AT3G62660

Galacturonosyltransferase-like 7

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
23172754 .. 23174993
2240 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G62660.1

Sequence Viewer

Length: 1086 bp
ATGCTTTGGATCATGAGATTCTCCGGTTTATTCTCCGCCGCTTTGGTTATCATCGTCCTCTCTCCTTCTCTCCAATCGTTTCCTCCAGCTGAAGCTATCAGATCCTCTCATCTCGACGCTTACCTCCGTTTCCCCTCCTCCGATCCACCGCCGCATAGATTCTCCTTCAGAAAAGCTCCTGTTTTCCGCAATGCCGCCGATTGCGCCGCCGCAGATATCGATTCCGGCGTCTGTAACCCTTCCTTGGTCCACGTCGCGATTACTCTCGATTTCGAGTACCTGCGTGGCTCAATCGCCGCCGTTCATTCGATTCTCAAGCACTCGTCGTGTCCCGAGAGCGTCTTCTTCCATTTCCTCGTCTCCGAGACTGACCTAGAATCCTTGATTCGTTCGACTTTTCCCGAATTGAAATTAAAGGTTTACTACTTCGATCCGGAGATTGTACGGACGCTGATCTCAACCTCCGTGAGACAAGCGCTCGAGCAGCCGTTGAATTACGCTAGAAATTACCTAGCTGACCTTCTCGAGCCTTGCGTGCGTCGCGTGATCTACCTAGATTCCGATCTAATCGTCGTCGACGACATCGCAAAGCTCTGGATGACGAAACTGGGATCGAAAACGATCGGAGCTCCCGAGTACTGTCACGCGAACTTCACAAAGTATTTCACACCGGCGTTCTGGTCCGACGAGAGGTTCTCCGGAGCTTTCTCCGGGAGGAAACCGTGCTACTTCAACACGGGAGTGATGGTGATGGATCTAGAGAGATGGAGGCGCGTAGGGTACACGGAGGTGATAGAGAAATGGATGGAGATTCAGAAGAGTGATAGGATTTACGAGCTGGGATCATTGCCGCCGTTCTTGTTGGTGTTCGCCGGAGAAGTAGCTCCGATAGAGCATCGGTGGAACCAGCATGGGCTTGGTGGAGATAACGTGAGAGGAAGCTGTAGAGATTTACATCCCGGTCCGGTTAGCTTGCTTCATTGGTCCGGTAGTGGTAAACCGTGGTTTCGGTTAGATTCGAGACGGCCTTGTCCACTTGATACTCTTTGGGCACCTTATGATTTGTATGGACACTACTCTCGCTGA

Protein Analysis

361

Amino Acids

41.12

Weight (kDa)

6.86

Isoelectric Point (pI)

51.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 84 - 337 1.1e-61 Glycosyl transferase family 8
Glyco_transf_24 PF18404 122 - 265 3e-06 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62660 AT4G02130 AT4G02130 AT4G02130
prunus_persica Prupe.8G268500_v2.0.a1 Prupe.8G268500_v2.0.a1
pyrus_communis pycom11g27730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1029
Acc36I ACCTGC 1 cut(s) 288
AccB1I GGYRCC 1 cut(s) 1051
AccI GTMKAC 1 cut(s) 576
AccII CGCG 4 cut(s) 257, 543, 647, 774
AccIII TCCGGA 2 cut(s) 433, 698
AclWI GGATC 7 cut(s) 17, 96, 137, 425, 619, 762, 850
AcuI CTGAAG 2 cut(s) 111, 151
AcyI GRCGYC 1 cut(s) 228
AfaI GTAC 4 cut(s) 278, 444, 638, 782
AfeI AGCGCT 1 cut(s) 477
AfiI CCNNNNNNNGG 2 cut(s) 244, 690
AgsI TTSAA 3 cut(s) 409, 493, 733
AjiI CACGTC 1 cut(s) 253
AleI CACNNNNGTG 2 cut(s) 740, 788
Alw21I GWGCWC 1 cut(s) 631
Alw26I GTCTC 4 cut(s) 359, 364, 463, 1015
AlwI GGATC 7 cut(s) 17, 96, 137, 425, 619, 762, 850
Ama87I CYCGRG 4 cut(s) 332, 479, 524, 632
Aor13HI TCCGGA 2 cut(s) 433, 698
Aor51HI AGCGCT 1 cut(s) 477
AoxI GGCC 1 cut(s) 1025
ApeKI GCWGC 1 cut(s) 484
AspLEI GCGC 3 cut(s) 206, 478, 774
AspS9I GGNCC 4 cut(s) 247, 681, 962, 984
AsuC2I CCSGG 2 cut(s) 712, 960
AsuHPI GGTGA 2 cut(s) 760, 802
AvaI CYCGRG 4 cut(s) 332, 479, 524, 632
AvaII GGWCC 4 cut(s) 247, 681, 962, 984
BaeGI GKGCMC 1 cut(s) 1054
BanI GGYRCC 1 cut(s) 1051
BanII GRGCYC 1 cut(s) 631
BbsI GAAGAC 1 cut(s) 334
Bbv12I GWGCWC 1 cut(s) 631
BbvI GCAGC 1 cut(s) 496
BccI CCATC 4 cut(s) 739, 745, 759, 799
BceAI ACGGC 4 cut(s) 284, 472, 838, 1040
BcnI CCSGG 2 cut(s) 712, 960
BcoDI GTCTC 4 cut(s) 359, 364, 463, 1015
BfaI CTAG 5 cut(s) 374, 501, 512, 554, 758
BfmI CTRYAG 1 cut(s) 943
BfoI RGCGCY 1 cut(s) 479
BfuAI ACCTGC 1 cut(s) 288
BisI GCNGC 8 cut(s) 39, 152, 195, 207, 210, 297, 485, 851
BlsI GCNGC 8 cut(s) 40, 153, 196, 208, 211, 298, 486, 852
BmcAI AGTACT 1 cut(s) 638
Bme1390I CCNGG 2 cut(s) 712, 960
Bme18I GGWCC 4 cut(s) 247, 681, 962, 984
BmeT110I CYCGRG 4 cut(s) 332, 479, 524, 632
BmgBI CACGTC 1 cut(s) 253
BmgT120I GGNCC 4 cut(s) 247, 681, 962, 984
BmiI GGNNCC 2 cut(s) 905, 1053
BmrFI CCNGG 2 cut(s) 712, 960
BmrI ACTGGG 1 cut(s) 617
BmsI GCATC 1 cut(s) 904
BmuI ACTGGG 1 cut(s) 617
BpiI GAAGAC 1 cut(s) 334
BplI GAGNNNNNCTC 2 cut(s) 680, 712
BpmI CTGGAG 1 cut(s) 69
BpuEI CTTGAG 1 cut(s) 299
BpuMI CCSGG 2 cut(s) 712, 960
Bsa29I ATCGAT 1 cut(s) 219
BsaBI GATNNNNATC 2 cut(s) 561, 954
BsaHI GRCGYC 1 cut(s) 228
BsaJI CCNNGG 2 cut(s) 243, 1001
BsaWI WCCGGW 5 cut(s) 23, 433, 698, 964, 986
BsaXI ACNNNNNCTCC 4 cut(s) 732, 762, 915, 945
Bsc4I CCNNNNNNNGG 2 cut(s) 244, 690
Bse118I RCCGGY 1 cut(s) 670
Bse1I ACTGG 1 cut(s) 612
Bse3DI GCAATG 2 cut(s) 196, 845
Bse8I GATNNNNATC 2 cut(s) 561, 954
BseAI TCCGGA 2 cut(s) 433, 698
BseCI ATCGAT 1 cut(s) 219
BseDI CCNNGG 2 cut(s) 243, 1001
BseGI GGATG 3 cut(s) 603, 810, 955
BseJI GATNNNNATC 2 cut(s) 561, 954
BseLI CCNNNNNNNGG 2 cut(s) 244, 690
BseMI GCAATG 2 cut(s) 196, 845
BseNI ACTGG 1 cut(s) 612
BseRI GAGGAG 1 cut(s) 127
BseSI GKGCMC 1 cut(s) 1054
BseXI GCAGC 1 cut(s) 496
BseYI CCCAGC 1 cut(s) 838
Bsh1236I CGCG 4 cut(s) 257, 543, 647, 774
Bsh1285I CGRYCG 1 cut(s) 624
BshFI GGCC 1 cut(s) 1027
BshNI GGYRCC 1 cut(s) 1051
BshVI ATCGAT 1 cut(s) 219
BsiEI CGRYCG 1 cut(s) 624
BsiHKAI GWGCWC 1 cut(s) 631
BsiHKCI CYCGRG 4 cut(s) 332, 479, 524, 632
BslFI GGGAC 1 cut(s) 315
BslI CCNNNNNNNGG 2 cut(s) 244, 690
BsmAI GTCTC 4 cut(s) 359, 364, 463, 1015
BsmBI CGTCTC 2 cut(s) 364, 1015
BsmFI GGGAC 1 cut(s) 315
BsnI GGCC 1 cut(s) 1027
BsoBI CYCGRG 4 cut(s) 332, 479, 524, 632
Bsp1286I GDGCHC 2 cut(s) 631, 1054
Bsp13I TCCGGA 2 cut(s) 433, 698
Bsp68I TCGCGA 1 cut(s) 257
BspANI GGCC 1 cut(s) 1027
BspDI ATCGAT 1 cut(s) 219
BspEI TCCGGA 2 cut(s) 433, 698
BspFNI CGCG 4 cut(s) 257, 543, 647, 774
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 2 cut(s) 905, 1053
BspMI ACCTGC 1 cut(s) 288
BspPI GGATC 7 cut(s) 17, 96, 137, 425, 619, 762, 850
BspT107I GGYRCC 1 cut(s) 1051
BsrDI GCAATG 2 cut(s) 196, 845
BsrFI RCCGGY 1 cut(s) 670
BsrI ACTGG 1 cut(s) 612
BssAI RCCGGY 1 cut(s) 670
BssECI CCNNGG 2 cut(s) 243, 1001
BssNI GRCGYC 1 cut(s) 228
BssT1I CCWWGG 1 cut(s) 243
Bst4CI ACNGT 3 cut(s) 641, 723, 1002
Bst6I CTCTTC 1 cut(s) 812
BstACI GRCGYC 1 cut(s) 228
BstC8I GCNNGC 2 cut(s) 536, 974
BstDSI CCRYGG 1 cut(s) 1001
BstF5I GGATG 3 cut(s) 603, 810, 955
BstFNI CGCG 4 cut(s) 257, 543, 647, 774
BstH2I RGCGCY 1 cut(s) 479
BstHHI GCGC 3 cut(s) 206, 478, 774
BstMAI GTCTC 4 cut(s) 359, 364, 463, 1015
BstMCI CGRYCG 1 cut(s) 624
BstMWI GCNNNNNNNGC 4 cut(s) 203, 484, 535, 540
BstSCI CCNGG 2 cut(s) 710, 958
BstSFI CTRYAG 1 cut(s) 943
BstSLI GKGCMC 1 cut(s) 1054
BstUI CGCG 4 cut(s) 257, 543, 647, 774
BstV1I GCAGC 1 cut(s) 496
BstV2I GAAGAC 1 cut(s) 334
BstX2I RGATCY 2 cut(s) 101, 754
BstYI RGATCY 2 cut(s) 101, 754
Bsu15I ATCGAT 1 cut(s) 219
BsuRI GGCC 1 cut(s) 1027
BsuTUI ATCGAT 1 cut(s) 219
BtgI CCRYGG 1 cut(s) 1001
BtgZI GCGATG 1 cut(s) 568
BtrI CACGTC 1 cut(s) 253
BtsCI GGATG 3 cut(s) 603, 810, 955
BtuMI TCGCGA 1 cut(s) 257
BveI ACCTGC 1 cut(s) 288
Cac8I GCNNGC 2 cut(s) 536, 974
CciI TCATGA 1 cut(s) 12
CfoI GCGC 3 cut(s) 206, 478, 774
Cfr10I RCCGGY 1 cut(s) 670
Cfr13I GGNCC 4 cut(s) 247, 681, 962, 984
ClaI ATCGAT 1 cut(s) 219
CpoI CGGWCCG 1 cut(s) 962
CseI GACGC 5 cut(s) 125, 217, 328, 457, 527
Csp6I GTAC 4 cut(s) 277, 443, 637, 781
CspI CGGWCCG 1 cut(s) 962
CviAII CATG 2 cut(s) 13, 911
CviQI GTAC 4 cut(s) 277, 443, 637, 781
DrdI GACNNNNNNGTC 1 cut(s) 1029
DseDI GACNNNNNNGTC 1 cut(s) 1029
Eam1104I CTCTTC 1 cut(s) 812
EarI CTCTTC 1 cut(s) 812
EciI GGCGGA 1 cut(s) 25
Ecl136II GAGCTC 1 cut(s) 629
Eco130I CCWWGG 1 cut(s) 243
Eco24I GRGCYC 1 cut(s) 631
Eco32I GATATC 1 cut(s) 217
Eco47I GGWCC 4 cut(s) 247, 681, 962, 984
Eco47III AGCGCT 1 cut(s) 477
Eco53kI GAGCTC 1 cut(s) 629
Eco57I CTGAAG 2 cut(s) 111, 151
Eco88I CYCGRG 4 cut(s) 332, 479, 524, 632
EcoICRI GAGCTC 1 cut(s) 629
EcoRV GATATC 1 cut(s) 217
EcoT14I CCWWGG 1 cut(s) 243
EcoT38I GRGCYC 1 cut(s) 631
ErhI CCWWGG 1 cut(s) 243
Esp3I CGTCTC 2 cut(s) 364, 1015
FaeI CATG 2 cut(s) 16, 914
FaiI YATR 5 cut(s) 14, 156, 912, 1059, 1068
FaqI GGGAC 1 cut(s) 315
FatI CATG 2 cut(s) 12, 910
FblI GTMKAC 1 cut(s) 576
Fnu4HI GCNGC 8 cut(s) 39, 152, 195, 207, 210, 297, 485, 851
FokI GGATG 3 cut(s) 610, 817, 942
FriOI GRGCYC 1 cut(s) 631
Fsp4HI GCNGC 8 cut(s) 39, 152, 195, 207, 210, 297, 485, 851
FspBI CTAG 5 cut(s) 374, 501, 512, 554, 758
GlaI GCGC 3 cut(s) 205, 477, 773
GluI GCNGC 8 cut(s) 39, 152, 195, 207, 210, 297, 485, 851
GsaI CCCAGC 1 cut(s) 842
GsuI CTGGAG 1 cut(s) 69
HaeII RGCGCY 1 cut(s) 479
HaeIII GGCC 1 cut(s) 1027
HgaI GACGC 5 cut(s) 125, 217, 328, 457, 527
HhaI GCGC 3 cut(s) 206, 478, 774
Hin1I GRCGYC 1 cut(s) 228
Hin1II CATG 2 cut(s) 16, 914
Hin6I GCGC 3 cut(s) 204, 476, 772
HinP1I GCGC 3 cut(s) 204, 476, 772
HincII GTYRAC 1 cut(s) 577
HindII GTYRAC 1 cut(s) 577
HinfI GANTC 9 cut(s) 18, 159, 221, 310, 377, 385, 557, 811, 1016
HphI GGTGA 2 cut(s) 760, 802
Hpy166II GTNNAC 6 cut(s) 250, 421, 577, 783, 998, 1034
Hpy188I TCNGA 9 cut(s) 101, 142, 170, 364, 562, 626, 685, 816, 888
Hpy8I GTNNAC 6 cut(s) 250, 421, 577, 783, 998, 1034
Hpy99I CGWCG 8 cut(s) 119, 257, 328, 543, 575, 578, 581, 689
HpyAV CCTTC 4 cut(s) 75, 175, 249, 530
HpyCH4III ACNGT 3 cut(s) 641, 723, 1002
HpyCH4IV ACGT 2 cut(s) 252, 930
HpyF10VI GCNNNNNNNGC 4 cut(s) 203, 484, 535, 540
HpySE526I ACGT 2 cut(s) 252, 930
Hsp92I GRCGYC 1 cut(s) 228
Hsp92II CATG 2 cut(s) 16, 914
HspAI GCGC 3 cut(s) 204, 476, 772
Kpn2I TCCGGA 2 cut(s) 433, 698
LmnI GCTCC 5 cut(s) 181, 626, 634, 701, 889
Lsp1109I GCAGC 1 cut(s) 496
LweI GCATC 1 cut(s) 904
MaeI CTAG 5 cut(s) 374, 501, 512, 554, 758
MaeII ACGT 2 cut(s) 252, 930
MaeIII GTNAC 2 cut(s) 233, 641
MboII GAAGA 3 cut(s) 334, 337, 829
MflI RGATCY 2 cut(s) 101, 754
MhlI GDGCHC 2 cut(s) 631, 1054
MluCI AATT 4 cut(s) 404, 410, 493, 505
MmeI TCCRAC 1 cut(s) 708
MroI TCCGGA 2 cut(s) 433, 698
MseI TTAA 1 cut(s) 413
MslI CAYNNNNRTG 2 cut(s) 740, 788
MspA1I CMGCKG 1 cut(s) 89
MspR9I CCNGG 2 cut(s) 712, 960
MvnI CGCG 4 cut(s) 257, 543, 647, 774
MwoI GCNNNNNNNGC 4 cut(s) 203, 484, 535, 540
NciI CCSGG 2 cut(s) 712, 960
NlaIII CATG 2 cut(s) 16, 914
NlaIV GGNNCC 2 cut(s) 905, 1053
NmuCI GTSAC 1 cut(s) 641
NruI TCGCGA 1 cut(s) 257
OliI CACNNNNGTG 2 cut(s) 740, 788
PaeR7I CTCGAG 2 cut(s) 479, 524
PagI TCATGA 1 cut(s) 12
PcsI WCGNNNNNNNCGW 4 cut(s) 225, 531, 576, 630
PfeI GAWTC 9 cut(s) 18, 159, 221, 310, 377, 385, 557, 811, 1016
PfoI TCCNGGA 1 cut(s) 710
PkrI GCNGC 8 cut(s) 40, 153, 196, 208, 211, 298, 486, 852
Ple19I CGATCG 1 cut(s) 624
Psp124BI GAGCTC 1 cut(s) 631
PspFI CCCAGC 1 cut(s) 838
PspN4I GGNNCC 2 cut(s) 905, 1053
PspPI GGNCC 4 cut(s) 247, 681, 962, 984
PspXI VCTCGAGB 1 cut(s) 479
PsuI RGATCY 2 cut(s) 101, 754
PvuI CGATCG 1 cut(s) 624
PvuII CAGCTG 1 cut(s) 89
RruI TCGCGA 1 cut(s) 257
RsaI GTAC 4 cut(s) 278, 444, 638, 782
RsaNI GTAC 4 cut(s) 277, 443, 637, 781
RseI CAYNNNNRTG 2 cut(s) 740, 788
Rsr2I CGGWCCG 1 cut(s) 962
RsrII CGGWCCG 1 cut(s) 962
SacI GAGCTC 1 cut(s) 631
SalI GTCGAC 1 cut(s) 575
SaqAI TTAA 1 cut(s) 413
SatI GCNGC 8 cut(s) 39, 152, 195, 207, 210, 297, 485, 851
Sau96I GGNCC 4 cut(s) 247, 681, 962, 984
ScaI AGTACT 1 cut(s) 638
ScrFI CCNGG 2 cut(s) 712, 960
SduI GDGCHC 2 cut(s) 631, 1054
SfaNI GCATC 1 cut(s) 904
SfcI CTRYAG 1 cut(s) 943
Sfr274I CTCGAG 2 cut(s) 479, 524
SgrAI CRCCGGYG 1 cut(s) 670
SgrDI CGTCGACG 1 cut(s) 575
SinI GGWCC 4 cut(s) 247, 681, 962, 984
SlaI CTCGAG 2 cut(s) 479, 524
SmiMI CAYNNNNRTG 2 cut(s) 740, 788
SmlI CTYRAG 3 cut(s) 314, 479, 524
SmoI CTYRAG 3 cut(s) 314, 479, 524
Sse9I AATT 4 cut(s) 404, 410, 493, 505
SspMI CTAG 5 cut(s) 374, 501, 512, 554, 758
SstI GAGCTC 1 cut(s) 631
StyD4I CCNGG 2 cut(s) 710, 958
StyI CCWWGG 1 cut(s) 243
TaaI ACNGT 3 cut(s) 641, 723, 1002
TaiI ACGT 2 cut(s) 255, 933
TasI AATT 4 cut(s) 404, 410, 493, 505
TatI WGTACW 1 cut(s) 636
TauI GCSGC 7 cut(s) 41, 154, 197, 209, 212, 299, 853
TfiI GAWTC 9 cut(s) 18, 159, 221, 310, 377, 385, 557, 811, 1016
Tru1I TTAA 1 cut(s) 413
Tru9I TTAA 1 cut(s) 413
TseFI GTSAC 1 cut(s) 641
TseI GCWGC 1 cut(s) 484
Tsp45I GTSAC 1 cut(s) 641
TspDTI ATGAA 2 cut(s) 293, 968
TspGWI ACGGA 4 cut(s) 116, 454, 460, 800
VpaK11BI GGWCC 4 cut(s) 247, 681, 962, 984
XbaI TCTAGA 1 cut(s) 757
XcmI CCANNNNNNNNNTGG 1 cut(s) 914
XhoI CTCGAG 2 cut(s) 479, 524
XmiI GTMKAC 1 cut(s) 576
XspI CTAG 5 cut(s) 374, 501, 512, 554, 758
ZrmI AGTACT 1 cut(s) 638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.