Replication protein A interacting middle
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12760 |
| malus_domestica | MD03G1298900.v1.1 MD11G1318200.v1.1 |
| prunus_persica | Prupe.8G267300_v2.0.a1 Prupe.8G267300_v2.0.a1 Prupe.8G267300_v2.0.a1 |
| pyrus_communis | pycom03g23700 pycom11g27740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 194 |
| AciI | CCGC | 1 cut(s) | 468 |
| AclI | AACGTT | 1 cut(s) | 758 |
| AclWI | GGATC | 2 cut(s) | 164, 424 |
| AcoI | YGGCCR | 1 cut(s) | 465 |
| AcsI | RAATTY | 1 cut(s) | 695 |
| AcuI | CTGAAG | 3 cut(s) | 94, 159, 303 |
| AfaI | GTAC | 1 cut(s) | 734 |
| AflIII | ACRYGT | 2 cut(s) | 582, 740 |
| AgsI | TTSAA | 4 cut(s) | 232, 434, 625, 724 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 408, 440 |
| AluBI | AGCT | 3 cut(s) | 23, 550, 598 |
| AluI | AGCT | 3 cut(s) | 23, 550, 598 |
| Alw26I | GTCTC | 1 cut(s) | 395 |
| AlwI | GGATC | 2 cut(s) | 164, 424 |
| AoxI | GGCC | 1 cut(s) | 465 |
| ApeKI | GCWGC | 1 cut(s) | 595 |
| ApoI | RAATTY | 1 cut(s) | 695 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 107, 259 |
| AspLEI | GCGC | 1 cut(s) | 655 |
| AspS9I | GGNCC | 1 cut(s) | 42 |
| AsuHPI | GGTGA | 2 cut(s) | 353, 671 |
| AvaII | GGWCC | 1 cut(s) | 42 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 716, 748 |
| BbsI | GAAGAC | 1 cut(s) | 450 |
| BbvI | GCAGC | 1 cut(s) | 607 |
| BcoDI | GTCTC | 1 cut(s) | 395 |
| BisI | GCNGC | 2 cut(s) | 468, 596 |
| BlsI | GCNGC | 2 cut(s) | 469, 597 |
| Bme18I | GGWCC | 1 cut(s) | 42 |
| BmgT120I | GGNCC | 1 cut(s) | 42 |
| BmsI | GCATC | 1 cut(s) | 668 |
| BpiI | GAAGAC | 1 cut(s) | 450 |
| BpmI | CTGGAG | 1 cut(s) | 653 |
| Bsa29I | ATCGAT | 1 cut(s) | 573 |
| BseCI | ATCGAT | 1 cut(s) | 573 |
| BseGI | GGATG | 1 cut(s) | 683 |
| BseMII | CTCAG | 1 cut(s) | 494 |
| BseXI | GCAGC | 1 cut(s) | 607 |
| BshFI | GGCC | 1 cut(s) | 467 |
| BshVI | ATCGAT | 1 cut(s) | 573 |
| BsmAI | GTCTC | 1 cut(s) | 395 |
| BsnI | GGCC | 1 cut(s) | 467 |
| Bsp1407I | TGTACA | 1 cut(s) | 732 |
| Bsp143I | GATC | 3 cut(s) | 156, 178, 416 |
| BspACI | CCGC | 1 cut(s) | 468 |
| BspANI | GGCC | 1 cut(s) | 467 |
| BspCNI | CTCAG | 1 cut(s) | 493 |
| BspDI | ATCGAT | 1 cut(s) | 573 |
| BspPI | GGATC | 2 cut(s) | 164, 424 |
| BsrGI | TGTACA | 1 cut(s) | 732 |
| BssMI | GATC | 3 cut(s) | 156, 178, 416 |
| Bst4CI | ACNGT | 2 cut(s) | 500, 659 |
| Bst6I | CTCTTC | 3 cut(s) | 109, 345, 606 |
| BstAUI | TGTACA | 1 cut(s) | 732 |
| BstDEI | CTNAG | 1 cut(s) | 480 |
| BstF5I | GGATG | 1 cut(s) | 683 |
| BstHHI | GCGC | 1 cut(s) | 655 |
| BstKTI | GATC | 3 cut(s) | 159, 181, 419 |
| BstMAI | GTCTC | 1 cut(s) | 395 |
| BstMBI | GATC | 3 cut(s) | 156, 178, 416 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 20 |
| BstNSI | RCATGY | 2 cut(s) | 586, 744 |
| BstV1I | GCAGC | 1 cut(s) | 607 |
| BstV2I | GAAGAC | 1 cut(s) | 450 |
| BstX2I | RGATCY | 1 cut(s) | 156 |
| BstYI | RGATCY | 1 cut(s) | 156 |
| Bsu15I | ATCGAT | 1 cut(s) | 573 |
| BsuRI | GGCC | 1 cut(s) | 467 |
| BsuTUI | ATCGAT | 1 cut(s) | 573 |
| BtsCI | GGATG | 1 cut(s) | 683 |
| BtsIMutI | CAGTG | 2 cut(s) | 505, 706 |
| CfoI | GCGC | 1 cut(s) | 655 |
| Cfr13I | GGNCC | 1 cut(s) | 42 |
| ClaI | ATCGAT | 1 cut(s) | 573 |
| Csp6I | GTAC | 1 cut(s) | 733 |
| CviAII | CATG | 3 cut(s) | 438, 583, 741 |
| CviJI | RGCY | 7 cut(s) | 23, 467, 516, 550, 598, 728, 749 |
| CviKI_1 | RGCY | 7 cut(s) | 23, 467, 516, 550, 598, 728, 749 |
| CviQI | GTAC | 1 cut(s) | 733 |
| DdeI | CTNAG | 1 cut(s) | 480 |
| DpnI | GATC | 3 cut(s) | 158, 180, 418 |
| DpnII | GATC | 3 cut(s) | 156, 178, 416 |
| DraI | TTTAAA | 1 cut(s) | 495 |
| EaeI | YGGCCR | 1 cut(s) | 465 |
| Eam1104I | CTCTTC | 3 cut(s) | 109, 345, 606 |
| EarI | CTCTTC | 3 cut(s) | 109, 345, 606 |
| Eco47I | GGWCC | 1 cut(s) | 42 |
| Eco57I | CTGAAG | 3 cut(s) | 94, 159, 303 |
| EcoRI | GAATTC | 1 cut(s) | 695 |
| FaeI | CATG | 3 cut(s) | 441, 586, 744 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 534, 566 |
| FatI | CATG | 3 cut(s) | 437, 582, 740 |
| Fnu4HI | GCNGC | 2 cut(s) | 468, 596 |
| FokI | GGATG | 1 cut(s) | 690 |
| Fsp4HI | GCNGC | 2 cut(s) | 468, 596 |
| GlaI | GCGC | 1 cut(s) | 654 |
| GluI | GCNGC | 2 cut(s) | 468, 596 |
| GsuI | CTGGAG | 1 cut(s) | 653 |
| HaeIII | GGCC | 1 cut(s) | 467 |
| HhaI | GCGC | 1 cut(s) | 655 |
| Hin1II | CATG | 3 cut(s) | 441, 586, 744 |
| Hin6I | GCGC | 1 cut(s) | 653 |
| HinP1I | GCGC | 1 cut(s) | 653 |
| HinfI | GANTC | 4 cut(s) | 133, 245, 274, 559 |
| HphI | GGTGA | 2 cut(s) | 353, 671 |
| Hpy166II | GTNNAC | 3 cut(s) | 140, 503, 662 |
| Hpy188III | TCNNGA | 2 cut(s) | 252, 670 |
| Hpy8I | GTNNAC | 3 cut(s) | 140, 503, 662 |
| Hpy99I | CGWCG | 1 cut(s) | 253 |
| HpyAV | CCTTC | 3 cut(s) | 311, 332, 718 |
| HpyCH4III | ACNGT | 2 cut(s) | 500, 659 |
| HpyCH4IV | ACGT | 2 cut(s) | 408, 758 |
| HpyCH4V | TGCA | 6 cut(s) | 370, 537, 579, 595, 634, 681 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 20 |
| HpyF3I | CTNAG | 1 cut(s) | 480 |
| HpySE526I | ACGT | 2 cut(s) | 408, 758 |
| Hsp92II | CATG | 3 cut(s) | 441, 586, 744 |
| HspAI | GCGC | 1 cut(s) | 653 |
| Kzo9I | GATC | 3 cut(s) | 156, 178, 416 |
| LpnPI | CCDG | 4 cut(s) | 413, 491, 530, 683 |
| Lsp1109I | GCAGC | 1 cut(s) | 607 |
| LweI | GCATC | 1 cut(s) | 668 |
| MaeII | ACGT | 2 cut(s) | 408, 758 |
| MalI | GATC | 3 cut(s) | 158, 180, 418 |
| MboI | GATC | 3 cut(s) | 156, 178, 416 |
| MboII | GAAGA | 8 cut(s) | 126, 137, 165, 296, 362, 455, 464, 623 |
| MflI | RGATCY | 1 cut(s) | 156 |
| MluCI | AATT | 9 cut(s) | 8, 30, 103, 149, 196, 227, 619, 695, 718 |
| MlyI | GAGTC | 2 cut(s) | 127, 268 |
| MnlI | CCTC | 9 cut(s) | 55, 235, 307, 442, 502, 607, 668, 739, 757 |
| MroXI | GAANNNNTTC | 2 cut(s) | 107, 259 |
| MseI | TTAA | 6 cut(s) | 152, 324, 494, 600, 618, 686 |
| MssI | GTTTAAAC | 1 cut(s) | 495 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 20 |
| NdeII | GATC | 3 cut(s) | 156, 178, 416 |
| NlaIII | CATG | 3 cut(s) | 441, 586, 744 |
| NspI | RCATGY | 2 cut(s) | 586, 744 |
| PciI | ACATGT | 2 cut(s) | 582, 740 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 32 |
| PdmI | GAANNNNTTC | 2 cut(s) | 107, 259 |
| PfeI | GAWTC | 2 cut(s) | 245, 559 |
| PkrI | GCNGC | 2 cut(s) | 469, 597 |
| PleI | GAGTC | 2 cut(s) | 127, 268 |
| PmeI | GTTTAAAC | 1 cut(s) | 495 |
| PpsI | GAGTC | 2 cut(s) | 127, 268 |
| PscI | ACATGT | 2 cut(s) | 582, 740 |
| PsiI | TTATAA | 1 cut(s) | 194 |
| Psp1406I | AACGTT | 1 cut(s) | 758 |
| PspPI | GGNCC | 1 cut(s) | 42 |
| PsuI | RGATCY | 1 cut(s) | 156 |
| RsaI | GTAC | 1 cut(s) | 734 |
| RsaNI | GTAC | 1 cut(s) | 733 |
| SaqAI | TTAA | 6 cut(s) | 152, 324, 494, 600, 618, 686 |
| SatI | GCNGC | 2 cut(s) | 468, 596 |
| Sau3AI | GATC | 3 cut(s) | 156, 178, 416 |
| Sau96I | GGNCC | 1 cut(s) | 42 |
| SchI | GAGTC | 2 cut(s) | 127, 268 |
| SfaNI | GCATC | 1 cut(s) | 668 |
| SinI | GGWCC | 1 cut(s) | 42 |
| Sse9I | AATT | 9 cut(s) | 8, 30, 103, 149, 196, 227, 619, 695, 718 |
| SsiI | CCGC | 1 cut(s) | 468 |
| TaaI | ACNGT | 2 cut(s) | 500, 659 |
| TaiI | ACGT | 2 cut(s) | 411, 761 |
| TaqI | TCGA | 3 cut(s) | 26, 251, 573 |
| TasI | AATT | 9 cut(s) | 8, 30, 103, 149, 196, 227, 619, 695, 718 |
| TatI | WGTACW | 1 cut(s) | 732 |
| TauI | GCSGC | 1 cut(s) | 470 |
| TfiI | GAWTC | 2 cut(s) | 245, 559 |
| Tru1I | TTAA | 6 cut(s) | 152, 324, 494, 600, 618, 686 |
| Tru9I | TTAA | 6 cut(s) | 152, 324, 494, 600, 618, 686 |
| TscAI | CASTG | 2 cut(s) | 505, 706 |
| TseI | GCWGC | 1 cut(s) | 595 |
| TspDTI | ATGAA | 2 cut(s) | 240, 351 |
| TspGWI | ACGGA | 1 cut(s) | 55 |
| TspRI | CASTG | 2 cut(s) | 505, 706 |
| VpaK11BI | GGWCC | 1 cut(s) | 42 |
| XapI | RAATTY | 1 cut(s) | 695 |
| XceI | RCATGY | 2 cut(s) | 586, 744 |
| XmnI | GAANNNNTTC | 2 cut(s) | 107, 259 |