Chloroplastic group IIA intron splicing facilitator CRS1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G16180 AT5G16180 |
| malus_domestica | MD09G1254900.v1.1 |
| prunus_persica | Prupe.3G145000_v2.0.a1 |
| pyrus_communis | pycom09g17080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 683 |
| Acc36I | ACCTGC | 1 cut(s) | 683 |
| AccI | GTMKAC | 2 cut(s) | 1816, 1887 |
| AccII | CGCG | 4 cut(s) | 142, 183, 1364, 1428 |
| AciI | CCGC | 4 cut(s) | 531, 1179, 1290, 1364 |
| AclI | AACGTT | 1 cut(s) | 417 |
| AcsI | RAATTY | 3 cut(s) | 476, 1529, 1669 |
| AcuI | CTGAAG | 6 cut(s) | 64, 468, 1041, 1584, 1775, 2102 |
| AfaI | GTAC | 3 cut(s) | 923, 1326, 1926 |
| AfeI | AGCGCT | 1 cut(s) | 1902 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1691 |
| AjiI | CACGTC | 1 cut(s) | 650 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2117, 2149 |
| Alw21I | GWGCWC | 2 cut(s) | 799, 1240 |
| Alw26I | GTCTC | 3 cut(s) | 232, 640, 1553 |
| Ama87I | CYCGRG | 1 cut(s) | 1546 |
| Aor51HI | AGCGCT | 1 cut(s) | 1902 |
| ApeKI | GCWGC | 3 cut(s) | 236, 1767, 2065 |
| ApoI | RAATTY | 3 cut(s) | 476, 1529, 1669 |
| AscI | GGCGCGCC | 1 cut(s) | 181 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 347, 1871 |
| AspLEI | GCGC | 4 cut(s) | 142, 183, 185, 1903 |
| AspS9I | GGNCC | 4 cut(s) | 272, 875, 959, 1543 |
| AsuHPI | GGTGA | 3 cut(s) | 688, 769, 2140 |
| AsuII | TTCGAA | 1 cut(s) | 659 |
| AvaI | CYCGRG | 1 cut(s) | 1546 |
| AvaII | GGWCC | 4 cut(s) | 272, 875, 959, 1543 |
| BaeGI | GKGCMC | 1 cut(s) | 1959 |
| BanII | GRGCYC | 2 cut(s) | 799, 1240 |
| BbsI | GAAGAC | 3 cut(s) | 350, 824, 994 |
| Bbv12I | GWGCWC | 2 cut(s) | 799, 1240 |
| BbvI | GCAGC | 3 cut(s) | 223, 1779, 2077 |
| BccI | CCATC | 6 cut(s) | 160, 454, 944, 1054, 1693, 2005 |
| BclI | TGATCA | 3 cut(s) | 159, 202, 1854 |
| BcoDI | GTCTC | 3 cut(s) | 232, 640, 1553 |
| BfaI | CTAG | 5 cut(s) | 963, 1050, 1071, 1556, 1583 |
| BfoI | RGCGCY | 1 cut(s) | 1904 |
| BfuAI | ACCTGC | 1 cut(s) | 683 |
| BisI | GCNGC | 3 cut(s) | 237, 1768, 2066 |
| BlpI | GCTNAGC | 2 cut(s) | 609, 1077 |
| BlsI | GCNGC | 3 cut(s) | 238, 1769, 2067 |
| BmcAI | AGTACT | 2 cut(s) | 1326, 1926 |
| Bme18I | GGWCC | 4 cut(s) | 272, 875, 959, 1543 |
| BmeT110I | CYCGRG | 1 cut(s) | 1546 |
| BmgBI | CACGTC | 1 cut(s) | 650 |
| BmgT120I | GGNCC | 4 cut(s) | 272, 875, 959, 1543 |
| BmiI | GGNNCC | 3 cut(s) | 249, 960, 1545 |
| BmsI | GCATC | 4 cut(s) | 223, 994, 1851, 2052 |
| BpiI | GAAGAC | 3 cut(s) | 350, 824, 994 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 896, 928 |
| BpmI | CTGGAG | 2 cut(s) | 843, 1861 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 609, 1077 |
| Bpu14I | TTCGAA | 1 cut(s) | 659 |
| BpuEI | CTTGAG | 3 cut(s) | 783, 1126, 1759 |
| Bsa29I | ATCGAT | 1 cut(s) | 728 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1223 |
| BsaJI | CCNNGG | 6 cut(s) | 260, 326, 516, 542, 1144, 1975 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 816, 846 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1691 |
| Bse1I | ACTGG | 3 cut(s) | 826, 951, 1291 |
| Bse3DI | GCAATG | 3 cut(s) | 1113, 1924, 2042 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1223 |
| BseCI | ATCGAT | 1 cut(s) | 728 |
| BseDI | CCNNGG | 6 cut(s) | 260, 326, 516, 542, 1144, 1975 |
| BseGI | GGATG | 5 cut(s) | 270, 469, 585, 955, 987 |
| BseJI | GATNNNNATC | 1 cut(s) | 1223 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1691 |
| BseMI | GCAATG | 3 cut(s) | 1113, 1924, 2042 |
| BseMII | CTCAG | 5 cut(s) | 600, 635, 693, 1408, 1560 |
| BseNI | ACTGG | 3 cut(s) | 826, 951, 1291 |
| BsePI | GCGCGC | 1 cut(s) | 181 |
| BseRI | GAGGAG | 4 cut(s) | 237, 515, 885, 1803 |
| BseSI | GKGCMC | 1 cut(s) | 1959 |
| BseXI | GCAGC | 3 cut(s) | 223, 1779, 2077 |
| Bsh1236I | CGCG | 4 cut(s) | 142, 183, 1364, 1428 |
| BshVI | ATCGAT | 1 cut(s) | 728 |
| BsiHKAI | GWGCWC | 2 cut(s) | 799, 1240 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1546 |
| BslFI | GGGAC | 2 cut(s) | 909, 972 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1691 |
| BsmAI | GTCTC | 3 cut(s) | 232, 640, 1553 |
| BsmBI | CGTCTC | 1 cut(s) | 640 |
| BsmFI | GGGAC | 2 cut(s) | 909, 972 |
| BsmI | GAATGC | 1 cut(s) | 1739 |
| BsoBI | CYCGRG | 1 cut(s) | 1546 |
| Bsp119I | TTCGAA | 1 cut(s) | 659 |
| Bsp1286I | GDGCHC | 3 cut(s) | 799, 1240, 1959 |
| Bsp143I | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 609, 1077 |
| Bsp19I | CCATGG | 2 cut(s) | 260, 542 |
| BspACI | CCGC | 4 cut(s) | 531, 1179, 1290, 1364 |
| BspCNI | CTCAG | 5 cut(s) | 601, 636, 694, 1407, 1561 |
| BspDI | ATCGAT | 1 cut(s) | 728 |
| BspFNI | CGCG | 4 cut(s) | 142, 183, 1364, 1428 |
| BspLI | GGNNCC | 3 cut(s) | 249, 960, 1545 |
| BspMI | ACCTGC | 1 cut(s) | 683 |
| BspQI | GCTCTTC | 1 cut(s) | 1086 |
| BspT104I | TTCGAA | 1 cut(s) | 659 |
| BsrDI | GCAATG | 3 cut(s) | 1113, 1924, 2042 |
| BsrI | ACTGG | 3 cut(s) | 826, 951, 1291 |
| BssECI | CCNNGG | 6 cut(s) | 260, 326, 516, 542, 1144, 1975 |
| BssHII | GCGCGC | 1 cut(s) | 181 |
| BssMI | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| BssT1I | CCWWGG | 4 cut(s) | 260, 516, 542, 1144 |
| Bst4CI | ACNGT | 4 cut(s) | 993, 1131, 1473, 1976 |
| Bst6I | CTCTTC | 7 cut(s) | 134, 175, 308, 333, 552, 1086, 1780 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1220 |
| BstBI | TTCGAA | 1 cut(s) | 659 |
| BstC8I | GCNNGC | 5 cut(s) | 144, 183, 750, 795, 1959 |
| BstDEI | CTNAG | 8 cut(s) | 309, 609, 644, 702, 1077, 1394, 1569, 1771 |
| BstDSI | CCRYGG | 4 cut(s) | 260, 326, 542, 1975 |
| BstF5I | GGATG | 5 cut(s) | 270, 469, 585, 955, 987 |
| BstFNI | CGCG | 4 cut(s) | 142, 183, 1364, 1428 |
| BstH2I | RGCGCY | 1 cut(s) | 1904 |
| BstHHI | GCGC | 4 cut(s) | 142, 183, 185, 1903 |
| BstKTI | GATC | 5 cut(s) | 162, 205, 408, 1857, 2054 |
| BstMAI | GTCTC | 3 cut(s) | 232, 640, 1553 |
| BstMBI | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1220, 1574, 1831 |
| BstSLI | GKGCMC | 1 cut(s) | 1959 |
| BstUI | CGCG | 4 cut(s) | 142, 183, 1364, 1428 |
| BstV1I | GCAGC | 3 cut(s) | 223, 1779, 2077 |
| BstV2I | GAAGAC | 3 cut(s) | 350, 824, 994 |
| Bsu15I | ATCGAT | 1 cut(s) | 728 |
| BsuTUI | ATCGAT | 1 cut(s) | 728 |
| BtgI | CCRYGG | 4 cut(s) | 260, 326, 542, 1975 |
| BtgZI | GCGATG | 1 cut(s) | 410 |
| BtrI | CACGTC | 1 cut(s) | 650 |
| BtsCI | GGATG | 5 cut(s) | 270, 469, 585, 955, 987 |
| BtsIMutI | CAGTG | 2 cut(s) | 1284, 2078 |
| BveI | ACCTGC | 1 cut(s) | 683 |
| Cac8I | GCNNGC | 5 cut(s) | 144, 183, 750, 795, 1959 |
| CfoI | GCGC | 4 cut(s) | 142, 183, 185, 1903 |
| Cfr13I | GGNCC | 4 cut(s) | 272, 875, 959, 1543 |
| ClaI | ATCGAT | 1 cut(s) | 728 |
| Csp6I | GTAC | 3 cut(s) | 922, 1325, 1925 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 21, 56 |
| CviAII | CATG | 3 cut(s) | 261, 543, 787 |
| CviQI | GTAC | 3 cut(s) | 922, 1325, 1925 |
| DdeI | CTNAG | 8 cut(s) | 309, 609, 644, 702, 1077, 1394, 1569, 1771 |
| DpnI | GATC | 5 cut(s) | 161, 204, 407, 1856, 2053 |
| DpnII | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| DraI | TTTAAA | 1 cut(s) | 1663 |
| Eam1104I | CTCTTC | 7 cut(s) | 134, 175, 308, 333, 552, 1086, 1780 |
| EarI | CTCTTC | 7 cut(s) | 134, 175, 308, 333, 552, 1086, 1780 |
| Ecl136II | GAGCTC | 2 cut(s) | 797, 1238 |
| Eco130I | CCWWGG | 4 cut(s) | 260, 516, 542, 1144 |
| Eco24I | GRGCYC | 2 cut(s) | 799, 1240 |
| Eco47I | GGWCC | 4 cut(s) | 272, 875, 959, 1543 |
| Eco47III | AGCGCT | 1 cut(s) | 1902 |
| Eco53kI | GAGCTC | 2 cut(s) | 797, 1238 |
| Eco57I | CTGAAG | 6 cut(s) | 64, 468, 1041, 1584, 1775, 2102 |
| Eco88I | CYCGRG | 1 cut(s) | 1546 |
| EcoICRI | GAGCTC | 2 cut(s) | 797, 1238 |
| EcoO109I | RGGNCCY | 2 cut(s) | 272, 959 |
| EcoRI | GAATTC | 1 cut(s) | 476 |
| EcoT14I | CCWWGG | 4 cut(s) | 260, 516, 542, 1144 |
| EcoT38I | GRGCYC | 2 cut(s) | 799, 1240 |
| ErhI | CCWWGG | 4 cut(s) | 260, 516, 542, 1144 |
| Esp3I | CGTCTC | 1 cut(s) | 640 |
| FaeI | CATG | 3 cut(s) | 264, 546, 790 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1483, 1515 |
| FaqI | GGGAC | 2 cut(s) | 909, 972 |
| FatI | CATG | 3 cut(s) | 260, 542, 786 |
| FauI | CCCGC | 1 cut(s) | 524 |
| FbaI | TGATCA | 3 cut(s) | 159, 202, 1854 |
| FblI | GTMKAC | 2 cut(s) | 1816, 1887 |
| Fnu4HI | GCNGC | 3 cut(s) | 237, 1768, 2066 |
| FokI | GGATG | 5 cut(s) | 277, 476, 592, 962, 994 |
| FriOI | GRGCYC | 2 cut(s) | 799, 1240 |
| Fsp4HI | GCNGC | 3 cut(s) | 237, 1768, 2066 |
| FspBI | CTAG | 5 cut(s) | 963, 1050, 1071, 1556, 1583 |
| GlaI | GCGC | 4 cut(s) | 141, 182, 184, 1902 |
| GluI | GCNGC | 3 cut(s) | 237, 1768, 2066 |
| GsuI | CTGGAG | 2 cut(s) | 843, 1861 |
| HaeII | RGCGCY | 1 cut(s) | 1904 |
| HhaI | GCGC | 4 cut(s) | 142, 183, 185, 1903 |
| Hin1II | CATG | 3 cut(s) | 264, 546, 790 |
| Hin6I | GCGC | 4 cut(s) | 140, 181, 183, 1901 |
| HinP1I | GCGC | 4 cut(s) | 140, 181, 183, 1901 |
| HindIII | AAGCTT | 3 cut(s) | 654, 1613, 1868 |
| HphI | GGTGA | 3 cut(s) | 688, 769, 2140 |
| Hpy166II | GTNNAC | 4 cut(s) | 1061, 1469, 1817, 1888 |
| Hpy8I | GTNNAC | 4 cut(s) | 1061, 1469, 1817, 1888 |
| HpyAV | CCTTC | 8 cut(s) | 580, 841, 1471, 1582, 1805, 1946, 2007, 2119 |
| HpyCH4III | ACNGT | 4 cut(s) | 993, 1131, 1473, 1976 |
| HpyCH4IV | ACGT | 5 cut(s) | 347, 417, 649, 1054, 1993 |
| HpyCH4V | TGCA | 7 cut(s) | 100, 1214, 1223, 1522, 1864, 2047, 2065 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1220, 1574, 1831 |
| HpyF3I | CTNAG | 8 cut(s) | 309, 609, 644, 702, 1077, 1394, 1569, 1771 |
| HpySE526I | ACGT | 5 cut(s) | 347, 417, 649, 1054, 1993 |
| Hsp92II | CATG | 3 cut(s) | 264, 546, 790 |
| HspAI | GCGC | 4 cut(s) | 140, 181, 183, 1901 |
| Ksp22I | TGATCA | 3 cut(s) | 159, 202, 1854 |
| Kzo9I | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| LguI | GCTCTTC | 1 cut(s) | 1086 |
| LmnI | GCTCC | 3 cut(s) | 262, 790, 1235 |
| LpnPI | CCDG | 9 cut(s) | 470, 678, 807, 932, 1032, 1272, 1822, 1891, 2111 |
| Lsp1109I | GCAGC | 3 cut(s) | 223, 1779, 2077 |
| LweI | GCATC | 4 cut(s) | 223, 994, 1851, 2052 |
| MaeI | CTAG | 5 cut(s) | 963, 1050, 1071, 1556, 1583 |
| MaeII | ACGT | 5 cut(s) | 347, 417, 649, 1054, 1993 |
| MaeIII | GTNAC | 5 cut(s) | 74, 413, 697, 942, 1456 |
| MalI | GATC | 5 cut(s) | 161, 204, 407, 1856, 2053 |
| MboI | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| MhlI | GDGCHC | 3 cut(s) | 799, 1240, 1959 |
| MluCI | AATT | 7 cut(s) | 197, 476, 495, 1271, 1529, 1664, 1669 |
| MlyI | GAGTC | 6 cut(s) | 234, 521, 1036, 1800, 2064, 2144 |
| MmeI | TCCRAC | 1 cut(s) | 623 |
| MroXI | GAANNNNTTC | 2 cut(s) | 347, 1871 |
| MseI | TTAA | 8 cut(s) | 243, 572, 723, 839, 1029, 1662, 1667, 1947 |
| Mva1269I | GAATGC | 1 cut(s) | 1739 |
| MvnI | CGCG | 4 cut(s) | 142, 183, 1364, 1428 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1220, 1574, 1831 |
| NcoI | CCATGG | 2 cut(s) | 260, 542 |
| NdeII | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| NlaIII | CATG | 3 cut(s) | 264, 546, 790 |
| NlaIV | GGNNCC | 3 cut(s) | 249, 960, 1545 |
| NmeAIII | GCCGAG | 3 cut(s) | 116, 157, 2052 |
| NspV | TTCGAA | 1 cut(s) | 659 |
| PalAI | GGCGCGCC | 1 cut(s) | 181 |
| PaqCI | CACCTGC | 1 cut(s) | 683 |
| PauI | GCGCGC | 1 cut(s) | 181 |
| PciSI | GCTCTTC | 1 cut(s) | 1086 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 353, 414 |
| PctI | GAATGC | 1 cut(s) | 1739 |
| PdmI | GAANNNNTTC | 2 cut(s) | 347, 1871 |
| PfeI | GAWTC | 5 cut(s) | 298, 361, 443, 1300, 2020 |
| PflFI | GACNNNGTC | 1 cut(s) | 1056 |
| PkrI | GCNGC | 3 cut(s) | 238, 1769, 2067 |
| PleI | GAGTC | 6 cut(s) | 233, 520, 1036, 1799, 2064, 2144 |
| PpsI | GAGTC | 6 cut(s) | 233, 520, 1036, 1799, 2064, 2144 |
| PpuMI | RGGWCCY | 2 cut(s) | 272, 959 |
| Psp124BI | GAGCTC | 2 cut(s) | 799, 1240 |
| Psp1406I | AACGTT | 1 cut(s) | 417 |
| Psp5II | RGGWCCY | 2 cut(s) | 272, 959 |
| PspN4I | GGNNCC | 3 cut(s) | 249, 960, 1545 |
| PspPI | GGNCC | 4 cut(s) | 272, 875, 959, 1543 |
| PspPPI | RGGWCCY | 2 cut(s) | 272, 959 |
| PsyI | GACNNNGTC | 1 cut(s) | 1056 |
| PteI | GCGCGC | 1 cut(s) | 181 |
| RsaI | GTAC | 3 cut(s) | 923, 1326, 1926 |
| RsaNI | GTAC | 3 cut(s) | 922, 1325, 1925 |
| SacI | GAGCTC | 2 cut(s) | 799, 1240 |
| SapI | GCTCTTC | 1 cut(s) | 1086 |
| SaqAI | TTAA | 8 cut(s) | 243, 572, 723, 839, 1029, 1662, 1667, 1947 |
| SatI | GCNGC | 3 cut(s) | 237, 1768, 2066 |
| Sau3AI | GATC | 5 cut(s) | 159, 202, 405, 1854, 2051 |
| Sau96I | GGNCC | 4 cut(s) | 272, 875, 959, 1543 |
| ScaI | AGTACT | 2 cut(s) | 1326, 1926 |
| SchI | GAGTC | 6 cut(s) | 234, 521, 1036, 1800, 2064, 2144 |
| SduI | GDGCHC | 3 cut(s) | 799, 1240, 1959 |
| SfaNI | GCATC | 4 cut(s) | 223, 994, 1851, 2052 |
| SfuI | TTCGAA | 1 cut(s) | 659 |
| SgsI | GGCGCGCC | 1 cut(s) | 181 |
| SinI | GGWCC | 4 cut(s) | 272, 875, 959, 1543 |
| SmlI | CTYRAG | 3 cut(s) | 798, 1105, 1738 |
| SmoI | CTYRAG | 3 cut(s) | 798, 1105, 1738 |
| Sse9I | AATT | 7 cut(s) | 197, 476, 495, 1271, 1529, 1664, 1669 |
| SsiI | CCGC | 4 cut(s) | 531, 1179, 1290, 1364 |
| SspI | AATATT | 1 cut(s) | 19 |
| SspMI | CTAG | 5 cut(s) | 963, 1050, 1071, 1556, 1583 |
| SstI | GAGCTC | 2 cut(s) | 799, 1240 |
| StyI | CCWWGG | 4 cut(s) | 260, 516, 542, 1144 |
| TaaI | ACNGT | 4 cut(s) | 993, 1131, 1473, 1976 |
| TaiI | ACGT | 5 cut(s) | 350, 420, 652, 1057, 1996 |
| TaqII | GACCGA | 1 cut(s) | 892 |
| TasI | AATT | 7 cut(s) | 197, 476, 495, 1271, 1529, 1664, 1669 |
| TatI | WGTACW | 2 cut(s) | 1324, 1924 |
| TfiI | GAWTC | 5 cut(s) | 298, 361, 443, 1300, 2020 |
| Tru1I | TTAA | 8 cut(s) | 243, 572, 723, 839, 1029, 1662, 1667, 1947 |
| Tru9I | TTAA | 8 cut(s) | 243, 572, 723, 839, 1029, 1662, 1667, 1947 |
| TscAI | CASTG | 2 cut(s) | 1291, 2085 |
| TseI | GCWGC | 3 cut(s) | 236, 1767, 2065 |
| TspGWI | ACGGA | 1 cut(s) | 343 |
| TspRI | CASTG | 2 cut(s) | 1291, 2085 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1056 |
| VpaK11BI | GGWCC | 4 cut(s) | 272, 875, 959, 1543 |
| XapI | RAATTY | 3 cut(s) | 476, 1529, 1669 |
| XbaI | TCTAGA | 1 cut(s) | 1049 |
| XmiI | GTMKAC | 2 cut(s) | 1816, 1887 |
| XmnI | GAANNNNTTC | 2 cut(s) | 347, 1871 |
| XspI | CTAG | 5 cut(s) | 963, 1050, 1071, 1556, 1583 |
| ZrmI | AGTACT | 2 cut(s) | 1326, 1926 |