AT3G57640
NAC Family

Inactive serine threonine-protein kinase At1g67470-like

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
21344708 .. 21346235
1528 bp
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UTR
Exon/CDS
Intron
AT3G57640.1

Sequence Viewer

Length: 1071 bp
ATGGAGTGGTGGAAGAAGAAGAGTTTACGAGCCATAATTAAAAGGGAGAGATTGGTCCGAGGACACGAGAGAGGTGGGACATTGCTAGAAGAGATCATCAAATCTTGCAATGGCAAAGCAAATCCCATCAAAATATTCTCCGCTGATCAAATCCTAGAAGCCACCGACACTTTCAGCGAATCCAATCGTGTTTCTGAACTATTCGATGAGATTCCATACGATTGGTATTATTCAGGTAAAAACAATAACCATCATCATCATCATAAACTGTTACTCATCAAGAAATGGAGATATAGATTTAGTGAGCATAACGGAGGAAACTTTTGCCGTGACATAGCCATCTCATCGATTGTTAGTGGTCATAAAAACTTCATGCAATTGGTTGGATGTTGTCTTGAATCTGAACATCCAGTTTTGGTTTATCGTGCATCAAAGAAACCTACTAGTTTAGATCTGAAAATGGTTGTGTCATGGAGACAAAGATTGAAAATAGCAGAGGAGATTGCAACTGCTTTAGCTTATCTTCACACTGCGTTTCCAAGACCTTTCGTATATAGGATTCTGCGTTTAGAAGATATCTTATTGGATGATGAAGATGGTGTTGCTAAGTTGTGTAACTTCTCCTACTGTGTCTCTATTCCACAAGGAGAAACATTTGTGAAGCTTGGTAATGGTTGTATAGGTGGAGATTATGATTACATGGATGATAATTATTTGATTAATGGTATTGTCTCGGAGAAAACTGATGCGTTTGGATTTGGTATTTTTATGCAAAAGCTTCTGATGGGAGAAGAGAGATTTCATGAGCTTTGTTATGATCGGAGTGACTTGACAACTTTTGAAAACAGAAGAAAGTTTGCAAAATGCATTGATGAGATTGTCGATTCAAACATGTTAGAGAAAATAGGTGATGTTACAGAAGAAGAGCGTTGTCGAATGGAAGCTTTCATTGTCCTCTCGGAAAGATGCATTGGTCTTAGAGGGGAAGTTCCAAAAATGGTTGAAGTTGCCAAAGAACTAAAAAGATTCCTTAGAGATTCTTCTTCTTCTTGTGGTGAAACAAGTTTATAG

Protein Analysis

356

Amino Acids

41.13

Weight (kDa)

6.44

Isoelectric Point (pI)

33.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 79 - 274 2.7e-12 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 84 - 275 2.8e-13 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0021944)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G65190 AT1G65250 AT1G67470 AT3G57640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 141
AflIII ACRYGT 1 cut(s) 891
AgsI TTSAA 5 cut(s) 398, 487, 842, 888, 1004
AhlI ACTAGT 1 cut(s) 443
AjuI GAANNNNNNNTTGG 2 cut(s) 954, 986
AluBI AGCT 5 cut(s) 518, 664, 778, 808, 944
AluI AGCT 5 cut(s) 518, 664, 778, 808, 944
Alw26I GTCTC 3 cut(s) 469, 637, 736
AseI ATTAAT 1 cut(s) 720
AspS9I GGNCC 1 cut(s) 55
AsuHPI GGTGA 2 cut(s) 920, 1067
AvaII GGWCC 1 cut(s) 55
BauI CACGAG 1 cut(s) 65
BccI CCATC 5 cut(s) 134, 258, 347, 590, 778
BceAI ACGGC 1 cut(s) 312
BclI TGATCA 1 cut(s) 145
BcoDI GTCTC 3 cut(s) 469, 637, 736
BcuI ACTAGT 1 cut(s) 443
BfaI CTAG 3 cut(s) 86, 155, 444
BglII AGATCT 1 cut(s) 451
Bme18I GGWCC 1 cut(s) 55
BmgT120I GGNCC 1 cut(s) 55
BmsI GCATC 3 cut(s) 437, 736, 956
Bsa29I ATCGAT 1 cut(s) 347
BsaJI CCNNGG 1 cut(s) 58
Bse1I ACTGG 1 cut(s) 410
Bse3DI GCAATG 2 cut(s) 80, 115
BseCI ATCGAT 1 cut(s) 347
BseDI CCNNGG 1 cut(s) 58
BseGI GGATG 4 cut(s) 392, 406, 592, 709
BseMI GCAATG 2 cut(s) 80, 115
BseNI ACTGG 1 cut(s) 410
BseRI GAGGAG 1 cut(s) 512
BshVI ATCGAT 1 cut(s) 347
BslFI GGGAC 1 cut(s) 91
BsmAI GTCTC 3 cut(s) 469, 637, 736
BsmFI GGGAC 1 cut(s) 91
Bsp143I GATC 4 cut(s) 93, 145, 451, 817
BspACI CCGC 1 cut(s) 141
BspDI ATCGAT 1 cut(s) 347
BspHI TCATGA 1 cut(s) 802
BspQI GCTCTTC 1 cut(s) 918
BsrDI GCAATG 2 cut(s) 80, 115
BsrI ACTGG 1 cut(s) 410
BssECI CCNNGG 1 cut(s) 58
BssMI GATC 4 cut(s) 93, 145, 451, 817
BssSI CACGAG 1 cut(s) 65
Bst2BI CACGAG 1 cut(s) 65
Bst4CI ACNGT 2 cut(s) 270, 629
Bst6I CTCTTC 4 cut(s) 14, 84, 786, 918
BstDEI CTNAG 3 cut(s) 606, 977, 1031
BstF5I GGATG 4 cut(s) 392, 406, 592, 709
BstKTI GATC 4 cut(s) 96, 148, 454, 820
BstMAI GTCTC 3 cut(s) 469, 637, 736
BstMBI GATC 4 cut(s) 93, 145, 451, 817
BstNSI RCATGY 1 cut(s) 895
BstX2I RGATCY 1 cut(s) 451
BstXI CCANNNNNNTGG 1 cut(s) 222
BstYI RGATCY 1 cut(s) 451
Bsu15I ATCGAT 1 cut(s) 347
BsuTUI ATCGAT 1 cut(s) 347
BtsCI GGATG 4 cut(s) 392, 406, 592, 709
BtsI GCAGTG 1 cut(s) 528
BtsIMutI CAGTG 1 cut(s) 528
CciI TCATGA 1 cut(s) 802
Cfr13I GGNCC 1 cut(s) 55
ClaI ATCGAT 1 cut(s) 347
CviAII CATG 5 cut(s) 373, 471, 700, 803, 892
CviJI RGCY 8 cut(s) 32, 161, 338, 518, 664, 778, 808, 944
CviKI_1 RGCY 8 cut(s) 32, 161, 338, 518, 664, 778, 808, 944
DdeI CTNAG 3 cut(s) 606, 977, 1031
DpnI GATC 4 cut(s) 95, 147, 453, 819
DpnII GATC 4 cut(s) 93, 145, 451, 817
Eam1104I CTCTTC 4 cut(s) 14, 84, 786, 918
EarI CTCTTC 4 cut(s) 14, 84, 786, 918
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 1 cut(s) 55
EcoRV GATATC 1 cut(s) 577
EcoT22I ATGCAT 2 cut(s) 869, 971
FaeI CATG 5 cut(s) 376, 474, 703, 806, 895
FaqI GGGAC 1 cut(s) 91
FatI CATG 5 cut(s) 372, 470, 699, 802, 891
FbaI TGATCA 1 cut(s) 145
FokI GGATG 4 cut(s) 393, 399, 599, 716
FspBI CTAG 3 cut(s) 86, 155, 444
Hin1II CATG 5 cut(s) 376, 474, 703, 806, 895
HindIII AAGCTT 3 cut(s) 662, 776, 942
HinfI GANTC 7 cut(s) 179, 211, 398, 559, 884, 1026, 1037
HphI GGTGA 2 cut(s) 920, 1067
Hpy166II GTNNAC 1 cut(s) 26
Hpy188I TCNGA 8 cut(s) 59, 196, 403, 456, 736, 783, 822, 961
Hpy188III TCNNGA 3 cut(s) 280, 395, 803
Hpy8I GTNNAC 1 cut(s) 26
HpyCH4III ACNGT 2 cut(s) 270, 629
HpyCH4V TGCA 8 cut(s) 108, 376, 428, 506, 772, 860, 867, 969
HpyF3I CTNAG 3 cut(s) 606, 977, 1031
Hsp92II CATG 5 cut(s) 376, 474, 703, 806, 895
Ksp22I TGATCA 1 cut(s) 145
Kzo9I GATC 4 cut(s) 93, 145, 451, 817
LguI GCTCTTC 1 cut(s) 918
LpnPI CCDG 2 cut(s) 219, 423
LweI GCATC 3 cut(s) 437, 736, 956
MaeI CTAG 3 cut(s) 86, 155, 444
MaeIII GTNAC 5 cut(s) 270, 329, 614, 824, 913
MalI GATC 4 cut(s) 95, 147, 453, 819
MboI GATC 4 cut(s) 93, 145, 451, 817
MfeI CAATTG 1 cut(s) 377
MflI RGATCY 1 cut(s) 451
MluCI AATT 3 cut(s) 36, 377, 709
MmeI TCCRAC 1 cut(s) 364
MnlI CCTC 6 cut(s) 53, 65, 308, 490, 965, 974
Mph1103I ATGCAT 2 cut(s) 869, 971
MseI TTAA 2 cut(s) 39, 720
MspA1I CMGCKG 1 cut(s) 143
MunI CAATTG 1 cut(s) 377
NdeII GATC 4 cut(s) 93, 145, 451, 817
NlaIII CATG 5 cut(s) 376, 474, 703, 806, 895
NmuCI GTSAC 2 cut(s) 329, 824
NsiI ATGCAT 2 cut(s) 869, 971
NspI RCATGY 1 cut(s) 895
PagI TCATGA 1 cut(s) 802
PciI ACATGT 1 cut(s) 891
PciSI GCTCTTC 1 cut(s) 918
PfeI GAWTC 7 cut(s) 179, 211, 398, 559, 884, 1026, 1037
PscI ACATGT 1 cut(s) 891
PshBI ATTAAT 1 cut(s) 720
PspPI GGNCC 1 cut(s) 55
PsuI RGATCY 1 cut(s) 451
SapI GCTCTTC 1 cut(s) 918
SaqAI TTAA 2 cut(s) 39, 720
Sau3AI GATC 4 cut(s) 93, 145, 451, 817
Sau96I GGNCC 1 cut(s) 55
SfaNI GCATC 3 cut(s) 437, 736, 956
SinI GGWCC 1 cut(s) 55
SpeI ACTAGT 1 cut(s) 443
Sse9I AATT 3 cut(s) 36, 377, 709
SsiI CCGC 1 cut(s) 141
SspI AATATT 1 cut(s) 135
SspMI CTAG 3 cut(s) 86, 155, 444
TaaI ACNGT 2 cut(s) 270, 629
TaqI TCGA 4 cut(s) 204, 347, 882, 934
TasI AATT 3 cut(s) 36, 377, 709
TfiI GAWTC 7 cut(s) 179, 211, 398, 559, 884, 1026, 1037
Tru1I TTAA 2 cut(s) 39, 720
Tru9I TTAA 2 cut(s) 39, 720
TscAI CASTG 1 cut(s) 535
TseFI GTSAC 2 cut(s) 329, 824
Tsp45I GTSAC 2 cut(s) 329, 824
TspDTI ATGAA 4 cut(s) 361, 606, 791, 937
TspGWI ACGGA 1 cut(s) 327
TspRI CASTG 1 cut(s) 535
VpaK11BI GGWCC 1 cut(s) 55
VspI ATTAAT 1 cut(s) 720
XceI RCATGY 1 cut(s) 895
XspI CTAG 3 cut(s) 86, 155, 444
Zsp2I ATGCAT 2 cut(s) 869, 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.