exocyst complex component
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G59730 AT5G59730 |
| fragaria_vesca | FvH4_3g34720 |
| malus_domestica | MD11G1116300.v1.1 |
| prunus_persica | Prupe.6G086700_v2.0.a1 |
| pyrus_communis | pycom11g09770 |
| rosa_chinensis | RchiOBHm_Chr5g0062431 |
| rosa_laevigata | RLG00000035557 |
| rosa_multiflora | Rmu_co8397283.1_g000001 Rmu_co8435199.1_g000001 Rmu_sc0005277.1_g000014 |
| rosa_rugosa | Rorug05G0349500 |
| rosa_samantha | Rh5AG408500 Rh5BG423600 Rh5CG447400 Rh5DG438200 |
| rosa_wichuraiana | Rw5G038580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 570 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1896 |
| AatII | GACGTC | 1 cut(s) | 1589 |
| AccI | GTMKAC | 1 cut(s) | 1397 |
| AccII | CGCG | 1 cut(s) | 65 |
| AccIII | TCCGGA | 5 cut(s) | 868, 1234, 1838, 1844, 1850 |
| AciI | CCGC | 5 cut(s) | 65, 962, 1215, 1218, 1887 |
| AclWI | GGATC | 9 cut(s) | 347, 1248, 1788, 1830, 1836, 1842, 1843, 1849, 1855 |
| AcuI | CTGAAG | 2 cut(s) | 1424, 1776 |
| AcyI | GRCGYC | 2 cut(s) | 1187, 1586 |
| AfaI | GTAC | 7 cut(s) | 372, 400, 579, 1266, 1592, 1681, 1870 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 253, 1073 |
| AgeI | ACCGGT | 1 cut(s) | 1701 |
| AgsI | TTSAA | 5 cut(s) | 80, 631, 782, 932, 1570 |
| AhlI | ACTAGT | 1 cut(s) | 413 |
| Alw26I | GTCTC | 7 cut(s) | 370, 424, 593, 1257, 1264, 1413, 1577 |
| AlwI | GGATC | 9 cut(s) | 347, 1248, 1788, 1830, 1836, 1842, 1843, 1849, 1855 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 959 |
| Aor13HI | TCCGGA | 5 cut(s) | 868, 1234, 1838, 1844, 1850 |
| ApeKI | GCWGC | 5 cut(s) | 131, 604, 956, 959, 1151 |
| AsiGI | ACCGGT | 1 cut(s) | 1701 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1858 |
| AspS9I | GGNCC | 1 cut(s) | 1636 |
| AsuC2I | CCSGG | 1 cut(s) | 836 |
| AsuHPI | GGTGA | 4 cut(s) | 743, 988, 1291, 1462 |
| AsuII | TTCGAA | 3 cut(s) | 948, 1032, 1161 |
| AvaII | GGWCC | 1 cut(s) | 1636 |
| BamHI | GGATCC | 3 cut(s) | 1835, 1841, 1847 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 251, 283 |
| BauI | CACGAG | 1 cut(s) | 1881 |
| BbsI | GAAGAC | 2 cut(s) | 438, 1067 |
| BbvI | GCAGC | 5 cut(s) | 118, 591, 943, 946, 1138 |
| BccI | CCATC | 1 cut(s) | 1154 |
| BceAI | ACGGC | 3 cut(s) | 185, 1174, 1306 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 938, 972, 1174, 1208 |
| BclI | TGATCA | 1 cut(s) | 748 |
| BcnI | CCSGG | 1 cut(s) | 836 |
| BcoDI | GTCTC | 7 cut(s) | 370, 424, 593, 1257, 1264, 1413, 1577 |
| BcuI | ACTAGT | 1 cut(s) | 413 |
| BfaI | CTAG | 3 cut(s) | 414, 993, 1797 |
| BglII | AGATCT | 1 cut(s) | 968 |
| BisI | GCNGC | 7 cut(s) | 132, 605, 957, 960, 1152, 1216, 1219 |
| BlpI | GCTNAGC | 1 cut(s) | 1317 |
| BlsI | GCNGC | 7 cut(s) | 133, 606, 958, 961, 1153, 1217, 1220 |
| BmcAI | AGTACT | 1 cut(s) | 400 |
| Bme1390I | CCNGG | 1 cut(s) | 836 |
| Bme18I | GGWCC | 1 cut(s) | 1636 |
| BmgT120I | GGNCC | 1 cut(s) | 1636 |
| BmiI | GGNNCC | 4 cut(s) | 1637, 1837, 1843, 1849 |
| BmrFI | CCNGG | 1 cut(s) | 836 |
| BmsI | GCATC | 3 cut(s) | 213, 235, 994 |
| BoxI | GACNNNNGTC | 1 cut(s) | 416 |
| BpiI | GAAGAC | 2 cut(s) | 438, 1067 |
| Bpu10I | CCTNAGC | 3 cut(s) | 549, 1548, 1804 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1317 |
| Bpu14I | TTCGAA | 3 cut(s) | 948, 1032, 1161 |
| BpuEI | CTTGAG | 2 cut(s) | 494, 789 |
| BpuMI | CCSGG | 1 cut(s) | 836 |
| Bsa29I | ATCGAT | 1 cut(s) | 587 |
| BsaAI | YACGTR | 1 cut(s) | 1268 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1646, 1840, 1846 |
| BsaHI | GRCGYC | 2 cut(s) | 1187, 1586 |
| BsaI | GGTCTC | 1 cut(s) | 1264 |
| BsaJI | CCNNGG | 1 cut(s) | 252 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 863, 893, 1229, 1259 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 253, 1073 |
| Bse118I | RCCGGY | 2 cut(s) | 539, 1701 |
| Bse1I | ACTGG | 2 cut(s) | 1172, 1861 |
| Bse3DI | GCAATG | 1 cut(s) | 504 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1646, 1840, 1846 |
| BseAI | TCCGGA | 5 cut(s) | 868, 1234, 1838, 1844, 1850 |
| BseCI | ATCGAT | 1 cut(s) | 587 |
| BseDI | CCNNGG | 1 cut(s) | 252 |
| BseGI | GGATG | 4 cut(s) | 508, 1087, 1531, 1701 |
| BseJI | GATNNNNATC | 3 cut(s) | 1646, 1840, 1846 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 253, 1073 |
| BseMI | GCAATG | 1 cut(s) | 504 |
| BseMII | CTCAG | 5 cut(s) | 786, 986, 1166, 1331, 1818 |
| BseNI | ACTGG | 2 cut(s) | 1172, 1861 |
| BseRI | GAGGAG | 2 cut(s) | 18, 200 |
| BseXI | GCAGC | 5 cut(s) | 118, 591, 943, 946, 1138 |
| Bsh1236I | CGCG | 1 cut(s) | 65 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1394 |
| BshTI | ACCGGT | 1 cut(s) | 1701 |
| BshVI | ATCGAT | 1 cut(s) | 587 |
| BsiEI | CGRYCG | 1 cut(s) | 1394 |
| BsiWI | CGTACG | 1 cut(s) | 577 |
| BslFI | GGGAC | 1 cut(s) | 1649 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 253, 1073 |
| BsmAI | GTCTC | 7 cut(s) | 370, 424, 593, 1257, 1264, 1413, 1577 |
| BsmBI | CGTCTC | 4 cut(s) | 593, 1257, 1413, 1577 |
| BsmFI | GGGAC | 1 cut(s) | 1649 |
| BsmI | GAATGC | 1 cut(s) | 560 |
| Bso31I | GGTCTC | 1 cut(s) | 1264 |
| Bsp119I | TTCGAA | 3 cut(s) | 948, 1032, 1161 |
| Bsp13I | TCCGGA | 5 cut(s) | 868, 1234, 1838, 1844, 1850 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1317 |
| BspACI | CCGC | 5 cut(s) | 65, 962, 1215, 1218, 1887 |
| BspCNI | CTCAG | 5 cut(s) | 787, 985, 1167, 1330, 1817 |
| BspDI | ATCGAT | 1 cut(s) | 587 |
| BspEI | TCCGGA | 5 cut(s) | 868, 1234, 1838, 1844, 1850 |
| BspFNI | CGCG | 1 cut(s) | 65 |
| BspLI | GGNNCC | 4 cut(s) | 1637, 1837, 1843, 1849 |
| BspPI | GGATC | 9 cut(s) | 347, 1248, 1788, 1830, 1836, 1842, 1843, 1849, 1855 |
| BspQI | GCTCTTC | 1 cut(s) | 459 |
| BspT104I | TTCGAA | 3 cut(s) | 948, 1032, 1161 |
| BspTNI | GGTCTC | 1 cut(s) | 1264 |
| BsrDI | GCAATG | 1 cut(s) | 504 |
| BsrFI | RCCGGY | 2 cut(s) | 539, 1701 |
| BsrI | ACTGG | 2 cut(s) | 1172, 1861 |
| BssAI | RCCGGY | 2 cut(s) | 539, 1701 |
| BssECI | CCNNGG | 1 cut(s) | 252 |
| BssNI | GRCGYC | 2 cut(s) | 1187, 1586 |
| BssSI | CACGAG | 1 cut(s) | 1881 |
| Bst2BI | CACGAG | 1 cut(s) | 1881 |
| Bst4CI | ACNGT | 6 cut(s) | 106, 170, 341, 577, 1139, 1310 |
| Bst6I | CTCTTC | 6 cut(s) | 161, 459, 766, 830, 1355, 1437 |
| BstACI | GRCGYC | 2 cut(s) | 1187, 1586 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 613 |
| BstBAI | YACGTR | 1 cut(s) | 1268 |
| BstBI | TTCGAA | 3 cut(s) | 948, 1032, 1161 |
| BstC8I | GCNNGC | 1 cut(s) | 1482 |
| BstDEI | CTNAG | 8 cut(s) | 549, 795, 972, 1175, 1317, 1548, 1631, 1804 |
| BstF5I | GGATG | 4 cut(s) | 508, 1087, 1531, 1701 |
| BstFNI | CGCG | 1 cut(s) | 65 |
| BstMAI | GTCTC | 7 cut(s) | 370, 424, 593, 1257, 1264, 1413, 1577 |
| BstMCI | CGRYCG | 1 cut(s) | 1394 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 71, 613, 1180 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 416 |
| BstSCI | CCNGG | 1 cut(s) | 834 |
| BstSNI | TACGTA | 1 cut(s) | 1268 |
| BstUI | CGCG | 1 cut(s) | 65 |
| BstV1I | GCAGC | 5 cut(s) | 118, 591, 943, 946, 1138 |
| BstV2I | GAAGAC | 2 cut(s) | 438, 1067 |
| BstX2I | RGATCY | 7 cut(s) | 352, 968, 1240, 1780, 1835, 1841, 1847 |
| BstYI | RGATCY | 7 cut(s) | 352, 968, 1240, 1780, 1835, 1841, 1847 |
| Bsu15I | ATCGAT | 1 cut(s) | 587 |
| BsuTUI | ATCGAT | 1 cut(s) | 587 |
| BtgZI | GCGATG | 4 cut(s) | 308, 1017, 1132, 1236 |
| BtsCI | GGATG | 4 cut(s) | 508, 1087, 1531, 1701 |
| BtsIMutI | CAGTG | 2 cut(s) | 792, 1144 |
| Cac8I | GCNNGC | 1 cut(s) | 1482 |
| CaiI | CAGNNNCTG | 1 cut(s) | 959 |
| Cfr10I | RCCGGY | 2 cut(s) | 539, 1701 |
| Cfr13I | GGNCC | 1 cut(s) | 1636 |
| ClaI | ATCGAT | 1 cut(s) | 587 |
| CseI | GACGC | 3 cut(s) | 503, 610, 1195 |
| Csp6I | GTAC | 7 cut(s) | 371, 399, 578, 1265, 1591, 1680, 1869 |
| CspAI | ACCGGT | 1 cut(s) | 1701 |
| CviAII | CATG | 3 cut(s) | 687, 752, 1439 |
| CviQI | GTAC | 7 cut(s) | 371, 399, 578, 1265, 1591, 1680, 1869 |
| DdeI | CTNAG | 8 cut(s) | 549, 795, 972, 1175, 1317, 1548, 1631, 1804 |
| DraI | TTTAAA | 1 cut(s) | 330 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1896 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1896 |
| Eam1104I | CTCTTC | 6 cut(s) | 161, 459, 766, 830, 1355, 1437 |
| EarI | CTCTTC | 6 cut(s) | 161, 459, 766, 830, 1355, 1437 |
| EciI | GGCGGA | 1 cut(s) | 1902 |
| Eco105I | TACGTA | 1 cut(s) | 1268 |
| Eco31I | GGTCTC | 1 cut(s) | 1264 |
| Eco47I | GGWCC | 1 cut(s) | 1636 |
| Eco57I | CTGAAG | 2 cut(s) | 1424, 1776 |
| EcoT22I | ATGCAT | 1 cut(s) | 228 |
| Esp3I | CGTCTC | 4 cut(s) | 593, 1257, 1413, 1577 |
| FaeI | CATG | 3 cut(s) | 690, 755, 1442 |
| FaqI | GGGAC | 1 cut(s) | 1649 |
| FatI | CATG | 3 cut(s) | 686, 751, 1438 |
| FauNDI | CATATG | 1 cut(s) | 1711 |
| FbaI | TGATCA | 1 cut(s) | 748 |
| FblI | GTMKAC | 1 cut(s) | 1397 |
| Fnu4HI | GCNGC | 7 cut(s) | 132, 605, 957, 960, 1152, 1216, 1219 |
| FokI | GGATG | 4 cut(s) | 515, 1074, 1538, 1708 |
| Fsp4HI | GCNGC | 7 cut(s) | 132, 605, 957, 960, 1152, 1216, 1219 |
| FspBI | CTAG | 3 cut(s) | 414, 993, 1797 |
| GluI | GCNGC | 7 cut(s) | 132, 605, 957, 960, 1152, 1216, 1219 |
| HgaI | GACGC | 3 cut(s) | 503, 610, 1195 |
| Hin1I | GRCGYC | 2 cut(s) | 1187, 1586 |
| Hin1II | CATG | 3 cut(s) | 690, 755, 1442 |
| HincII | GTYRAC | 3 cut(s) | 244, 864, 1398 |
| HindII | GTYRAC | 3 cut(s) | 244, 864, 1398 |
| HindIII | AAGCTT | 2 cut(s) | 299, 1478 |
| HpaI | GTTAAC | 2 cut(s) | 244, 864 |
| HphI | GGTGA | 4 cut(s) | 743, 988, 1291, 1462 |
| Hpy166II | GTNNAC | 3 cut(s) | 244, 864, 1398 |
| Hpy8I | GTNNAC | 3 cut(s) | 244, 864, 1398 |
| HpyAV | CCTTC | 5 cut(s) | 258, 803, 1132, 1399, 1441 |
| HpyCH4III | ACNGT | 6 cut(s) | 106, 170, 341, 577, 1139, 1310 |
| HpyCH4IV | ACGT | 8 cut(s) | 373, 1104, 1267, 1332, 1374, 1586, 1652, 1891 |
| HpyCH4V | TGCA | 5 cut(s) | 226, 286, 607, 616, 1709 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 71, 613, 1180 |
| HpyF3I | CTNAG | 8 cut(s) | 549, 795, 972, 1175, 1317, 1548, 1631, 1804 |
| HpySE526I | ACGT | 8 cut(s) | 373, 1104, 1267, 1332, 1374, 1586, 1652, 1891 |
| Hsp92I | GRCGYC | 2 cut(s) | 1187, 1586 |
| Hsp92II | CATG | 3 cut(s) | 690, 755, 1442 |
| Kpn2I | TCCGGA | 5 cut(s) | 868, 1234, 1838, 1844, 1850 |
| Ksp22I | TGATCA | 1 cut(s) | 748 |
| KspAI | GTTAAC | 2 cut(s) | 244, 864 |
| LguI | GCTCTTC | 1 cut(s) | 459 |
| LmnI | GCTCC | 1 cut(s) | 812 |
| Lsp1109I | GCAGC | 5 cut(s) | 118, 591, 943, 946, 1138 |
| LweI | GCATC | 3 cut(s) | 213, 235, 994 |
| MaeI | CTAG | 3 cut(s) | 414, 993, 1797 |
| MaeII | ACGT | 8 cut(s) | 373, 1104, 1267, 1332, 1374, 1586, 1652, 1891 |
| MaeIII | GTNAC | 3 cut(s) | 193, 443, 1100 |
| MflI | RGATCY | 7 cut(s) | 352, 968, 1240, 1780, 1835, 1841, 1847 |
| MluCI | AATT | 4 cut(s) | 704, 719, 1111, 1768 |
| MlyI | GAGTC | 5 cut(s) | 990, 1057, 1090, 1393, 1666 |
| MmeI | TCCRAC | 4 cut(s) | 168, 516, 1544, 1702 |
| Mph1103I | ATGCAT | 1 cut(s) | 228 |
| MroI | TCCGGA | 5 cut(s) | 868, 1234, 1838, 1844, 1850 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1858 |
| MseI | TTAA | 6 cut(s) | 243, 329, 773, 863, 1383, 1644 |
| MspA1I | CMGCKG | 3 cut(s) | 74, 956, 1823 |
| MspR9I | CCNGG | 1 cut(s) | 836 |
| Mva1269I | GAATGC | 1 cut(s) | 560 |
| MvnI | CGCG | 1 cut(s) | 65 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 71, 613, 1180 |
| NciI | CCSGG | 1 cut(s) | 836 |
| NdeI | CATATG | 1 cut(s) | 1711 |
| NlaIII | CATG | 3 cut(s) | 690, 755, 1442 |
| NlaIV | GGNNCC | 4 cut(s) | 1637, 1837, 1843, 1849 |
| NmeAIII | GCCGAG | 1 cut(s) | 978 |
| NsiI | ATGCAT | 1 cut(s) | 228 |
| NspV | TTCGAA | 3 cut(s) | 948, 1032, 1161 |
| PciSI | GCTCTTC | 1 cut(s) | 459 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1064, 1888 |
| PctI | GAATGC | 1 cut(s) | 560 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1858 |
| Pfl23II | CGTACG | 1 cut(s) | 577 |
| PfoI | TCCNGGA | 1 cut(s) | 834 |
| PinAI | ACCGGT | 1 cut(s) | 1701 |
| PkrI | GCNGC | 7 cut(s) | 133, 606, 958, 961, 1153, 1217, 1220 |
| Ple19I | CGATCG | 1 cut(s) | 1394 |
| PleI | GAGTC | 5 cut(s) | 990, 1057, 1090, 1393, 1665 |
| PpsI | GAGTC | 5 cut(s) | 990, 1057, 1090, 1393, 1665 |
| Ppu21I | YACGTR | 1 cut(s) | 1268 |
| PshAI | GACNNNNGTC | 1 cut(s) | 416 |
| PsiI | TTATAA | 1 cut(s) | 570 |
| PspLI | CGTACG | 1 cut(s) | 577 |
| PspN4I | GGNNCC | 4 cut(s) | 1637, 1837, 1843, 1849 |
| PspPI | GGNCC | 1 cut(s) | 1636 |
| PstNI | CAGNNNCTG | 1 cut(s) | 959 |
| PsuI | RGATCY | 7 cut(s) | 352, 968, 1240, 1780, 1835, 1841, 1847 |
| PvuI | CGATCG | 1 cut(s) | 1394 |
| PvuII | CAGCTG | 3 cut(s) | 74, 956, 1823 |
| RsaI | GTAC | 7 cut(s) | 372, 400, 579, 1266, 1592, 1681, 1870 |
| RsaNI | GTAC | 7 cut(s) | 371, 399, 578, 1265, 1591, 1680, 1869 |
| SalI | GTCGAC | 1 cut(s) | 1396 |
| SapI | GCTCTTC | 1 cut(s) | 459 |
| SaqAI | TTAA | 6 cut(s) | 243, 329, 773, 863, 1383, 1644 |
| SatI | GCNGC | 7 cut(s) | 132, 605, 957, 960, 1152, 1216, 1219 |
| Sau96I | GGNCC | 1 cut(s) | 1636 |
| ScaI | AGTACT | 1 cut(s) | 400 |
| SchI | GAGTC | 5 cut(s) | 990, 1057, 1090, 1393, 1666 |
| ScrFI | CCNGG | 1 cut(s) | 836 |
| SfaNI | GCATC | 3 cut(s) | 213, 235, 994 |
| SfuI | TTCGAA | 3 cut(s) | 948, 1032, 1161 |
| SinI | GGWCC | 1 cut(s) | 1636 |
| SmlI | CTYRAG | 2 cut(s) | 509, 804 |
| SmoI | CTYRAG | 2 cut(s) | 509, 804 |
| SnaBI | TACGTA | 1 cut(s) | 1268 |
| SpeI | ACTAGT | 1 cut(s) | 413 |
| Sse9I | AATT | 4 cut(s) | 704, 719, 1111, 1768 |
| SsiI | CCGC | 5 cut(s) | 65, 962, 1215, 1218, 1887 |
| SspMI | CTAG | 3 cut(s) | 414, 993, 1797 |
| StyD4I | CCNGG | 1 cut(s) | 834 |
| TaaI | ACNGT | 6 cut(s) | 106, 170, 341, 577, 1139, 1310 |
| TaiI | ACGT | 8 cut(s) | 376, 1107, 1270, 1335, 1377, 1589, 1655, 1894 |
| TasI | AATT | 4 cut(s) | 704, 719, 1111, 1768 |
| TatI | WGTACW | 1 cut(s) | 398 |
| TauI | GCSGC | 2 cut(s) | 1218, 1221 |
| Tru1I | TTAA | 6 cut(s) | 243, 329, 773, 863, 1383, 1644 |
| Tru9I | TTAA | 6 cut(s) | 243, 329, 773, 863, 1383, 1644 |
| TscAI | CASTG | 2 cut(s) | 799, 1144 |
| TseI | GCWGC | 5 cut(s) | 131, 604, 956, 959, 1151 |
| TspDTI | ATGAA | 9 cut(s) | 308, 311, 626, 915, 1076, 1124, 1239, 1455, 1712 |
| TspGWI | ACGGA | 4 cut(s) | 229, 595, 1040, 1538 |
| TspRI | CASTG | 2 cut(s) | 799, 1144 |
| VpaK11BI | GGWCC | 1 cut(s) | 1636 |
| XbaI | TCTAGA | 1 cut(s) | 1796 |
| XmiI | GTMKAC | 1 cut(s) | 1397 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1858 |
| XspI | CTAG | 3 cut(s) | 414, 993, 1797 |
| ZraI | GACGTC | 1 cut(s) | 1587 |
| ZrmI | AGTACT | 1 cut(s) | 400 |
| Zsp2I | ATGCAT | 1 cut(s) | 228 |