AT5G10760

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
3400322 .. 3402389
2068 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G10760.1

Sequence Viewer

Length: 1395 bp
ATGAGCATAATGAGGAATTTCTTGAGTATGATAATTATGCTTTGCGTATGTCTCAATTGGTGTTTTGCTGAAGGAGCTGAGAAAAGCGATAGTGGAAAGGTACTTGATTCTTACACCATTCAAGTCAGCTCTCTGTTCCCTTCATCATCATCTTGTGTCCCTTCTTCAAAAGCATCTAATACCAAGTCGTCGCTGCGCGTGGTGCACATGCATGGTGCGTGCTCGCATCTTAGCAGCGATGCGAGAGTCGACCATGACGAAATCATCAGACGCGATCAAGCACGTGTGGAGTCCATCTACTCAAAATTGTCAAAGAATAGCGCAAATGAAGTCAGCGAAGCCAAGTCAACGGAGCTACCGGCTAAAAGTGGAATCACACTCGGATCAGGAAACTACATCGTAACAATCGGAATCGGGACACCGAAGCACGATCTATCGCTGGTCTTCGACACCGGAAGTGACCTGACATGGACTCAATGTGAGCCATGTCTAGGAAGTTGCTATTCACAAAAGGAACCAAAATTTAACCCTTCTTCGTCTTCTACTTACCAAAACGTCTCGTGCTCATCTCCAATGTGTGAAGACGCTGAGAGTTGTTCGGCTTCCAACTGCGTATACAGTATCGTTTACGGCGATAAGTCGTTTACCCAAGGATTTCTTGCAAAGGAGAAATTTACCCTAACGAACTCTGATGTTTTGGAGGATGTTTACTTTGGTTGCGGTGAAAACAACCAAGGACTTTTCGACGGTGTTGCTGGGCTTCTCGGCCTTGGCCCTGGCAAACTCTCACTACCGGCGCAAACAACAACGACCTACAACAATATCTTCTCCTACTGTCTACCTTCTTTCACAAGTAACAGTACTGGCCATCTTACCTTTGGATCCGCTGGAATCTCTGAATCCGTTAAATTCACACCGATTTCTTCCTTCCCAAGCGCATTCAATTATGGCATCGATATCATAGGTATCAGTGTAGGCGACAAGGAATTAGCGATTACTCCAAACTCATTCTCGACCGAAGGTGCTATAATCGACTCAGGCACAGTGTTTACTCGCCTCCCTACCAAAGTCTACGCGGAACTCCGCAGTGTTTTTAAGGAAAAGATGTCGAGTTACAAGAGTACGTCGGGATACGGGCTTTTTGACACATGTTACGATTTCACTGGCTTGGATACGGTGACATACCCGACGATTGCATTCTCCTTCGCCGGTAGCACTGTCGTAGAACTTGATGGATCAGGGATTTCGTTGCCGATCAAGATATCACAGGTTTGTTTGGCGTTTGCAGGGAATGATGACCTTCCCGCCATCTTTGGAAACGTTCAGCAGACGACGCTAGATGTTGTGTACGACGTGGCTGGTGGACGAGTCGGTTTTGCTCCCAATGGTTGTTAA

Protein Analysis

464

Amino Acids

49.47

Weight (kDa)

4.89

Isoelectric Point (pI)

33.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 131 - 461 9.8e-24 Eukaryotic aspartyl protease
TAXi_N PF14543 132 - 295 1.8e-53 Xylanase inhibitor N-terminal
TAXi_C PF14541 315 - 460 4.1e-25 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0026675)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10760
pyrus_communis pycom16g00080

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 4 cut(s) 249, 615, 838, 1071
AccII CGCG 3 cut(s) 198, 273, 1076
AciI CCGC 5 cut(s) 720, 885, 1076, 1084, 1305
AclI AACGTT 1 cut(s) 1320
AclWI GGATC 4 cut(s) 391, 876, 889, 1243
AcoI YGGCCR 1 cut(s) 865
AcsI RAATTY 4 cut(s) 16, 521, 671, 908
AcuI CTGAAG 1 cut(s) 90
AcvI CACGTG 1 cut(s) 284
AfaI GTAC 4 cut(s) 102, 862, 1123, 1349
AfiI CCNNNNNNNGG 1 cut(s) 491
AflIII ACRYGT 2 cut(s) 283, 1148
AgsI TTSAA 3 cut(s) 122, 168, 943
AjiI CACGTC 1 cut(s) 1354
AjnI CCWGG 1 cut(s) 775
AluBI AGCT 3 cut(s) 77, 129, 355
AluI AGCT 3 cut(s) 77, 129, 355
Alw21I GWGCWC 3 cut(s) 207, 224, 566
Alw26I GTCTC 2 cut(s) 56, 562
Alw44I GTGCAC 1 cut(s) 203
AlwI GGATC 4 cut(s) 391, 876, 889, 1243
AoxI GGCC 3 cut(s) 766, 772, 865
ApaLI GTGCAC 1 cut(s) 203
ApeKI GCWGC 2 cut(s) 193, 234
ApoI RAATTY 4 cut(s) 16, 521, 671, 908
AspLEI GCGC 4 cut(s) 198, 323, 799, 938
AspS9I GGNCC 1 cut(s) 773
AsuHPI GGTGA 2 cut(s) 734, 1189
BaeGI GKGCMC 1 cut(s) 207
BalI TGGCCA 1 cut(s) 867
BamHI GGATCC 1 cut(s) 881
BauI CACGAG 1 cut(s) 559
BbrPI CACGTG 1 cut(s) 284
BbsI GAAGAC 3 cut(s) 436, 531, 588
Bbv12I GWGCWC 3 cut(s) 207, 224, 566
BbvI GCAGC 2 cut(s) 180, 246
BccI CCATC 4 cut(s) 302, 876, 1226, 1316
BceAI ACGGC 1 cut(s) 646
BcgI CGANNNNNNTGC 2 cut(s) 734, 768
BciT130I CCWGG 1 cut(s) 777
BciVI GTATCC 2 cut(s) 1124, 1165
BcoDI GTCTC 2 cut(s) 56, 562
BfaI CTAG 2 cut(s) 491, 1337
BfuI GTATCC 2 cut(s) 1124, 1165
BisI GCNGC 2 cut(s) 194, 235
BlsI GCNGC 2 cut(s) 195, 236
BmcAI AGTACT 1 cut(s) 862
Bme1390I CCNGG 1 cut(s) 777
BmgBI CACGTC 1 cut(s) 1354
BmgT120I GGNCC 1 cut(s) 773
BmiI GGNNCC 2 cut(s) 516, 883
BmrFI CCNGG 1 cut(s) 777
BmsI GCATC 4 cut(s) 182, 229, 235, 960
BpiI GAAGAC 3 cut(s) 436, 531, 588
BpuEI CTTGAG 1 cut(s) 43
Bsa29I ATCGAT 1 cut(s) 954
BsaAI YACGTR 1 cut(s) 284
BsaJI CCNNGG 4 cut(s) 649, 733, 769, 775
BsaWI WCCGGW 1 cut(s) 452
Bsc4I CCNNNNNNNGG 1 cut(s) 491
Bse118I RCCGGY 3 cut(s) 358, 793, 1208
Bse1I ACTGG 2 cut(s) 868, 1168
BseBI CCWGG 1 cut(s) 777
BseCI ATCGAT 1 cut(s) 954
BseDI CCNNGG 4 cut(s) 649, 733, 769, 775
BseGI GGATG 1 cut(s) 709
BseLI CCNNNNNNNGG 1 cut(s) 491
BseMII CTCAG 3 cut(s) 69, 579, 1050
BseNI ACTGG 2 cut(s) 868, 1168
BseSI GKGCMC 1 cut(s) 207
BseXI GCAGC 2 cut(s) 180, 246
BseYI CCCAGC 1 cut(s) 755
Bsh1236I CGCG 3 cut(s) 198, 273, 1076
Bsh1285I CGRYCG 1 cut(s) 1017
BshFI GGCC 3 cut(s) 768, 774, 867
BshVI ATCGAT 1 cut(s) 954
BsiEI CGRYCG 1 cut(s) 1017
BsiHKAI GWGCWC 3 cut(s) 207, 224, 566
BsiSI CCGG 4 cut(s) 359, 453, 794, 1209
BslFI GGGAC 2 cut(s) 143, 430
BslI CCNNNNNNNGG 1 cut(s) 491
BsmAI GTCTC 2 cut(s) 56, 562
BsmBI CGTCTC 1 cut(s) 562
BsmFI GGGAC 2 cut(s) 143, 430
BsmI GAATGC 2 cut(s) 938, 1196
BsnI GGCC 3 cut(s) 768, 774, 867
Bsp1286I GDGCHC 3 cut(s) 207, 224, 566
Bsp143I GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
BspACI CCGC 5 cut(s) 720, 885, 1076, 1084, 1305
BspANI GGCC 3 cut(s) 768, 774, 867
BspCNI CTCAG 3 cut(s) 70, 580, 1049
BspDI ATCGAT 1 cut(s) 954
BspFNI CGCG 3 cut(s) 198, 273, 1076
BspLI GGNNCC 2 cut(s) 516, 883
BspPI GGATC 4 cut(s) 391, 876, 889, 1243
BsrFI RCCGGY 3 cut(s) 358, 793, 1208
BsrI ACTGG 2 cut(s) 868, 1168
BssAI RCCGGY 3 cut(s) 358, 793, 1208
BssECI CCNNGG 4 cut(s) 649, 733, 769, 775
BssMI GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
BssNAI GTATAC 1 cut(s) 616
BssSI CACGAG 1 cut(s) 559
BssT1I CCWWGG 3 cut(s) 649, 733, 769
Bst1107I GTATAC 1 cut(s) 616
Bst2BI CACGAG 1 cut(s) 559
Bst2UI CCWGG 1 cut(s) 777
Bst4CI ACNGT 7 cut(s) 620, 749, 836, 860, 1045, 1177, 1219
BstBAI YACGTR 1 cut(s) 284
BstC8I GCNNGC 2 cut(s) 220, 224
BstDEI CTNAG 4 cut(s) 78, 230, 588, 1036
BstF5I GGATG 1 cut(s) 709
BstFNI CGCG 3 cut(s) 198, 273, 1076
BstHHI GCGC 4 cut(s) 198, 323, 799, 938
BstKTI GATC 6 cut(s) 277, 386, 433, 884, 1238, 1257
BstMAI GTCTC 2 cut(s) 56, 562
BstMBI GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
BstMCI CGRYCG 1 cut(s) 1017
BstMWI GCNNNNNNNGC 3 cut(s) 74, 202, 1333
BstNI CCWGG 1 cut(s) 777
BstNSI RCATGY 2 cut(s) 211, 1152
BstSCI CCNGG 1 cut(s) 775
BstSLI GKGCMC 1 cut(s) 207
BstUI CGCG 3 cut(s) 198, 273, 1076
BstV1I GCAGC 2 cut(s) 180, 246
BstV2I GAAGAC 3 cut(s) 436, 531, 588
BstX2I RGATCY 1 cut(s) 881
BstYI RGATCY 1 cut(s) 881
BstZ17I GTATAC 1 cut(s) 616
Bsu15I ATCGAT 1 cut(s) 954
BsuI GTATCC 2 cut(s) 1124, 1165
BsuRI GGCC 3 cut(s) 768, 774, 867
BsuTUI ATCGAT 1 cut(s) 954
BtgZI GCGATG 1 cut(s) 252
BtrI CACGTC 1 cut(s) 1354
BtsCI GGATG 1 cut(s) 709
BtsI GCAGTG 1 cut(s) 1093
BtsIMutI CAGTG 5 cut(s) 976, 1050, 1093, 1161, 1215
Cac8I GCNNGC 2 cut(s) 220, 224
CfoI GCGC 4 cut(s) 198, 323, 799, 938
Cfr10I RCCGGY 3 cut(s) 358, 793, 1208
Cfr13I GGNCC 1 cut(s) 773
ClaI ATCGAT 1 cut(s) 954
CseI GACGC 3 cut(s) 279, 593, 1342
Csp6I GTAC 4 cut(s) 101, 861, 1122, 1348
CviAII CATG 6 cut(s) 208, 212, 254, 468, 486, 1149
CviQI GTAC 4 cut(s) 101, 861, 1122, 1348
DdeI CTNAG 4 cut(s) 78, 230, 588, 1036
DpnI GATC 6 cut(s) 276, 385, 432, 883, 1237, 1256
DpnII GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
EaeI YGGCCR 1 cut(s) 865
Eco130I CCWWGG 3 cut(s) 649, 733, 769
Eco32I GATATC 2 cut(s) 958, 1263
Eco57I CTGAAG 1 cut(s) 90
Eco72I CACGTG 1 cut(s) 284
EcoRII CCWGG 1 cut(s) 775
EcoRV GATATC 2 cut(s) 958, 1263
EcoT14I CCWWGG 3 cut(s) 649, 733, 769
EcoT22I ATGCAT 1 cut(s) 213
ErhI CCWWGG 3 cut(s) 649, 733, 769
Esp3I CGTCTC 1 cut(s) 562
FaeI CATG 6 cut(s) 211, 215, 257, 471, 489, 1152
FalI AAGNNNNNCTT 2 cut(s) 642, 674
FaqI GGGAC 2 cut(s) 143, 430
FatI CATG 6 cut(s) 207, 211, 253, 467, 485, 1148
FauI CCCGC 1 cut(s) 1312
FblI GTMKAC 4 cut(s) 249, 615, 838, 1071
Fnu4HI GCNGC 2 cut(s) 194, 235
FokI GGATG 1 cut(s) 716
Fsp4HI GCNGC 2 cut(s) 194, 235
FspBI CTAG 2 cut(s) 491, 1337
GlaI GCGC 4 cut(s) 197, 322, 798, 937
GluI GCNGC 2 cut(s) 194, 235
GsaI CCCAGC 1 cut(s) 759
HaeIII GGCC 3 cut(s) 768, 774, 867
HapII CCGG 4 cut(s) 359, 453, 794, 1209
HgaI GACGC 3 cut(s) 279, 593, 1342
HhaI GCGC 4 cut(s) 198, 323, 799, 938
Hin1II CATG 6 cut(s) 211, 215, 257, 471, 489, 1152
Hin6I GCGC 4 cut(s) 196, 321, 797, 936
HinP1I GCGC 4 cut(s) 196, 321, 797, 936
HincII GTYRAC 2 cut(s) 250, 348
HindII GTYRAC 2 cut(s) 250, 348
HpaII CCGG 4 cut(s) 359, 453, 794, 1209
HphI GGTGA 2 cut(s) 734, 1189
Hpy188I TCNGA 5 cut(s) 269, 383, 410, 691, 898
Hpy188III TCNNGA 6 cut(s) 22, 387, 415, 1012, 1128, 1258
Hpy99I CGWCG 6 cut(s) 193, 749, 1129, 1192, 1336, 1355
HpyAV CCTTC 9 cut(s) 65, 150, 171, 540, 852, 937, 1013, 1213, 1310
HpyCH4III ACNGT 7 cut(s) 620, 749, 836, 860, 1045, 1177, 1219
HpyCH4IV ACGT 5 cut(s) 283, 555, 1124, 1320, 1353
HpyCH4V TGCA 5 cut(s) 205, 211, 662, 1196, 1286
HpyF10VI GCNNNNNNNGC 3 cut(s) 74, 202, 1333
HpyF3I CTNAG 4 cut(s) 78, 230, 588, 1036
HpySE526I ACGT 5 cut(s) 283, 555, 1124, 1320, 1353
Hsp92II CATG 6 cut(s) 211, 215, 257, 471, 489, 1152
HspAI GCGC 4 cut(s) 196, 321, 797, 936
Kzo9I GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
LmnI GCTCC 3 cut(s) 74, 352, 1384
Lsp1109I GCAGC 2 cut(s) 180, 246
LweI GCATC 4 cut(s) 182, 229, 235, 960
MaeI CTAG 2 cut(s) 491, 1337
MaeII ACGT 5 cut(s) 283, 555, 1124, 1320, 1353
MaeIII GTNAC 6 cut(s) 400, 458, 854, 1112, 1151, 1177
MalI GATC 6 cut(s) 276, 385, 432, 883, 1237, 1256
MboI GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
MboII GAAGA 7 cut(s) 156, 436, 525, 531, 593, 817, 915
MfeI CAATTG 1 cut(s) 55
MflI RGATCY 1 cut(s) 881
MhlI GDGCHC 3 cut(s) 207, 224, 566
MlsI TGGCCA 1 cut(s) 867
MluCI AATT 9 cut(s) 16, 33, 55, 305, 521, 671, 908, 943, 986
MluNI TGGCCA 1 cut(s) 867
MlyI GAGTC 5 cut(s) 255, 299, 466, 1028, 1377
MmeI TCCRAC 1 cut(s) 630
MnlI CCTC 3 cut(s) 6, 694, 1067
Mox20I TGGCCA 1 cut(s) 867
Mph1103I ATGCAT 1 cut(s) 213
MscI TGGCCA 1 cut(s) 867
MseI TTAA 4 cut(s) 525, 906, 1095, 1393
MslI CAYNNNNRTG 1 cut(s) 210
Msp20I TGGCCA 1 cut(s) 867
MspA1I CMGCKG 1 cut(s) 887
MspI CCGG 4 cut(s) 359, 453, 794, 1209
MspR9I CCNGG 1 cut(s) 777
MunI CAATTG 1 cut(s) 55
Mva1269I GAATGC 2 cut(s) 938, 1196
MvaI CCWGG 1 cut(s) 777
MvnI CGCG 3 cut(s) 198, 273, 1076
MwoI GCNNNNNNNGC 3 cut(s) 74, 202, 1333
NdeII GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
NlaIII CATG 6 cut(s) 211, 215, 257, 471, 489, 1152
NlaIV GGNNCC 2 cut(s) 516, 883
NmeAIII GCCGAG 1 cut(s) 744
NmuCI GTSAC 2 cut(s) 458, 1177
NsiI ATGCAT 1 cut(s) 213
NspI RCATGY 2 cut(s) 211, 1152
PciI ACATGT 1 cut(s) 1148
PcsI WCGNNNNNNNCGW 2 cut(s) 255, 630
PctI GAATGC 2 cut(s) 938, 1196
PfeI GAWTC 5 cut(s) 107, 372, 411, 891, 899
PkrI GCNGC 2 cut(s) 195, 236
PleI GAGTC 5 cut(s) 254, 298, 466, 1028, 1376
PmaCI CACGTG 1 cut(s) 284
PmlI CACGTG 1 cut(s) 284
PpsI GAGTC 5 cut(s) 254, 298, 466, 1028, 1376
Ppu21I YACGTR 1 cut(s) 284
PscI ACATGT 1 cut(s) 1148
Psp1406I AACGTT 1 cut(s) 1320
Psp6I CCWGG 1 cut(s) 775
PspCI CACGTG 1 cut(s) 284
PspFI CCCAGC 1 cut(s) 755
PspGI CCWGG 1 cut(s) 775
PspN4I GGNNCC 2 cut(s) 516, 883
PspPI GGNCC 1 cut(s) 773
PsuI RGATCY 1 cut(s) 881
RsaI GTAC 4 cut(s) 102, 862, 1123, 1349
RsaNI GTAC 4 cut(s) 101, 861, 1122, 1348
RseI CAYNNNNRTG 1 cut(s) 210
SalI GTCGAC 1 cut(s) 248
SaqAI TTAA 4 cut(s) 525, 906, 1095, 1393
SatI GCNGC 2 cut(s) 194, 235
Sau3AI GATC 6 cut(s) 274, 383, 430, 881, 1235, 1254
Sau96I GGNCC 1 cut(s) 773
ScaI AGTACT 1 cut(s) 862
SchI GAGTC 5 cut(s) 255, 299, 466, 1028, 1377
ScrFI CCNGG 1 cut(s) 777
SduI GDGCHC 3 cut(s) 207, 224, 566
SfaNI GCATC 4 cut(s) 182, 229, 235, 960
SmiMI CAYNNNNRTG 1 cut(s) 210
SmlI CTYRAG 1 cut(s) 22
SmoI CTYRAG 1 cut(s) 22
Sse9I AATT 9 cut(s) 16, 33, 55, 305, 521, 671, 908, 943, 986
SsiI CCGC 5 cut(s) 720, 885, 1076, 1084, 1305
SspMI CTAG 2 cut(s) 491, 1337
StyD4I CCNGG 1 cut(s) 775
StyI CCWWGG 3 cut(s) 649, 733, 769
TaaI ACNGT 7 cut(s) 620, 749, 836, 860, 1045, 1177, 1219
TaiI ACGT 5 cut(s) 286, 558, 1127, 1323, 1356
TaqI TCGA 7 cut(s) 249, 447, 744, 954, 1013, 1032, 1109
TaqII GACCGA 1 cut(s) 1031
TasI AATT 9 cut(s) 16, 33, 55, 305, 521, 671, 908, 943, 986
TatI WGTACW 1 cut(s) 860
TfiI GAWTC 5 cut(s) 107, 372, 411, 891, 899
Tru1I TTAA 4 cut(s) 525, 906, 1095, 1393
Tru9I TTAA 4 cut(s) 525, 906, 1095, 1393
TscAI CASTG 5 cut(s) 976, 1050, 1093, 1168, 1222
TseFI GTSAC 2 cut(s) 458, 1177
TseI GCWGC 2 cut(s) 193, 234
Tsp45I GTSAC 2 cut(s) 458, 1177
TspDTI ATGAA 2 cut(s) 132, 342
TspGWI ACGGA 2 cut(s) 365, 892
TspRI CASTG 5 cut(s) 976, 1050, 1093, 1168, 1222
VneI GTGCAC 1 cut(s) 203
XapI RAATTY 4 cut(s) 16, 521, 671, 908
XceI RCATGY 2 cut(s) 211, 1152
XcmI CCANNNNNNNNNTGG 1 cut(s) 875
XmiI GTMKAC 4 cut(s) 249, 615, 838, 1071
XspI CTAG 2 cut(s) 491, 1337
ZrmI AGTACT 1 cut(s) 862
Zsp2I ATGCAT 1 cut(s) 213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.