AT4G10843

glomerular visceral epithelial cell migration

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
6662061 .. 6664476
2416 bp
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UTR
Exon/CDS
Intron
AT4G10843.2

Sequence Viewer

Length: 318 bp
ATGAAGTTACGGAGGAAGCGGTGGTCGTGGCTGGTAATCGAAACAAAATCGTTGAAGTCTTCTTTGCCTGAAAGAAGAAGAAGAAGACGGTTTATCTTCGCTCTTTGTGATTCGAGTTTTCTTTTGGATGTCAATCTATTCACTTTCTGGACGGAGGAGACACTAATTGAGGACAAATCTTTATCATTTTGCACTTGTAATGGAGAAAGATGGAGAAGATTGTTTTCTTTCTACAAGTTGCTGATGATTCTTAAAGAAACGTCGGATATGGAGAATCTGTTACAAATGGTTCACCTTTCAGGTTTGTTCATGGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

12.82

Weight (kDa)

9.84

Isoelectric Point (pI)

95.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019633)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G10843 AT4G10843 AT4G10843 AT4G10843 AT5G37793
malus_domestica MD10G1119400.v1.1
pyrus_communis pycom10g10280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 19
AgsI TTSAA 1 cut(s) 55
Alw26I GTCTC 1 cut(s) 152
AsuHPI GGTGA 1 cut(s) 284
BbsI GAAGAC 2 cut(s) 51, 91
BccI CCATC 1 cut(s) 204
BcoDI GTCTC 1 cut(s) 152
BpiI GAAGAC 2 cut(s) 51, 91
BsaBI GATNNNNATC 1 cut(s) 132
BsaXI ACNNNNNCTCC 2 cut(s) 263, 293
Bse8I GATNNNNATC 1 cut(s) 132
BseGI GGATG 1 cut(s) 133
BseJI GATNNNNATC 1 cut(s) 132
BseRI GAGGAG 1 cut(s) 170
BsmAI GTCTC 1 cut(s) 152
BspACI CCGC 1 cut(s) 19
Bst4CI ACNGT 1 cut(s) 90
BstF5I GGATG 1 cut(s) 133
BstMAI GTCTC 1 cut(s) 152
BstV2I GAAGAC 2 cut(s) 51, 91
BtsCI GGATG 1 cut(s) 133
CviAII CATG 1 cut(s) 310
CviJI RGCY 1 cut(s) 31
CviKI_1 RGCY 1 cut(s) 31
FaeI CATG 1 cut(s) 313
FaiI YATR 2 cut(s) 269, 311
FatI CATG 1 cut(s) 309
FokI GGATG 1 cut(s) 140
Hin1II CATG 1 cut(s) 313
HinfI GANTC 3 cut(s) 110, 247, 274
HphI GGTGA 1 cut(s) 284
Hpy166II GTNNAC 1 cut(s) 292
Hpy188I TCNGA 1 cut(s) 265
Hpy188III TCNNGA 1 cut(s) 148
Hpy8I GTNNAC 1 cut(s) 292
Hpy99I CGWCG 1 cut(s) 265
HpyCH4III ACNGT 1 cut(s) 90
HpyCH4IV ACGT 1 cut(s) 260
HpyCH4V TGCA 1 cut(s) 192
HpySE526I ACGT 1 cut(s) 260
Hsp92II CATG 1 cut(s) 313
LpnPI CCDG 4 cut(s) 17, 81, 133, 285
MaeII ACGT 1 cut(s) 260
MaeIII GTNAC 2 cut(s) 6, 279
MboII GAAGA 7 cut(s) 51, 87, 88, 90, 93, 96, 228
MluCI AATT 1 cut(s) 165
MmeI TCCRAC 1 cut(s) 243
MnlI CCTC 3 cut(s) 6, 148, 163
MseI TTAA 1 cut(s) 252
NlaIII CATG 1 cut(s) 313
PfeI GAWTC 3 cut(s) 110, 247, 274
SaqAI TTAA 1 cut(s) 252
SetI ASST 3 cut(s) 263, 297, 304
SgeI CNNG 8 cut(s) 39, 44, 80, 126, 160, 207, 247, 312
Sse9I AATT 1 cut(s) 165
SsiI CCGC 1 cut(s) 19
TaaI ACNGT 1 cut(s) 90
TaiI ACGT 1 cut(s) 263
TaqI TCGA 2 cut(s) 39, 113
TasI AATT 1 cut(s) 165
TfiI GAWTC 3 cut(s) 110, 247, 274
Tru1I TTAA 1 cut(s) 252
Tru9I TTAA 1 cut(s) 252
TspDTI ATGAA 2 cut(s) 17, 298
TspGWI ACGGA 2 cut(s) 25, 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.