AT4G23320

Cysteine-rich receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0019122
Physical Location & Seq
Reverse (-)
12189089 .. 12191704
2616 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G23320.3

Sequence Viewer

Length: 1524 bp
ATGGAGATTCTGAGGAGTGATAACTATACCAGAGATTTTCAAGCTAACTTGACGGATTTGGAAATTACATGGGAGGCTTTGATGATTCGTATGATAGACCAAGCTTCATATTTGTACTATGCAGCCGGGATACGAAAGCTTGAGACGTCTATCTCACGCATTTACGGTTTTGTGCAATGCAGTAGAGACTTATCTCTTCAAAACTGCACCAAGTGTCTACAACAAAACGTGGTTGAGTATAGGTCATGTTGCCGTGGGAGACAAGGAGGTATTATTTTGAGGCCAAGCTGTTTCATTCGATGGGAGCTTTATCCGTTCTTGGGACTTTTTGATAATATTCGTCCTCGTCAAAAAGATGGCAAAAGCATTTCTACAGGAGCTATTGTGGCGATTATCGTTGTTCCCATCTTATTGCTTGCTCTAGGAGTTGGTCTTTGGAAGAGGAGAAAAGCATATAAAACAAAGACAACTAAAATAGCAGATGATATTACAACTTCAGGTTCACTTCAGTTCGAGTTTAAAGCAATTGAAGCTGCCACATGTAATTTTCATAATGTTAACAAGCTTGGTCATGGTGGTTTTGGTGAAGTTTACAAGGGAACATTTCCGAATGGAACAGAAGTTGCTGTGAAGAGGTTGTCTAAAACGTCAGGACAAGGTGAAGAAGAGTTCAAGAACGAGGTGTTTCTTGTAGCAAAGCTTCAACATAGAAATCTTGTTAAGCTTCTCGGGTATGCTGTCAAAGGAGACGAAAAGATATTAGTCTACGAGTTTTTGCCTAACAAAAGTCTCGACCACTTCCTCTTTGACCCGGTAAAGAAGGGTCAACTAGATTGGACAAGAAGATACAACATTATTAATGGAATTACTCGAGGGATTGTGTATCTTCATCAAGATTCACGGCTTACAATCATACACCGTGACCTCAAAGCGGGTAACATTCTCTTAGATGCCGATATGAACCCGAAAATCGTGGATTTTGGTGTGGCTAGGAATTTTAGAGTGGACCAAACTGAAGCTACCACAGCAAGAGTAGTTGGAACAATCGGTTACATGCCACCCGAATATGTGACGAATGGGCAGTTCTCGACGAAATCTGATGTGTATAGCTTTGGAGTATTGATTCTGGAGATTATTGGTGGGAAAAAGAATAGTAGCATCAACGAGACAGACGGCTCAATAAGTAACTTAGTCACATATGTATGGAGGCTTTGGAACAATGAACCATTGTTGGAACTGGTAGACGCACCCATGGGGGAGAATTATGATAGAAATGAAGTCATTAGATGCATTCACATTGGATTGTTATGTGTTCAAGAAAATCCTGCTGATCGTCCAACGATGTCTACAGTCTTTCATATGCTCACAAATACTTCAATTACTCTACATGTGCCTCAACCACCAGGATTTGTCTTTAGGGTCAGATTCAAGCCAAATCCCTTAGCTGATAGATTGCAGCGTGGTCCGTCTACTAGCATGTCTTTTTCTTGTTCTGTATCGGTCACGTGTGTTAGTCCTCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr Stress-antifung

Protein Analysis

507

Amino Acids

57.25

Weight (kDa)

9.08

Isoelectric Point (pI)

39.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 29 - 124 9.2e-10 Salt stress response/antifungal
Pkinase PF00069 204 - 474 1.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 207 - 475 9.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019122)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G23240 AT4G23240 AT4G23290 AT4G23290 AT4G23320 AT4G23320 AT4G23320
rosa_samantha Rh2AG249100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 149
AccI GTMKAC 5 cut(s) 217, 765, 1242, 1346, 1469
AciI CCGC 1 cut(s) 932
AcsI RAATTY 1 cut(s) 994
AcuI CTGAAG 3 cut(s) 480, 491, 1035
AcvI CACGTG 1 cut(s) 1506
AcyI GRCGYC 1 cut(s) 146
AdeI CACNNNGTG 1 cut(s) 213
AfaI GTAC 1 cut(s) 116
AfiI CCNNNNNNNGG 2 cut(s) 320, 931
AflIII ACRYGT 3 cut(s) 539, 1387, 1505
AgsI TTSAA 8 cut(s) 41, 200, 530, 673, 704, 1316, 1377, 1429
AjnI CCWGG 1 cut(s) 1402
Alw26I GTCTC 6 cut(s) 137, 180, 253, 741, 794, 1160
Ama87I CYCGRG 2 cut(s) 728, 870
AoxI GGCC 1 cut(s) 281
ApeKI GCWGC 3 cut(s) 122, 533, 1456
ApoI RAATTY 1 cut(s) 994
AseI ATTAAT 1 cut(s) 858
AspS9I GGNCC 2 cut(s) 1006, 1463
AsuC2I CCSGG 2 cut(s) 127, 812
AsuHPI GGTGA 2 cut(s) 596, 671
AvaI CYCGRG 2 cut(s) 728, 870
AvaII GGWCC 2 cut(s) 1006, 1463
BarI GAAGNNNNNNTAC 2 cut(s) 684, 716
BbrPI CACGTG 1 cut(s) 1506
BbvI GCAGC 3 cut(s) 134, 520, 1468
BccI CCATC 3 cut(s) 294, 350, 413
BceAI ACGGC 3 cut(s) 237, 917, 1189
BciT130I CCWGG 1 cut(s) 1404
BciVI GTATCC 1 cut(s) 123
BcnI CCSGG 2 cut(s) 127, 812
BcoDI GTCTC 6 cut(s) 137, 180, 253, 741, 794, 1160
BfaI CTAG 4 cut(s) 422, 830, 990, 1473
BfmI CTRYAG 2 cut(s) 372, 1347
BfuI GTATCC 1 cut(s) 123
BisI GCNGC 3 cut(s) 123, 534, 1457
BlsI GCNGC 3 cut(s) 124, 535, 1458
Bme1390I CCNGG 3 cut(s) 127, 812, 1404
Bme18I GGWCC 2 cut(s) 1006, 1463
BmeT110I CYCGRG 2 cut(s) 728, 870
BmgT120I GGNCC 2 cut(s) 1006, 1463
BmrFI CCNGG 3 cut(s) 127, 812, 1404
BmsI GCATC 3 cut(s) 940, 1167, 1277
BpmI CTGGAG 1 cut(s) 1148
Bpu10I CCTNAGC 1 cut(s) 1441
BpuEI CTTGAG 1 cut(s) 161
BpuMI CCSGG 2 cut(s) 127, 812
BsaAI YACGTR 1 cut(s) 1506
BsaHI GRCGYC 1 cut(s) 146
BsaJI CCNNGG 2 cut(s) 253, 1251
BsaXI ACNNNNNCTCC 2 cut(s) 369, 399
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 931
Bse1I ACTGG 1 cut(s) 1242
Bse3DI GCAATG 1 cut(s) 182
BseBI CCWGG 1 cut(s) 1404
BseDI CCNNGG 2 cut(s) 253, 1251
BseLI CCNNNNNNNGG 2 cut(s) 320, 931
BseMI GCAATG 1 cut(s) 182
BseNI ACTGG 1 cut(s) 1242
BseRI GAGGAG 2 cut(s) 28, 457
BseXI GCAGC 3 cut(s) 134, 520, 1468
BsgI GTGCAG 1 cut(s) 190
BshFI GGCC 1 cut(s) 283
BsiHKCI CYCGRG 2 cut(s) 728, 870
BsiSI CCGG 2 cut(s) 126, 812
BslFI GGGAC 1 cut(s) 336
BslI CCNNNNNNNGG 2 cut(s) 320, 931
BsmAI GTCTC 6 cut(s) 137, 180, 253, 741, 794, 1160
BsmBI CGTCTC 2 cut(s) 137, 741
BsmFI GGGAC 1 cut(s) 336
BsmI GAATGC 1 cut(s) 1290
BsnI GGCC 1 cut(s) 283
BsoBI CYCGRG 2 cut(s) 728, 870
Bsp143I GATC 1 cut(s) 1330
Bsp19I CCATGG 1 cut(s) 1251
BspACI CCGC 1 cut(s) 932
BspANI GGCC 1 cut(s) 283
BsrDI GCAATG 1 cut(s) 182
BsrI ACTGG 1 cut(s) 1242
BssECI CCNNGG 2 cut(s) 253, 1251
BssMI GATC 1 cut(s) 1330
BssNI GRCGYC 1 cut(s) 146
BssT1I CCWWGG 1 cut(s) 1251
Bst2UI CCWGG 1 cut(s) 1404
Bst4CI ACNGT 3 cut(s) 167, 920, 1351
Bst6I CTCTTC 4 cut(s) 201, 434, 626, 660
BstACI GRCGYC 1 cut(s) 146
BstBAI YACGTR 1 cut(s) 1506
BstC8I GCNNGC 1 cut(s) 417
BstDEI CTNAG 4 cut(s) 11, 946, 1189, 1441
BstDSI CCRYGG 2 cut(s) 253, 1251
BstKTI GATC 1 cut(s) 1333
BstMAI GTCTC 6 cut(s) 137, 180, 253, 741, 794, 1160
BstMBI GATC 1 cut(s) 1330
BstMWI GCNNNNNNNGC 3 cut(s) 386, 530, 1025
BstNI CCWGG 1 cut(s) 1404
BstNSI RCATGY 4 cut(s) 543, 1057, 1391, 1480
BstSCI CCNGG 3 cut(s) 125, 810, 1402
BstSFI CTRYAG 2 cut(s) 372, 1347
BstV1I GCAGC 3 cut(s) 134, 520, 1468
BsuI GTATCC 1 cut(s) 123
BsuRI GGCC 1 cut(s) 283
BtgI CCRYGG 2 cut(s) 253, 1251
Cac8I GCNNGC 1 cut(s) 417
Cfr13I GGNCC 2 cut(s) 1006, 1463
CseI GACGC 1 cut(s) 1253
Csp6I GTAC 1 cut(s) 115
CviAII CATG 8 cut(s) 69, 246, 540, 572, 1054, 1252, 1388, 1477
CviQI GTAC 1 cut(s) 115
DdeI CTNAG 4 cut(s) 11, 946, 1189, 1441
DpnI GATC 1 cut(s) 1332
DpnII GATC 1 cut(s) 1330
DraI TTTAAA 1 cut(s) 520
DraIII CACNNNGTG 1 cut(s) 213
Eam1104I CTCTTC 4 cut(s) 201, 434, 626, 660
EarI CTCTTC 4 cut(s) 201, 434, 626, 660
Eco130I CCWWGG 1 cut(s) 1251
Eco47I GGWCC 2 cut(s) 1006, 1463
Eco57I CTGAAG 3 cut(s) 480, 491, 1035
Eco72I CACGTG 1 cut(s) 1506
Eco88I CYCGRG 2 cut(s) 728, 870
EcoRII CCWGG 1 cut(s) 1402
EcoT14I CCWWGG 1 cut(s) 1251
EcoT22I ATGCAT 1 cut(s) 1292
ErhI CCWWGG 1 cut(s) 1251
Esp3I CGTCTC 2 cut(s) 137, 741
FaeI CATG 8 cut(s) 72, 249, 543, 575, 1057, 1255, 1391, 1480
FaqI GGGAC 1 cut(s) 336
FatI CATG 8 cut(s) 68, 245, 539, 571, 1053, 1251, 1387, 1476
FauI CCCGC 1 cut(s) 925
FauNDI CATATG 2 cut(s) 1198, 1359
FblI GTMKAC 5 cut(s) 217, 765, 1242, 1346, 1469
Fnu4HI GCNGC 3 cut(s) 123, 534, 1457
Fsp4HI GCNGC 3 cut(s) 123, 534, 1457
FspBI CTAG 4 cut(s) 422, 830, 990, 1473
GluI GCNGC 3 cut(s) 123, 534, 1457
GsuI CTGGAG 1 cut(s) 1148
HaeIII GGCC 1 cut(s) 283
HapII CCGG 2 cut(s) 126, 812
HgaI GACGC 1 cut(s) 1253
Hin1I GRCGYC 1 cut(s) 146
Hin1II CATG 8 cut(s) 72, 249, 543, 575, 1057, 1255, 1391, 1480
HincII GTYRAC 2 cut(s) 559, 827
HindII GTYRAC 2 cut(s) 559, 827
HindIII AAGCTT 5 cut(s) 102, 137, 563, 698, 722
HinfI GANTC 5 cut(s) 7, 85, 896, 1123, 1425
HpaI GTTAAC 1 cut(s) 559
HpaII CCGG 2 cut(s) 126, 812
HphI GGTGA 2 cut(s) 596, 671
Hpy188I TCNGA 4 cut(s) 12, 609, 1099, 1424
Hpy188III TCNNGA 7 cut(s) 651, 673, 791, 893, 1087, 1127, 1316
Hpy99I CGWCG 1 cut(s) 1093
HpyAV CCTTC 1 cut(s) 814
HpyCH4III ACNGT 3 cut(s) 167, 920, 1351
HpyCH4IV ACGT 4 cut(s) 146, 228, 647, 1505
HpyCH4V TGCA 6 cut(s) 122, 175, 180, 207, 1290, 1456
HpyF10VI GCNNNNNNNGC 3 cut(s) 386, 530, 1025
HpyF3I CTNAG 4 cut(s) 11, 946, 1189, 1441
HpySE526I ACGT 4 cut(s) 146, 228, 647, 1505
Hsp92I GRCGYC 1 cut(s) 146
Hsp92II CATG 8 cut(s) 72, 249, 543, 575, 1057, 1255, 1391, 1480
KspAI GTTAAC 1 cut(s) 559
Kzo9I GATC 1 cut(s) 1330
LmnI GCTCC 2 cut(s) 304, 377
Lsp1109I GCAGC 3 cut(s) 134, 520, 1468
LweI GCATC 3 cut(s) 940, 1167, 1277
MaeI CTAG 4 cut(s) 422, 830, 990, 1473
MaeII ACGT 4 cut(s) 146, 228, 647, 1505
MaeIII GTNAC 7 cut(s) 920, 935, 1049, 1069, 1184, 1192, 1501
MalI GATC 1 cut(s) 1332
MboI GATC 1 cut(s) 1330
MboII GAAGA 7 cut(s) 188, 451, 643, 674, 677, 855, 878
MfeI CAATTG 1 cut(s) 525
MluCI AATT 7 cut(s) 63, 525, 544, 864, 994, 1261, 1377
MmeI TCCRAC 3 cut(s) 1018, 1212, 1361
Mph1103I ATGCAT 1 cut(s) 1292
MseI TTAA 5 cut(s) 519, 558, 720, 858, 1522
MslI CAYNNNNRTG 1 cut(s) 1201
MspI CCGG 2 cut(s) 126, 812
MspR9I CCNGG 3 cut(s) 127, 812, 1404
MunI CAATTG 1 cut(s) 525
Mva1269I GAATGC 1 cut(s) 1290
MvaI CCWGG 1 cut(s) 1404
MwoI GCNNNNNNNGC 3 cut(s) 386, 530, 1025
NciI CCSGG 2 cut(s) 127, 812
NcoI CCATGG 1 cut(s) 1251
NdeI CATATG 2 cut(s) 1198, 1359
NdeII GATC 1 cut(s) 1330
NlaIII CATG 8 cut(s) 72, 249, 543, 575, 1057, 1255, 1391, 1480
NmuCI GTSAC 4 cut(s) 920, 1069, 1192, 1501
NsiI ATGCAT 1 cut(s) 1292
NspI RCATGY 4 cut(s) 543, 1057, 1391, 1480
PaeR7I CTCGAG 1 cut(s) 870
PciI ACATGT 2 cut(s) 539, 1387
PctI GAATGC 1 cut(s) 1290
PfeI GAWTC 5 cut(s) 7, 85, 896, 1123, 1425
PkrI GCNGC 3 cut(s) 124, 535, 1458
PmaCI CACGTG 1 cut(s) 1506
PmlI CACGTG 1 cut(s) 1506
Ppu21I YACGTR 1 cut(s) 1506
PscI ACATGT 2 cut(s) 539, 1387
PshBI ATTAAT 1 cut(s) 858
Psp6I CCWGG 1 cut(s) 1402
PspCI CACGTG 1 cut(s) 1506
PspGI CCWGG 1 cut(s) 1402
PspPI GGNCC 2 cut(s) 1006, 1463
PspXI VCTCGAGB 1 cut(s) 870
RsaI GTAC 1 cut(s) 116
RsaNI GTAC 1 cut(s) 115
RseI CAYNNNNRTG 1 cut(s) 1201
SaqAI TTAA 5 cut(s) 519, 558, 720, 858, 1522
SatI GCNGC 3 cut(s) 123, 534, 1457
Sau3AI GATC 1 cut(s) 1330
Sau96I GGNCC 2 cut(s) 1006, 1463
ScrFI CCNGG 3 cut(s) 127, 812, 1404
SfaNI GCATC 3 cut(s) 940, 1167, 1277
SfcI CTRYAG 2 cut(s) 372, 1347
Sfr274I CTCGAG 1 cut(s) 870
SinI GGWCC 2 cut(s) 1006, 1463
SlaI CTCGAG 1 cut(s) 870
SmiMI CAYNNNNRTG 1 cut(s) 1201
SmlI CTYRAG 2 cut(s) 140, 870
SmoI CTYRAG 2 cut(s) 140, 870
Sse9I AATT 7 cut(s) 63, 525, 544, 864, 994, 1261, 1377
SsiI CCGC 1 cut(s) 932
SspI AATATT 1 cut(s) 337
SspMI CTAG 4 cut(s) 422, 830, 990, 1473
StyD4I CCNGG 3 cut(s) 125, 810, 1402
StyI CCWWGG 1 cut(s) 1251
TaaI ACNGT 3 cut(s) 167, 920, 1351
TaiI ACGT 4 cut(s) 149, 231, 650, 1508
TaqI TCGA 5 cut(s) 298, 513, 792, 871, 1088
TaqII GACCGA 1 cut(s) 1489
TasI AATT 7 cut(s) 63, 525, 544, 864, 994, 1261, 1377
TatI WGTACW 1 cut(s) 114
TfiI GAWTC 5 cut(s) 7, 85, 896, 1123, 1425
Tru1I TTAA 5 cut(s) 519, 558, 720, 858, 1522
Tru9I TTAA 5 cut(s) 519, 558, 720, 858, 1522
TseFI GTSAC 4 cut(s) 920, 1069, 1192, 1501
TseI GCWGC 3 cut(s) 122, 533, 1456
Tsp45I GTSAC 4 cut(s) 920, 1069, 1192, 1501
TspDTI ATGAA 8 cut(s) 96, 283, 539, 878, 974, 1236, 1290, 1346
TspGWI ACGGA 3 cut(s) 68, 303, 1455
VpaK11BI GGWCC 2 cut(s) 1006, 1463
VspI ATTAAT 1 cut(s) 858
XapI RAATTY 1 cut(s) 994
XceI RCATGY 4 cut(s) 543, 1057, 1391, 1480
XhoI CTCGAG 1 cut(s) 870
XmiI GTMKAC 5 cut(s) 217, 765, 1242, 1346, 1469
XspI CTAG 4 cut(s) 422, 830, 990, 1473
ZraI GACGTC 1 cut(s) 147
Zsp2I ATGCAT 1 cut(s) 1292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.