AT4G02130

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
944324 .. 947249
2926 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G02130.2

Sequence Viewer

Length: 1041 bp
ATGCTTTGGATAACGAGATTTGCTGGATTATTCTCCGCCGCGATGGCAGTGATCGTGTTATCTCCGTCGCTTCAGTCATTTCCTCCGGCGGCGGCAATCCGTTCTTCTCCATCACCGATCTTCAGAAAAGCTCCAGCGGTGTTCAACAACGGCGACGAATGTCTCTCCTCCGGCGGCGTCTGCAATCCGTCGTTGGTCCACGTGGCGATCACGTTAGACGTAGAGTACCTGCGTGGCTCAATCGCAGCCGTTAACTCGATCCTTCAGCACTCGGTGTGTCCAGAGAGCGTCTTCTTCCACTTCATCGCCGTCTCCGAGGAAACAAACCTGTTGGAGTCGCTGGTGAGATCGGTTTTCCCGAGACTGAAATTCAATATTTACGATTTTGCCCCTGAGACAGTTCGTGGTTTGATTTCTTCTTCCGTGAGACAAGCTCTCGAGCAGCCTCTGAACTACGCTAGAAGCTACTTAGCGGATCTGCTGGAGCCTTGTGTTAACCGTGTCATATACTTGGATTCGGATCTTGTCGTCGTCGATGACATCGCTAAGCTTTGGAAAACTAGCCTAGGCTCGAGGATAATCGGAGCTCCGGAGTATTGTCACGCGAATTTCACGAAATACTTCACCGGAGGATTCTGGTCGGAGGAGAGATTCTCCGGTACCTTTAGAGGGAGGAAGCCATGTTACTTCAACACAGGTGTGATGGTGATAGATCTTAAGAAATGGAGAAGAGGTGGTTACACGAAACGTATCGAGAAATGGATGGAGATTCAGAGAAGAGAGAGGATTTACGAACTAGGCTCGCTTCCACCGTTTCTTCTAGTTTTCTCCGGTCACGTGGCTCCCATCTCTCACCGGTGGAACCAGCATGGACTTGGTGGTGACAATGTTAGAGGTAGCTGTCGTGATTTGCATCCTGGTCCTGTGAGTTTGCTGCATTGGTCTGGTAGTGGCAAGCCCTGGATAAGACTCGATTCCAAACGGCCTTGTCCCTTAGACGCATTATGGACGCCTTACGACTTGTATCGACATTCGCATTGA

Protein Analysis

346

Amino Acids

38.96

Weight (kDa)

9.08

Isoelectric Point (pI)

55.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 67 - 323 4.7e-57 Glycosyl transferase family 8
Glyco_transf_24 PF18404 157 - 247 2.2e-06 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019602)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62660 AT4G02130 AT4G02130 AT4G02130
prunus_persica Prupe.8G268500_v2.0.a1 Prupe.8G268500_v2.0.a1
pyrus_communis pycom11g27730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 237
Acc65I GGTACC 1 cut(s) 659
AccB1I GGYRCC 1 cut(s) 659
AccII CGCG 2 cut(s) 41, 605
AccIII TCCGGA 1 cut(s) 589
AciI CCGC 7 cut(s) 36, 39, 89, 92, 137, 174, 473
AclWI GGATC 3 cut(s) 253, 483, 528
AcsI RAATTY 2 cut(s) 368, 607
AcuI CTGAAG 3 cut(s) 56, 106, 248
AcvI CACGTG 2 cut(s) 202, 838
AcyI GRCGYC 2 cut(s) 177, 1010
AdeI CACNNNGTG 1 cut(s) 274
AfaI GTAC 2 cut(s) 227, 661
AfiI CCNNNNNNNGG 1 cut(s) 669
AflII CTTAAG 1 cut(s) 716
AgeI ACCGGT 1 cut(s) 855
AgsI TTSAA 3 cut(s) 145, 373, 691
AjnI CCWGG 2 cut(s) 916, 959
AleI CACNNNNGTG 1 cut(s) 698
AluBI AGCT 6 cut(s) 131, 434, 465, 550, 587, 900
AluI AGCT 6 cut(s) 131, 434, 465, 550, 587, 900
Alw21I GWGCWC 1 cut(s) 589
Alw26I GTCTC 5 cut(s) 167, 316, 355, 389, 421
AlwI GGATC 3 cut(s) 253, 483, 528
AlwNI CAGNNNCTG 1 cut(s) 448
Ama87I CYCGRG 3 cut(s) 358, 437, 571
Aor13HI TCCGGA 1 cut(s) 589
AoxI GGCC 1 cut(s) 983
ApeKI GCWGC 3 cut(s) 245, 442, 934
ApoI RAATTY 2 cut(s) 368, 607
AsiGI ACCGGT 1 cut(s) 855
Asp700I GAANNNNTTC 1 cut(s) 620
Asp718I GGTACC 1 cut(s) 659
AspA2I CCTAGG 1 cut(s) 565
AspS9I GGNCC 2 cut(s) 196, 920
AsuHPI GGTGA 6 cut(s) 105, 355, 616, 718, 845, 893
AvaI CYCGRG 3 cut(s) 358, 437, 571
AvaII GGWCC 2 cut(s) 196, 920
AvrII CCTAGG 1 cut(s) 565
BanI GGYRCC 1 cut(s) 659
BanII GRGCYC 1 cut(s) 589
BarI GAAGNNNNNNTAC 2 cut(s) 668, 700
BbrPI CACGTG 2 cut(s) 202, 838
BbsI GAAGAC 1 cut(s) 283
Bbv12I GWGCWC 1 cut(s) 589
BbvI GCAGC 3 cut(s) 257, 454, 921
BccI CCATC 5 cut(s) 37, 118, 697, 757, 854
BceAI ACGGC 4 cut(s) 166, 233, 293, 998
BciT130I CCWGG 2 cut(s) 918, 961
BcoDI GTCTC 5 cut(s) 167, 316, 355, 389, 421
BfaI CTAG 5 cut(s) 459, 561, 566, 797, 821
BfrI CTTAAG 1 cut(s) 716
BfuAI ACCTGC 1 cut(s) 237
BglI GCCNNNNNGGC 1 cut(s) 44
BglII AGATCT 1 cut(s) 712
BisI GCNGC 7 cut(s) 39, 90, 93, 175, 246, 443, 935
BlnI CCTAGG 1 cut(s) 565
BlpI GCTNAGC 1 cut(s) 546
BlsI GCNGC 7 cut(s) 40, 91, 94, 176, 247, 444, 936
Bme1390I CCNGG 2 cut(s) 918, 961
Bme18I GGWCC 2 cut(s) 196, 920
BmeT110I CYCGRG 3 cut(s) 358, 437, 571
BmgT120I GGNCC 2 cut(s) 196, 920
BmiI GGNNCC 4 cut(s) 486, 661, 843, 863
BmrFI CCNGG 2 cut(s) 918, 961
BmsI GCATC 1 cut(s) 922
BoxI GACNNNNGTC 1 cut(s) 159
BpiI GAAGAC 1 cut(s) 283
BplI GAGNNNNNCTC 4 cut(s) 418, 450, 638, 670
BpmI CTGGAG 2 cut(s) 117, 503
Bpu1102I GCTNAGC 1 cut(s) 546
BsaAI YACGTR 2 cut(s) 202, 838
BsaBI GATNNNNATC 2 cut(s) 519, 912
BsaHI GRCGYC 2 cut(s) 177, 1010
BsaJI CCNNGG 3 cut(s) 315, 565, 959
BsaWI WCCGGW 5 cut(s) 589, 626, 656, 830, 855
BsaXI ACNNNNNCTCC 2 cut(s) 718, 748
Bsc4I CCNNNNNNNGG 1 cut(s) 669
Bse118I RCCGGY 1 cut(s) 855
Bse8I GATNNNNATC 2 cut(s) 519, 912
BseAI TCCGGA 1 cut(s) 589
BseBI CCWGG 2 cut(s) 918, 961
BseDI CCNNGG 3 cut(s) 315, 565, 959
BseGI GGATG 2 cut(s) 768, 913
BseJI GATNNNNATC 2 cut(s) 519, 912
BseLI CCNNNNNNNGG 1 cut(s) 669
BseMII CTCAG 1 cut(s) 384
BseRI GAGGAG 2 cut(s) 157, 659
BseXI GCAGC 3 cut(s) 257, 454, 921
Bsh1236I CGCG 2 cut(s) 41, 605
BshFI GGCC 1 cut(s) 985
BshNI GGYRCC 1 cut(s) 659
BshTI ACCGGT 1 cut(s) 855
BsiHKAI GWGCWC 1 cut(s) 589
BsiHKCI CYCGRG 3 cut(s) 358, 437, 571
BsiSI CCGG 7 cut(s) 86, 171, 590, 627, 657, 831, 856
BslFI GGGAC 1 cut(s) 975
BslI CCNNNNNNNGG 1 cut(s) 669
BsmAI GTCTC 5 cut(s) 167, 316, 355, 389, 421
BsmBI CGTCTC 1 cut(s) 316
BsmFI GGGAC 1 cut(s) 975
BsnI GGCC 1 cut(s) 985
BsoBI CYCGRG 3 cut(s) 358, 437, 571
Bsp1286I GDGCHC 1 cut(s) 589
Bsp13I TCCGGA 1 cut(s) 589
Bsp143I GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
Bsp1720I GCTNAGC 1 cut(s) 546
BspACI CCGC 7 cut(s) 36, 39, 89, 92, 137, 174, 473
BspANI GGCC 1 cut(s) 985
BspCNI CTCAG 1 cut(s) 385
BspEI TCCGGA 1 cut(s) 589
BspFNI CGCG 2 cut(s) 41, 605
BspLI GGNNCC 4 cut(s) 486, 661, 843, 863
BspMI ACCTGC 1 cut(s) 237
BspPI GGATC 3 cut(s) 253, 483, 528
BspT107I GGYRCC 1 cut(s) 659
BspTI CTTAAG 1 cut(s) 716
BsrFI RCCGGY 1 cut(s) 855
BssAI RCCGGY 1 cut(s) 855
BssECI CCNNGG 3 cut(s) 315, 565, 959
BssMI GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
BssNI GRCGYC 2 cut(s) 177, 1010
BssT1I CCWWGG 1 cut(s) 565
Bst2UI CCWGG 2 cut(s) 918, 961
Bst4CI ACNGT 3 cut(s) 400, 500, 813
Bst6I CTCTTC 2 cut(s) 724, 772
BstACI GRCGYC 2 cut(s) 177, 1010
BstAFI CTTAAG 1 cut(s) 716
BstBAI YACGTR 2 cut(s) 202, 838
BstC8I GCNNGC 2 cut(s) 803, 956
BstDEI CTNAG 4 cut(s) 393, 469, 546, 994
BstF5I GGATG 2 cut(s) 768, 913
BstFNI CGCG 2 cut(s) 41, 605
BstKTI GATC 8 cut(s) 54, 120, 210, 261, 350, 478, 523, 715
BstMAI GTCTC 5 cut(s) 167, 316, 355, 389, 421
BstMBI GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
BstMWI GCNNNNNNNGC 2 cut(s) 44, 180
BstNI CCWGG 2 cut(s) 918, 961
BstPAI GACNNNNGTC 1 cut(s) 159
BstSCI CCNGG 2 cut(s) 916, 959
BstUI CGCG 2 cut(s) 41, 605
BstV1I GCAGC 3 cut(s) 257, 454, 921
BstV2I GAAGAC 1 cut(s) 283
BstX2I RGATCY 3 cut(s) 475, 520, 712
BstYI RGATCY 3 cut(s) 475, 520, 712
BsuRI GGCC 1 cut(s) 985
BtgZI GCGATG 3 cut(s) 56, 289, 526
BtsCI GGATG 2 cut(s) 768, 913
BtsI GCAGTG 1 cut(s) 54
BtsIMutI CAGTG 1 cut(s) 54
BveI ACCTGC 1 cut(s) 237
Cac8I GCNNGC 2 cut(s) 803, 956
CaiI CAGNNNCTG 1 cut(s) 448
Cfr10I RCCGGY 1 cut(s) 855
Cfr13I GGNCC 2 cut(s) 196, 920
CseI GACGC 4 cut(s) 166, 277, 1007, 1018
Csp6I GTAC 2 cut(s) 226, 660
CspAI ACCGGT 1 cut(s) 855
CviAII CATG 2 cut(s) 681, 869
CviQI GTAC 2 cut(s) 226, 660
DdeI CTNAG 4 cut(s) 393, 469, 546, 994
DpnI GATC 8 cut(s) 53, 119, 209, 260, 349, 477, 522, 714
DpnII GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
DraIII CACNNNGTG 1 cut(s) 274
Eam1104I CTCTTC 2 cut(s) 724, 772
EarI CTCTTC 2 cut(s) 724, 772
EciI GGCGGA 1 cut(s) 25
Ecl136II GAGCTC 1 cut(s) 587
Eco130I CCWWGG 1 cut(s) 565
Eco24I GRGCYC 1 cut(s) 589
Eco47I GGWCC 2 cut(s) 196, 920
Eco53kI GAGCTC 1 cut(s) 587
Eco57I CTGAAG 3 cut(s) 56, 106, 248
Eco72I CACGTG 2 cut(s) 202, 838
Eco88I CYCGRG 3 cut(s) 358, 437, 571
EcoICRI GAGCTC 1 cut(s) 587
EcoRII CCWGG 2 cut(s) 916, 959
EcoT14I CCWWGG 1 cut(s) 565
EcoT38I GRGCYC 1 cut(s) 589
ErhI CCWWGG 1 cut(s) 565
Esp3I CGTCTC 1 cut(s) 316
FaeI CATG 2 cut(s) 684, 872
FaiI YATR 5 cut(s) 506, 508, 682, 870, 1006
FaqI GGGAC 1 cut(s) 975
FatI CATG 2 cut(s) 680, 868
Fnu4HI GCNGC 7 cut(s) 39, 90, 93, 175, 246, 443, 935
FokI GGATG 2 cut(s) 775, 900
FriOI GRGCYC 1 cut(s) 589
Fsp4HI GCNGC 7 cut(s) 39, 90, 93, 175, 246, 443, 935
FspBI CTAG 5 cut(s) 459, 561, 566, 797, 821
GluI GCNGC 7 cut(s) 39, 90, 93, 175, 246, 443, 935
GsuI CTGGAG 2 cut(s) 117, 503
HaeIII GGCC 1 cut(s) 985
HapII CCGG 7 cut(s) 86, 171, 590, 627, 657, 831, 856
HgaI GACGC 4 cut(s) 166, 277, 1007, 1018
Hin1I GRCGYC 2 cut(s) 177, 1010
Hin1II CATG 2 cut(s) 684, 872
HincII GTYRAC 2 cut(s) 253, 496
HindII GTYRAC 2 cut(s) 253, 496
HindIII AAGCTT 1 cut(s) 548
HinfI GANTC 7 cut(s) 335, 515, 633, 651, 769, 969, 974
HpaI GTTAAC 2 cut(s) 253, 496
HpaII CCGG 7 cut(s) 86, 171, 590, 627, 657, 831, 856
HphI GGTGA 6 cut(s) 105, 355, 616, 718, 845, 893
Hpy166II GTNNAC 3 cut(s) 199, 253, 496
Hpy188I TCNGA 7 cut(s) 125, 316, 450, 520, 584, 643, 774
Hpy188III TCNNGA 7 cut(s) 281, 358, 437, 590, 613, 754, 905
Hpy8I GTNNAC 3 cut(s) 199, 253, 496
Hpy99I CGWCG 5 cut(s) 70, 158, 193, 533, 536
HpyAV CCTTC 1 cut(s) 272
HpyCH4III ACNGT 3 cut(s) 400, 500, 813
HpyCH4IV ACGT 5 cut(s) 201, 212, 219, 748, 837
HpyCH4V TGCA 3 cut(s) 183, 913, 937
HpyF10VI GCNNNNNNNGC 2 cut(s) 44, 180
HpyF3I CTNAG 4 cut(s) 393, 469, 546, 994
HpySE526I ACGT 5 cut(s) 201, 212, 219, 748, 837
Hsp92I GRCGYC 2 cut(s) 177, 1010
Hsp92II CATG 2 cut(s) 684, 872
Kpn2I TCCGGA 1 cut(s) 589
KpnI GGTACC 1 cut(s) 663
KspAI GTTAAC 2 cut(s) 253, 496
Kzo9I GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
LmnI GCTCC 5 cut(s) 136, 484, 584, 592, 847
Lsp1109I GCAGC 3 cut(s) 257, 454, 921
LweI GCATC 1 cut(s) 922
MaeI CTAG 5 cut(s) 459, 561, 566, 797, 821
MaeII ACGT 5 cut(s) 201, 212, 219, 748, 837
MaeIII GTNAC 5 cut(s) 599, 683, 737, 833, 881
MalI GATC 8 cut(s) 53, 119, 209, 260, 349, 477, 522, 714
MboI GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
MboII GAAGA 9 cut(s) 96, 112, 283, 286, 408, 411, 741, 789, 809
MflI RGATCY 3 cut(s) 475, 520, 712
MhlI GDGCHC 1 cut(s) 589
MluCI AATT 2 cut(s) 368, 607
MlyI GAGTC 2 cut(s) 344, 963
MmeI TCCRAC 2 cut(s) 312, 621
MroI TCCGGA 1 cut(s) 589
MroXI GAANNNNTTC 1 cut(s) 620
MseI TTAA 3 cut(s) 252, 495, 717
MslI CAYNNNNRTG 1 cut(s) 698
MspA1I CMGCKG 1 cut(s) 137
MspCI CTTAAG 1 cut(s) 716
MspI CCGG 7 cut(s) 86, 171, 590, 627, 657, 831, 856
MspR9I CCNGG 2 cut(s) 918, 961
MvaI CCWGG 2 cut(s) 918, 961
MvnI CGCG 2 cut(s) 41, 605
MwoI GCNNNNNNNGC 2 cut(s) 44, 180
NdeII GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
NlaIII CATG 2 cut(s) 684, 872
NlaIV GGNNCC 4 cut(s) 486, 661, 843, 863
NmuCI GTSAC 3 cut(s) 599, 833, 881
OliI CACNNNNGTG 1 cut(s) 698
PaeR7I CTCGAG 2 cut(s) 437, 571
PcsI WCGNNNNNNNCGW 3 cut(s) 312, 356, 809
PdmI GAANNNNTTC 1 cut(s) 620
PfeI GAWTC 5 cut(s) 515, 633, 651, 769, 974
PinAI ACCGGT 1 cut(s) 855
PkrI GCNGC 7 cut(s) 40, 91, 94, 176, 247, 444, 936
PleI GAGTC 2 cut(s) 343, 963
PmaCI CACGTG 2 cut(s) 202, 838
PmlI CACGTG 2 cut(s) 202, 838
PpsI GAGTC 2 cut(s) 343, 963
Ppu21I YACGTR 2 cut(s) 202, 838
PshAI GACNNNNGTC 1 cut(s) 159
Psp124BI GAGCTC 1 cut(s) 589
Psp6I CCWGG 2 cut(s) 916, 959
PspCI CACGTG 2 cut(s) 202, 838
PspGI CCWGG 2 cut(s) 916, 959
PspN4I GGNNCC 4 cut(s) 486, 661, 843, 863
PspPI GGNCC 2 cut(s) 196, 920
PspXI VCTCGAGB 1 cut(s) 571
PstNI CAGNNNCTG 1 cut(s) 448
PsuI RGATCY 3 cut(s) 475, 520, 712
RsaI GTAC 2 cut(s) 227, 661
RsaNI GTAC 2 cut(s) 226, 660
RseI CAYNNNNRTG 1 cut(s) 698
SacI GAGCTC 1 cut(s) 589
SaqAI TTAA 3 cut(s) 252, 495, 717
SatI GCNGC 7 cut(s) 39, 90, 93, 175, 246, 443, 935
Sau3AI GATC 8 cut(s) 51, 117, 207, 258, 347, 475, 520, 712
Sau96I GGNCC 2 cut(s) 196, 920
SchI GAGTC 2 cut(s) 344, 963
ScrFI CCNGG 2 cut(s) 918, 961
SduI GDGCHC 1 cut(s) 589
SfaNI GCATC 1 cut(s) 922
Sfr274I CTCGAG 2 cut(s) 437, 571
SgrAI CRCCGGYG 1 cut(s) 855
SinI GGWCC 2 cut(s) 196, 920
SlaI CTCGAG 2 cut(s) 437, 571
SmiMI CAYNNNNRTG 1 cut(s) 698
SmlI CTYRAG 3 cut(s) 437, 571, 716
SmoI CTYRAG 3 cut(s) 437, 571, 716
Sse9I AATT 2 cut(s) 368, 607
SsiI CCGC 7 cut(s) 36, 39, 89, 92, 137, 174, 473
SspI AATATT 1 cut(s) 376
SspMI CTAG 5 cut(s) 459, 561, 566, 797, 821
SstI GAGCTC 1 cut(s) 589
StyD4I CCNGG 2 cut(s) 916, 959
StyI CCWWGG 1 cut(s) 565
TaaI ACNGT 3 cut(s) 400, 500, 813
TaiI ACGT 5 cut(s) 204, 215, 222, 751, 840
TaqI TCGA 7 cut(s) 257, 438, 534, 572, 753, 972, 1027
TasI AATT 2 cut(s) 368, 607
TauI GCSGC 4 cut(s) 41, 92, 95, 177
TfiI GAWTC 5 cut(s) 515, 633, 651, 769, 974
Tru1I TTAA 3 cut(s) 252, 495, 717
Tru9I TTAA 3 cut(s) 252, 495, 717
TscAI CASTG 1 cut(s) 54
TseFI GTSAC 3 cut(s) 599, 833, 881
TseI GCWGC 3 cut(s) 245, 442, 934
Tsp45I GTSAC 3 cut(s) 599, 833, 881
TspDTI ATGAA 1 cut(s) 292
TspGWI ACGGA 4 cut(s) 54, 89, 177, 412
TspRI CASTG 1 cut(s) 54
Vha464I CTTAAG 1 cut(s) 716
VpaK11BI GGWCC 2 cut(s) 196, 920
XapI RAATTY 2 cut(s) 368, 607
XcmI CCANNNNNNNNNTGG 1 cut(s) 872
XhoI CTCGAG 2 cut(s) 437, 571
XmaJI CCTAGG 1 cut(s) 565
XmnI GAANNNNTTC 1 cut(s) 620
XspI CTAG 5 cut(s) 459, 561, 566, 797, 821
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.