Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0027305

Physical Location & Seq

Genomic Coordinates Reverse (-)

15558505 .. 15559650

Gene Structure 1146 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G32208.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 462 bp

ATGTTAAGCAAAGCACGTGTTGTGAGCTGGCGATCTGGAAATGTGAAGTCAGGGATGTTAAGCAAAGCACGTGTTGTGAGCTGGCGAGCTGGCAATGCAAATGGACATGGTGAGAGAAGCAGAGTTGCATGCTCAGAAAGACAAAGAAAAGAATTGATCGACACCAAGAACACAGCTGACACAACAATTTACAGCATAGAGAAGAGTCTTGGTGAATACAGAGAGAAGATCCCAAGTGAAATCGCCAAGGAGATTGAAGATGCTGTGGCAGATCTAAGGAGCGCTTCCTCTGGGGATGATCTCAACGAGATCAAGGCCAAGATTGAGGCGGCAAACAAAGCTGTTTCTAAGATTGGGGAGCACATGTCTGGTGGTTCTGGTGGAGGCTCTGCACCAGGAGGAGGATCTGAGGGAGGCAGTGATCAAGCTCCAGAGGCAGAGTACGAGGAAGTGAAAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005773 GO:0005774 GO:0006950 GO:0006970 GO:0008144 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009615 GO:0009628 GO:0009651 GO:0010035 GO:0010038 GO:0016020 GO:0017076 GO:0030312 GO:0030554 GO:0031090 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0097159 GO:0097367 GO:0098588 GO:0098805 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko05152 map03018 map04212 map05152

Pfam Domains

Protein Families

HSP70

Protein Analysis

153

Amino Acids

16.21

Weight (kDa)

6.76

Isoelectric Point (pI)

47.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	40 - 122	1.9e-11	Hsp70 protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0027305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32208
malus_domestica	MD09G1218100.v1.1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	329
AclWI	GGATC	2 cut(s)	223, 412
AcvI	CACGTG	2 cut(s)	17, 71
AfaI	GTAC	1 cut(s)	443
AfeI	AGCGCT	1 cut(s)	283
AfiI	CCNNNNNNNGG	1 cut(s)	401
AflIII	ACRYGT	3 cut(s)	16, 70, 363
AgsI	TTSAA	1 cut(s)	257
AjnI	CCWGG	1 cut(s)	394
AluBI	AGCT	6 cut(s)	27, 81, 89, 176, 341, 428
AluI	AGCT	6 cut(s)	27, 81, 89, 176, 341, 428
Alw21I	GWGCWC	1 cut(s)	363
AlwI	GGATC	2 cut(s)	223, 412
Aor51HI	AGCGCT	1 cut(s)	283
AoxI	GGCC	1 cut(s)	315
AspLEI	GCGC	1 cut(s)	284
AsuHPI	GGTGA	2 cut(s)	122, 224
BbrPI	CACGTG	2 cut(s)	17, 71
Bbv12I	GWGCWC	1 cut(s)	363
BciT130I	CCWGG	1 cut(s)	396
BclI	TGATCA	1 cut(s)	421
BfoI	RGCGCY	1 cut(s)	285
BglII	AGATCT	1 cut(s)	271
BisI	GCNGC	1 cut(s)	330
BlsI	GCNGC	1 cut(s)	331
Bme1390I	CCNGG	1 cut(s)	396
BmrFI	CCNGG	1 cut(s)	396
BmsI	GCATC	1 cut(s)	250
BpmI	CTGGAG	1 cut(s)	414
BsaAI	YACGTR	2 cut(s)	17, 71
BsaJI	CCNNGG	1 cut(s)	246
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	1 cut(s)	401
Bse3DI	GCAATG	1 cut(s)	100
BseBI	CCWGG	1 cut(s)	396
BseDI	CCNNGG	1 cut(s)	246
BseGI	GGATG	2 cut(s)	60, 301
BseLI	CCNNNNNNNGG	1 cut(s)	401
BseMI	GCAATG	1 cut(s)	100
BseMII	CTCAG	2 cut(s)	147, 399
BseRI	GAGGAG	1 cut(s)	414
BsgI	GTGCAG	1 cut(s)	375
BshFI	GGCC	1 cut(s)	317
BsiHKAI	GWGCWC	1 cut(s)	363
BslI	CCNNNNNNNGG	1 cut(s)	401
BsnI	GGCC	1 cut(s)	317
Bsp1286I	GDGCHC	1 cut(s)	363
Bsp143I	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
BspACI	CCGC	1 cut(s)	329
BspANI	GGCC	1 cut(s)	317
BspCNI	CTCAG	2 cut(s)	146, 400
BspPI	GGATC	2 cut(s)	223, 412
BsrDI	GCAATG	1 cut(s)	100
BssECI	CCNNGG	1 cut(s)	246
BssMI	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
BssT1I	CCWWGG	1 cut(s)	246
Bst2UI	CCWGG	1 cut(s)	396
Bst6I	CTCTTC	1 cut(s)	197
BstBAI	YACGTR	2 cut(s)	17, 71
BstC8I	GCNNGC	5 cut(s)	29, 83, 87, 91, 130
BstDEI	CTNAG	4 cut(s)	133, 275, 348, 408
BstF5I	GGATG	2 cut(s)	60, 301
BstH2I	RGCGCY	1 cut(s)	285
BstHHI	GCGC	1 cut(s)	284
BstKTI	GATC	8 cut(s)	35, 159, 231, 274, 301, 312, 407, 424
BstMBI	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
BstMWI	GCNNNNNNNGC	3 cut(s)	95, 338, 434
BstNI	CCWGG	1 cut(s)	396
BstNSI	RCATGY	2 cut(s)	132, 367
BstSCI	CCNGG	1 cut(s)	394
BstX2I	RGATCY	3 cut(s)	228, 271, 404
BstYI	RGATCY	3 cut(s)	228, 271, 404
BsuRI	GGCC	1 cut(s)	317
BtsCI	GGATG	2 cut(s)	60, 301
BtsI	GCAGTG	1 cut(s)	424
BtsIMutI	CAGTG	1 cut(s)	424
Cac8I	GCNNGC	5 cut(s)	29, 83, 87, 91, 130
CfoI	GCGC	1 cut(s)	284
Csp6I	GTAC	1 cut(s)	442
CviAII	CATG	3 cut(s)	107, 129, 364
CviJI	RGCY	8 cut(s)	27, 81, 89, 176, 317, 341, 387, 428
CviKI_1	RGCY	8 cut(s)	27, 81, 89, 176, 317, 341, 387, 428
CviQI	GTAC	1 cut(s)	442
DdeI	CTNAG	4 cut(s)	133, 275, 348, 408
DpnI	GATC	8 cut(s)	34, 158, 230, 273, 300, 311, 406, 423
DpnII	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
Eam1104I	CTCTTC	1 cut(s)	197
EarI	CTCTTC	1 cut(s)	197
Eco130I	CCWWGG	1 cut(s)	246
Eco47III	AGCGCT	1 cut(s)	283
Eco72I	CACGTG	2 cut(s)	17, 71
EcoRII	CCWGG	1 cut(s)	394
EcoT14I	CCWWGG	1 cut(s)	246
ErhI	CCWWGG	1 cut(s)	246
FaeI	CATG	3 cut(s)	110, 132, 367
FaiI	YATR	4 cut(s)	108, 130, 197, 365
FalI	AAGNNNNNCTT	2 cut(s)	268, 300
FatI	CATG	3 cut(s)	106, 128, 363
FbaI	TGATCA	1 cut(s)	421
Fnu4HI	GCNGC	1 cut(s)	330
FokI	GGATG	2 cut(s)	67, 308
Fsp4HI	GCNGC	1 cut(s)	330
GlaI	GCGC	1 cut(s)	283
GluI	GCNGC	1 cut(s)	330
GsuI	CTGGAG	1 cut(s)	414
HaeII	RGCGCY	1 cut(s)	285
HaeIII	GGCC	1 cut(s)	317
HhaI	GCGC	1 cut(s)	284
Hin1II	CATG	3 cut(s)	110, 132, 367
Hin6I	GCGC	1 cut(s)	282
HinP1I	GCGC	1 cut(s)	282
HinfI	GANTC	1 cut(s)	205
HphI	GGTGA	2 cut(s)	122, 224
Hpy188I	TCNGA	2 cut(s)	136, 409
Hpy188III	TCNNGA	2 cut(s)	36, 431
HpyCH4IV	ACGT	2 cut(s)	16, 70
HpyCH4V	TGCA	3 cut(s)	98, 128, 392
HpyF10VI	GCNNNNNNNGC	3 cut(s)	95, 338, 434
HpyF3I	CTNAG	4 cut(s)	133, 275, 348, 408
HpySE526I	ACGT	2 cut(s)	16, 70
Hsp92II	CATG	3 cut(s)	110, 132, 367
HspAI	GCGC	1 cut(s)	282
Ksp22I	TGATCA	1 cut(s)	421
Kzo9I	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
LmnI	GCTCC	3 cut(s)	279, 358, 433
LweI	GCATC	1 cut(s)	250
MaeII	ACGT	2 cut(s)	16, 70
MalI	GATC	8 cut(s)	34, 158, 230, 273, 300, 311, 406, 423
MboI	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
MboII	GAAGA	3 cut(s)	214, 238, 269
MflI	RGATCY	3 cut(s)	228, 271, 404
MhlI	GDGCHC	1 cut(s)	363
MluCI	AATT	2 cut(s)	152, 186
MlyI	GAGTC	1 cut(s)	214
MnlI	CCTC	9 cut(s)	298, 319, 377, 392, 395, 403, 407, 427, 439
MseI	TTAA	2 cut(s)	5, 59
MspA1I	CMGCKG	1 cut(s)	176
MspR9I	CCNGG	1 cut(s)	396
MvaI	CCWGG	1 cut(s)	396
MwoI	GCNNNNNNNGC	3 cut(s)	95, 338, 434
NdeII	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
NlaIII	CATG	3 cut(s)	110, 132, 367
NspI	RCATGY	2 cut(s)	132, 367
PaeI	GCATGC	1 cut(s)	132
PciI	ACATGT	1 cut(s)	363
PkrI	GCNGC	1 cut(s)	331
PleI	GAGTC	1 cut(s)	213
PmaCI	CACGTG	2 cut(s)	17, 71
PmlI	CACGTG	2 cut(s)	17, 71
PpsI	GAGTC	1 cut(s)	213
Ppu21I	YACGTR	2 cut(s)	17, 71
PscI	ACATGT	1 cut(s)	363
Psp6I	CCWGG	1 cut(s)	394
PspCI	CACGTG	2 cut(s)	17, 71
PspGI	CCWGG	1 cut(s)	394
PsuI	RGATCY	3 cut(s)	228, 271, 404
PvuII	CAGCTG	1 cut(s)	176
RsaI	GTAC	1 cut(s)	443
RsaNI	GTAC	1 cut(s)	442
SaqAI	TTAA	2 cut(s)	5, 59
SatI	GCNGC	1 cut(s)	330
Sau3AI	GATC	8 cut(s)	32, 156, 228, 271, 298, 309, 404, 421
SchI	GAGTC	1 cut(s)	214
ScrFI	CCNGG	1 cut(s)	396
SduI	GDGCHC	1 cut(s)	363
SetI	ASST	8 cut(s)	19, 29, 73, 83, 91, 178, 343, 430
SfaNI	GCATC	1 cut(s)	250
SphI	GCATGC	1 cut(s)	132
Sse9I	AATT	2 cut(s)	152, 186
SsiI	CCGC	1 cut(s)	329
StyD4I	CCNGG	1 cut(s)	394
StyI	CCWWGG	1 cut(s)	246
TaiI	ACGT	2 cut(s)	19, 73
TaqI	TCGA	1 cut(s)	159
TasI	AATT	2 cut(s)	152, 186
TauI	GCSGC	1 cut(s)	332
Tru1I	TTAA	2 cut(s)	5, 59
Tru9I	TTAA	2 cut(s)	5, 59
TscAI	CASTG	1 cut(s)	424
TspRI	CASTG	1 cut(s)	424
XceI	RCATGY	2 cut(s)	132, 367

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.