGTCGACAAAAATGTGGACAACTGCTCATCTGGTTCATGCACCCAAAAAAAGAAATTCCCATTGCTTATTGTTGCATTAACTGTTTCGTTGATCCTAGTCAGTACAGTGGTTATAGACATGACAAATAACTTCCAAAGAGCTCTAGGAGAAGGAGGGTTTGGTGTCGTTTATCATGGTTATTTGAATGGTTCAGAGCAAGTAGCTGTCAAATTACTTTCGCAATCATCAGTACAAGGCTATAAAGAATTCAAGGCAGAGGTTGAACTTCTTCTAAGGGTTCACCATATAAATTTGGTAAGCCTTGTTGGGTATTGCGATGATCGCAATCACTTGGCTCTCGTCTACGAATACATGTCCAATGGAGACTTAAAACATCATTTGTCAGGAAGAAACAATGGTTTTGTTTTGAGTTGGAGTACTCGACTACAAATAGCTGTCGATGCTGCACTAGGATTGGAATACTTACATATTGGATGCCGACCATCGATGGTGCATAGAGATGTCAAAAGTACGAATATACTGTTGGGTGAGCAGTTCACAGCCAAGATGGCTGATTTTGGGCTTTCAAGGTCTTTCCAAATTGGTGATGAAAATCATATTTCTACGGTTGTTGCTGGTACTCCTGGATATCTTGATCCCGAATACTACAGAACAAGTCGGTTGGCTGAGAAGAGCGATATCTACAGTTTTGGGATTGTGTTATTGGAAATGATCACAAGCCAACATGCGATTGATCGAACCCGCGTGAAACATCACATAACAGACTGGGTGGTGTCTTTGATTAGCAGAGGAGATATCACACGGATCATTGATCCCAATCTTCAGGGCAATTATAATTCTCGCTCTGTCTGGAGAGCTCTTGAATTGGCTATGTCATGTGCAAACCCTACATCAGAAAAACGACCAAACATGTCACAAGTTGTTATCGATCTGAAAGAATGTCTTGCTACTGAAAATTCAACGAGAAGTGAGAAAGACATGAGTTCTCATAGTTCTGATCTTGATCGTAGCATGAACTTTTACACCGACATGGTTCCTAGAGCTAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001653 GO:0002229 GO:0002237 GO:0002238 GO:0002239 GO:0002376 GO:0002831 GO:0002832 GO:0002833 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009787 GO:0009788 GO:0009790 GO:0009791 GO:0009793 GO:0009845 GO:0009888 GO:0009960 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010154 GO:0010200 GO:0010243 GO:0010646 GO:0010648 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023051 GO:0023052 GO:0023057 GO:0031347 GO:0031348 GO:0031349 GO:0032101 GO:0032102 GO:0032103 GO:0032501 GO:0032502 GO:0032879 GO:0036211 GO:0038023 GO:0042221 GO:0042493 GO:0042802 GO:0042803 GO:0042995 GO:0043170 GO:0043207 GO:0043412 GO:0043900 GO:0043901 GO:0043902 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045087 GO:0046777 GO:0046983 GO:0048316 GO:0048518 GO:0048519 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0060089 GO:0061458 GO:0065007 GO:0071704 GO:0071944 GO:0080134 GO:0090351 GO:0090406 GO:0098542 GO:0120025 GO:0140096 GO:1900150 GO:1900424 GO:1900426 GO:1901419 GO:1901420 GO:1901564 GO:1901698 GO:1901700 GO:1902288 GO:1902289 GO:1905957 GO:1905958 GO:2000071
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_4 LRR_8 Malectin_like Pkinase Pkinase_Tyr

Protein Analysis

838

Amino Acids

93.77

Weight (kDa)

6.62

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 32 - 354 2.5e-119 Malectin-like domain
LRR_8 PF13855 410 - 470 1.1e-06 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 533 - 799 2.8e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 534 - 797 1.5e-42 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0020936)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G46340 AT3G46370 AT3G46370 AT3G46400 AT3G46420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2301
AasI GACNNNNNNGTC 1 cut(s) 499
AatII GACGTC 2 cut(s) 618, 1220
AccI GTMKAC 4 cut(s) 96, 1220, 1470, 1809
AccII CGCG 2 cut(s) 1437, 2211
AccIII TCCGGA 1 cut(s) 628
AciI CCGC 5 cut(s) 102, 753, 1028, 1260, 2209
AclWI GGATC 5 cut(s) 1154, 1552, 2096, 2273, 2279
AcuI CTGAAG 1 cut(s) 2273
AcyI GRCGYC 2 cut(s) 615, 1217
AfaI GTAC 9 cut(s) 227, 380, 433, 798, 1570, 1698, 1885, 1978, 2086
AfiI CCNNNNNNNGG 1 cut(s) 146
AflII CTTAAG 2 cut(s) 1393, 1457
AflIII ACRYGT 3 cut(s) 477, 1818, 2376
AjiI CACGTC 1 cut(s) 478
AjnI CCWGG 1 cut(s) 2089
AjuI GAANNNNNNNTTGG 8 cut(s) 8, 40, 1222, 1254, 1608, 1640, 1973, 2005
Alw21I GWGCWC 3 cut(s) 778, 1609, 2326
Alw26I GTCTC 4 cut(s) 14, 127, 1208, 1824
Alw44I GTGCAC 1 cut(s) 774
AlwI GGATC 5 cut(s) 1154, 1552, 2096, 2273, 2279
Ama87I CYCGRG 1 cut(s) 1140
Aor13HI TCCGGA 1 cut(s) 628
AoxI GGCC 5 cut(s) 385, 497, 533, 861, 1122
ApaLI GTGCAC 1 cut(s) 774
ApeKI GCWGC 1 cut(s) 1910
AseI ATTAAT 1 cut(s) 35
Asp700I GAANNNNTTC 2 cut(s) 1237, 1734
AspS9I GGNCC 2 cut(s) 386, 497
AsuC2I CCSGG 1 cut(s) 792
AsuHPI GGTGA 4 cut(s) 47, 1739, 2006, 2063
AsuII TTCGAA 1 cut(s) 882
AvaI CYCGRG 1 cut(s) 1140
BaeGI GKGCMC 1 cut(s) 778
BanII GRGCYC 2 cut(s) 1609, 2326
BbsI GAAGAC 2 cut(s) 584, 1245
Bbv12I GWGCWC 3 cut(s) 778, 1609, 2326
BbvCI CCTCAGC 1 cut(s) 1074
BbvI GCAGC 1 cut(s) 1897
BccI CCATC 8 cut(s) 257, 341, 967, 1133, 1311, 1948, 1957, 2008
BceAI ACGGC 3 cut(s) 124, 484, 1028
BciT130I CCWGG 1 cut(s) 2091
BclI TGATCA 2 cut(s) 1002, 2178
BcnI CCSGG 1 cut(s) 792
BcoDI GTCTC 4 cut(s) 14, 127, 1208, 1824
BfmI CTRYAG 4 cut(s) 152, 935, 2113, 2149
BfrI CTTAAG 2 cut(s) 1393, 1457
BglI GCCNNNNNGGC 1 cut(s) 2015
BisI GCNGC 2 cut(s) 753, 1911
BlsI GCNGC 2 cut(s) 754, 1912
BmcAI AGTACT 2 cut(s) 798, 1885
Bme1390I CCNGG 2 cut(s) 792, 2091
BmeT110I CYCGRG 1 cut(s) 1140
BmgBI CACGTC 1 cut(s) 478
BmgT120I GGNCC 2 cut(s) 386, 497
BmiI GGNNCC 2 cut(s) 304, 2502
BmrFI CCNGG 2 cut(s) 792, 2091
BmrI ACTGGG 2 cut(s) 1350, 2242
BmsI GCATC 3 cut(s) 1078, 1897, 1931
BmuI ACTGGG 2 cut(s) 1350, 2242
BoxI GACNNNNGTC 2 cut(s) 480, 1142
BpiI GAAGAC 2 cut(s) 584, 1245
BplI GAGNNNNNCTC 2 cut(s) 1006, 1038
BpmI CTGGAG 2 cut(s) 948, 2338
Bpu10I CCTNAGC 1 cut(s) 1074
Bpu14I TTCGAA 1 cut(s) 882
BpuMI CCSGG 1 cut(s) 792
Bsa29I ATCGAT 2 cut(s) 1952, 2394
BsaBI GATNNNNATC 4 cut(s) 1791, 2058, 2283, 2469
BsaHI GRCGYC 2 cut(s) 615, 1217
BsaI GGTCTC 1 cut(s) 127
BsaJI CCNNGG 2 cut(s) 522, 1242
BsaWI WCCGGW 3 cut(s) 185, 628, 1268
Bsc4I CCNNNNNNNGG 1 cut(s) 146
Bse1I ACTGG 4 cut(s) 151, 965, 1345, 2237
Bse3DI GCAATG 1 cut(s) 1526
Bse8I GATNNNNATC 4 cut(s) 1791, 2058, 2283, 2469
BseAI TCCGGA 1 cut(s) 628
BseBI CCWGG 1 cut(s) 2091
BseCI ATCGAT 2 cut(s) 1952, 2394
BseDI CCNNGG 2 cut(s) 522, 1242
BseGI GGATG 3 cut(s) 518, 637, 1946
BseJI GATNNNNATC 4 cut(s) 1791, 2058, 2283, 2469
BseLI CCNNNNNNNGG 1 cut(s) 146
BseMI GCAATG 1 cut(s) 1526
BseMII CTCAG 4 cut(s) 834, 1002, 1088, 2124
BseNI ACTGG 4 cut(s) 151, 965, 1345, 2237
BseRI GAGGAG 3 cut(s) 455, 996, 2271
BseSI GKGCMC 1 cut(s) 778
BseXI GCAGC 1 cut(s) 1897
BsgI GTGCAG 1 cut(s) 1896
Bsh1236I CGCG 2 cut(s) 1437, 2211
BshFI GGCC 5 cut(s) 387, 499, 535, 863, 1124
BshVI ATCGAT 2 cut(s) 1952, 2394
BsiHKAI GWGCWC 3 cut(s) 778, 1609, 2326
BsiHKCI CYCGRG 1 cut(s) 1140
BsiSI CCGG 6 cut(s) 186, 629, 671, 792, 1079, 1269
BslI CCNNNNNNNGG 1 cut(s) 146
BsmAI GTCTC 4 cut(s) 14, 127, 1208, 1824
BsmBI CGTCTC 1 cut(s) 1208
BsmI GAATGC 1 cut(s) 992
BsnI GGCC 5 cut(s) 387, 499, 535, 863, 1124
Bso31I GGTCTC 1 cut(s) 127
BsoBI CYCGRG 1 cut(s) 1140
Bsp119I TTCGAA 1 cut(s) 882
Bsp1286I GDGCHC 3 cut(s) 778, 1609, 2326
Bsp13I TCCGGA 1 cut(s) 628
Bsp1407I TGTACA 1 cut(s) 378
Bsp68I TCGCGA 1 cut(s) 1437
BspACI CCGC 5 cut(s) 102, 753, 1028, 1260, 2209
BspANI GGCC 5 cut(s) 387, 499, 535, 863, 1124
BspCNI CTCAG 4 cut(s) 835, 1003, 1087, 2125
BspDI ATCGAT 2 cut(s) 1952, 2394
BspEI TCCGGA 1 cut(s) 628
BspFNI CGCG 2 cut(s) 1437, 2211
BspHI TCATGA 1 cut(s) 744
BspLI GGNNCC 2 cut(s) 304, 2502
BspPI GGATC 5 cut(s) 1154, 1552, 2096, 2273, 2279
BspQI GCTCTTC 2 cut(s) 1437, 2132
BspT104I TTCGAA 1 cut(s) 882
BspTI CTTAAG 2 cut(s) 1393, 1457
BspTNI GGTCTC 1 cut(s) 127
BsrDI GCAATG 1 cut(s) 1526
BsrGI TGTACA 1 cut(s) 378
BsrI ACTGG 4 cut(s) 151, 965, 1345, 2237
BssECI CCNNGG 2 cut(s) 522, 1242
BssNI GRCGYC 2 cut(s) 615, 1217
BssT1I CCWWGG 2 cut(s) 522, 1242
Bst2UI CCWGG 1 cut(s) 2091
Bst6I CTCTTC 2 cut(s) 1437, 2132
BstACI GRCGYC 2 cut(s) 615, 1217
BstAFI CTTAAG 2 cut(s) 1393, 1457
BstAPI GCANNNNNTGC 1 cut(s) 47
BstAUI TGTACA 1 cut(s) 378
BstBI TTCGAA 1 cut(s) 882
BstC8I GCNNGC 1 cut(s) 211
BstDEI CTNAG 7 cut(s) 412, 599, 843, 1011, 1074, 1739, 2133
BstF5I GGATG 3 cut(s) 518, 637, 1946
BstFNI CGCG 2 cut(s) 1437, 2211
BstMAI GTCTC 4 cut(s) 14, 127, 1208, 1824
BstMWI GCNNNNNNNGC 7 cut(s) 38, 47, 761, 782, 1788, 1907, 2015
BstNI CCWGG 1 cut(s) 2091
BstNSI RCATGY 3 cut(s) 1822, 2195, 2380
BstPAI GACNNNNGTC 2 cut(s) 480, 1142
BstSCI CCNGG 2 cut(s) 790, 2089
BstSFI CTRYAG 4 cut(s) 152, 935, 2113, 2149
BstSLI GKGCMC 1 cut(s) 778
BstUI CGCG 2 cut(s) 1437, 2211
BstV1I GCAGC 1 cut(s) 1897
BstV2I GAAGAC 2 cut(s) 584, 1245
BstX2I RGATCY 1 cut(s) 1159
BstYI RGATCY 1 cut(s) 1159
Bsu15I ATCGAT 2 cut(s) 1952, 2394
BsuRI GGCC 5 cut(s) 387, 499, 535, 863, 1124
BsuTUI ATCGAT 2 cut(s) 1952, 2394
BtgZI GCGATG 1 cut(s) 1797
BtrI CACGTC 1 cut(s) 478
BtsCI GGATG 3 cut(s) 518, 637, 1946
BtsIMutI CAGTG 4 cut(s) 97, 297, 1065, 1578
BtuMI TCGCGA 1 cut(s) 1437
Cac8I GCNNGC 1 cut(s) 211
CciI TCATGA 1 cut(s) 744
Cfr13I GGNCC 2 cut(s) 386, 497
ClaI ATCGAT 2 cut(s) 1952, 2394
Csp6I GTAC 9 cut(s) 226, 379, 432, 797, 1569, 1697, 1884, 1977, 2085
CspCI CAANNNNNGTGG 4 cut(s) 679, 714, 1166, 1201
CviQI GTAC 9 cut(s) 226, 379, 432, 797, 1569, 1697, 1884, 1977, 2085
DdeI CTNAG 7 cut(s) 412, 599, 843, 1011, 1074, 1739, 2133
DraI TTTAAA 1 cut(s) 1197
DrdI GACNNNNNNGTC 1 cut(s) 499
DseDI GACNNNNNNGTC 1 cut(s) 499
Eam1104I CTCTTC 2 cut(s) 1437, 2132
EarI CTCTTC 2 cut(s) 1437, 2132
Ecl136II GAGCTC 2 cut(s) 1607, 2324
Eco130I CCWWGG 2 cut(s) 522, 1242
Eco147I AGGCCT 1 cut(s) 535
Eco24I GRGCYC 2 cut(s) 1609, 2326
Eco31I GGTCTC 1 cut(s) 127
Eco32I GATATC 5 cut(s) 516, 626, 2096, 2146, 2263
Eco53kI GAGCTC 2 cut(s) 1607, 2324
Eco57I CTGAAG 1 cut(s) 2273
Eco88I CYCGRG 1 cut(s) 1140
EcoICRI GAGCTC 2 cut(s) 1607, 2324
EcoO109I RGGNCCY 1 cut(s) 386
EcoRI GAATTC 2 cut(s) 201, 1712
EcoRII CCWGG 1 cut(s) 2089
EcoRV GATATC 5 cut(s) 516, 626, 2096, 2146, 2263
EcoT14I CCWWGG 2 cut(s) 522, 1242
EcoT22I ATGCAT 1 cut(s) 992
EcoT38I GRGCYC 2 cut(s) 1609, 2326
ErhI CCWWGG 2 cut(s) 522, 1242
Esp3I CGTCTC 1 cut(s) 1208
FalI AAGNNNNNCTT 4 cut(s) 1222, 1254, 2394, 2426
FauI CCCGC 3 cut(s) 1035, 1253, 2216
FbaI TGATCA 2 cut(s) 1002, 2178
FblI GTMKAC 4 cut(s) 96, 1220, 1470, 1809
Fnu4HI GCNGC 2 cut(s) 753, 1911
FokI GGATG 3 cut(s) 505, 644, 1953
FriOI GRGCYC 2 cut(s) 1609, 2326
Fsp4HI GCNGC 2 cut(s) 753, 1911
GluI GCNGC 2 cut(s) 753, 1911
GsuI CTGGAG 2 cut(s) 948, 2338
HaeIII GGCC 5 cut(s) 387, 499, 535, 863, 1124
HapII CCGG 6 cut(s) 186, 629, 671, 792, 1079, 1269
Hin1I GRCGYC 2 cut(s) 615, 1217
HincII GTYRAC 3 cut(s) 1020, 1266, 1471
HindII GTYRAC 3 cut(s) 1020, 1266, 1471
HindIII AAGCTT 2 cut(s) 17, 902
HinfI GANTC 8 cut(s) 7, 167, 605, 847, 1138, 1143, 1233, 1420
HpaI GTTAAC 1 cut(s) 1266
HpaII CCGG 6 cut(s) 186, 629, 671, 792, 1079, 1269
HphI GGTGA 4 cut(s) 47, 1739, 2006, 2063
Hpy188I TCNGA 7 cut(s) 320, 844, 1410, 1660, 2362, 2400, 2464
Hpy99I CGWCG 1 cut(s) 247
HpyAV CCTTC 1 cut(s) 1610
HpyCH4IV ACGT 4 cut(s) 245, 477, 615, 1217
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 47, 761, 782, 1788, 1907, 2015
HpyF3I CTNAG 7 cut(s) 412, 599, 843, 1011, 1074, 1739, 2133
HpySE526I ACGT 4 cut(s) 245, 477, 615, 1217
Hsp92I GRCGYC 2 cut(s) 615, 1217
Kpn2I TCCGGA 1 cut(s) 628
Ksp22I TGATCA 2 cut(s) 1002, 2178
KspAI GTTAAC 1 cut(s) 1266
LguI GCTCTTC 2 cut(s) 1437, 2132
Lsp1109I GCAGC 1 cut(s) 1897
LweI GCATC 3 cut(s) 1078, 1897, 1931
MaeII ACGT 4 cut(s) 245, 477, 615, 1217
MaeIII GTNAC 6 cut(s) 278, 292, 400, 967, 1144, 2379
MboII GAAGA 9 cut(s) 589, 691, 694, 1245, 1424, 1727, 1866, 2149, 2279
MflI RGATCY 1 cut(s) 1159
MhlI GDGCHC 3 cut(s) 778, 1609, 2326
MlyI GAGTC 4 cut(s) 16, 599, 1132, 1152
MmeI TCCRAC 3 cut(s) 453, 1296, 1859
Mph1103I ATGCAT 1 cut(s) 992
MroI TCCGGA 1 cut(s) 628
MroXI GAANNNNTTC 2 cut(s) 1237, 1734
MslI CAYNNNNRTG 2 cut(s) 1965, 2495
MspCI CTTAAG 2 cut(s) 1393, 1457
MspI CCGG 6 cut(s) 186, 629, 671, 792, 1079, 1269
MspR9I CCNGG 2 cut(s) 792, 2091
Mva1269I GAATGC 1 cut(s) 992
MvaI CCWGG 1 cut(s) 2091
MvnI CGCG 2 cut(s) 1437, 2211
MwoI GCNNNNNNNGC 7 cut(s) 38, 47, 761, 782, 1788, 1907, 2015
NciI CCSGG 1 cut(s) 792
NlaIV GGNNCC 2 cut(s) 304, 2502
NmuCI GTSAC 3 cut(s) 292, 1144, 2379
NruI TCGCGA 1 cut(s) 1437
NsiI ATGCAT 1 cut(s) 992
NspI RCATGY 3 cut(s) 1822, 2195, 2380
NspV TTCGAA 1 cut(s) 882
PaeR7I CTCGAG 1 cut(s) 1140
PagI TCATGA 1 cut(s) 744
PceI AGGCCT 1 cut(s) 535
PciI ACATGT 2 cut(s) 1818, 2376
PciSI GCTCTTC 2 cut(s) 1437, 2132
PcsI WCGNNNNNNNCGW 1 cut(s) 242
PctI GAATGC 1 cut(s) 992
PdmI GAANNNNTTC 2 cut(s) 1237, 1734
PfeI GAWTC 4 cut(s) 167, 847, 1233, 1420
PfoI TCCNGGA 2 cut(s) 790, 2089
PkrI GCNGC 2 cut(s) 754, 1912
PleI GAGTC 4 cut(s) 15, 599, 1132, 1151
PpsI GAGTC 4 cut(s) 15, 599, 1132, 1151
PscI ACATGT 2 cut(s) 1818, 2376
PshAI GACNNNNGTC 2 cut(s) 480, 1142
PshBI ATTAAT 1 cut(s) 35
PsiI TTATAA 1 cut(s) 2301
Psp124BI GAGCTC 2 cut(s) 1609, 2326
Psp6I CCWGG 1 cut(s) 2089
PspGI CCWGG 1 cut(s) 2089
PspN4I GGNNCC 2 cut(s) 304, 2502
PspPI GGNCC 2 cut(s) 386, 497
PspXI VCTCGAGB 1 cut(s) 1140
PsrI GAACNNNNNNTAC 2 cut(s) 640, 672
PsuI RGATCY 1 cut(s) 1159
RruI TCGCGA 1 cut(s) 1437
RsaI GTAC 9 cut(s) 227, 380, 433, 798, 1570, 1698, 1885, 1978, 2086
RsaNI GTAC 9 cut(s) 226, 379, 432, 797, 1569, 1697, 1884, 1977, 2085
RseI CAYNNNNRTG 2 cut(s) 1965, 2495
SacI GAGCTC 2 cut(s) 1609, 2326
SalI GTCGAC 1 cut(s) 1469
SapI GCTCTTC 2 cut(s) 1437, 2132
SatI GCNGC 2 cut(s) 753, 1911
Sau96I GGNCC 2 cut(s) 386, 497
ScaI AGTACT 2 cut(s) 798, 1885
SchI GAGTC 4 cut(s) 16, 599, 1132, 1152
ScrFI CCNGG 2 cut(s) 792, 2091
SduI GDGCHC 3 cut(s) 778, 1609, 2326
SfaNI GCATC 3 cut(s) 1078, 1897, 1931
SfcI CTRYAG 4 cut(s) 152, 935, 2113, 2149
Sfr274I CTCGAG 1 cut(s) 1140
SfuI TTCGAA 1 cut(s) 882
SlaI CTCGAG 1 cut(s) 1140
SmiMI CAYNNNNRTG 2 cut(s) 1965, 2495
SmlI CTYRAG 4 cut(s) 11, 1140, 1393, 1457
SmoI CTYRAG 4 cut(s) 11, 1140, 1393, 1457
SseBI AGGCCT 1 cut(s) 535
SsiI CCGC 5 cut(s) 102, 753, 1028, 1260, 2209
SstI GAGCTC 2 cut(s) 1609, 2326
StuI AGGCCT 1 cut(s) 535
StyD4I CCNGG 2 cut(s) 790, 2089
StyI CCWWGG 2 cut(s) 522, 1242
TaiI ACGT 4 cut(s) 248, 480, 618, 1220
TaqI TCGA 9 cut(s) 882, 1141, 1418, 1470, 1888, 1905, 1952, 2203, 2394
TatI WGTACW 5 cut(s) 378, 796, 1568, 1696, 1883
TauI GCSGC 1 cut(s) 755
TfiI GAWTC 4 cut(s) 167, 847, 1233, 1420
TscAI CASTG 4 cut(s) 97, 297, 1065, 1578
TseFI GTSAC 3 cut(s) 292, 1144, 2379
TseI GCWGC 1 cut(s) 1910
Tsp45I GTSAC 3 cut(s) 292, 1144, 2379
TspDTI ATGAA 7 cut(s) 166, 648, 1375, 1385, 1491, 2070, 2495
TspGWI ACGGA 3 cut(s) 96, 179, 2284
TspRI CASTG 4 cut(s) 97, 297, 1065, 1578
Vha464I CTTAAG 2 cut(s) 1393, 1457
VneI GTGCAC 1 cut(s) 774
VspI ATTAAT 1 cut(s) 35
XbaI TCTAGA 1 cut(s) 1306
XceI RCATGY 3 cut(s) 1822, 2195, 2380
XhoI CTCGAG 1 cut(s) 1140
XmiI GTMKAC 4 cut(s) 96, 1220, 1470, 1809
XmnI GAANNNNTTC 2 cut(s) 1237, 1734
ZraI GACGTC 2 cut(s) 616, 1218
ZrmI AGTACT 2 cut(s) 798, 1885
Zsp2I ATGCAT 1 cut(s) 992
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.